Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 49
Filter
Add more filters

Country/Region as subject
Publication year range
1.
Environ Res ; 231(Pt 1): 116062, 2023 Aug 15.
Article in English | MEDLINE | ID: mdl-37149028

ABSTRACT

Nitrogen (N) and phosphorous (P) removal by a single bacterium could improve the biological reaction efficiency and reduce the operating cost and complexity in wastewater treatment plants (WWTPs). Here, an isolated strain was identified as Pseudomonas mendocina SCZ-2 and showed high performance of heterotrophic nitrification (HN) and aerobic denitrification (AD) without intermediate accumulation. During the AD process, the nitrate removal efficiency and rate reached a maximum of 100% and 47.70 mg/L/h, respectively, under optimal conditions of sodium citrate as carbon source, a carbon-to-nitrogen ratio of 10, a temperature of 35 °C, and shaking a speed of 200 rpm. Most importantly, the strain SCZ-2 could rapidly and simultaneously eliminate N and P with maximum NH4+-N, NO3--N, NO2--N, and PO43--P removal rates of 14.38, 17.77, 20.13 mg N/L/h, and 2.93 mg P/L/h, respectively. Both the N and P degradation curves matched well with the modified Gompertz model. Moreover, the amplification results of functional genes, whole genome sequencing, and enzyme activity tests provided theoretical support for simultaneous N and P removal pathways. This study deepens our understanding of the role of HN-AD bacteria and provides more options for simultaneous N and P removal from actual sewage.


Subject(s)
Denitrification , Pseudomonas mendocina , Pseudomonas mendocina/metabolism , Nitrogen/metabolism , Aerobiosis , Nitrification , Phosphorus , Carbon , Nitrites
2.
Appl Environ Microbiol ; 87(11)2021 05 11.
Article in English | MEDLINE | ID: mdl-33741630

ABSTRACT

The widely prescribed pharmaceutical metformin and its main metabolite, guanylurea, are currently two of the most common contaminants in surface and wastewater. Guanylurea often accumulates and is poorly, if at all, biodegraded in wastewater treatment plants. This study describes Pseudomonas mendocina strain GU, isolated from a municipal wastewater treatment plant, using guanylurea as its sole nitrogen source. The genome was sequenced with 36-fold coverage and mined to identify guanylurea degradation genes. The gene encoding the enzyme initiating guanylurea metabolism was expressed, and the enzyme was purified and characterized. Guanylurea hydrolase, a newly described enzyme, was shown to transform guanylurea to one equivalent (each) of ammonia and guanidine. Guanidine also supports growth as a sole nitrogen source. Cell yields from growth on limiting concentrations of guanylurea revealed that metabolism releases all four nitrogen atoms. Genes encoding complete metabolic transformation were identified bioinformatically, defining the pathway as follows: guanylurea to guanidine to carboxyguanidine to allophanate to ammonia and carbon dioxide. The first enzyme, guanylurea hydrolase, is a member of the isochorismatase-like hydrolase protein family, which includes biuret hydrolase and triuret hydrolase. Although homologs, the three enzymes show distinct substrate specificities. Pairwise sequence comparisons and the use of sequence similarity networks allowed fine structure discrimination between the three homologous enzymes and provided insights into the evolutionary origins of guanylurea hydrolase.IMPORTANCE Metformin is a pharmaceutical most prescribed for type 2 diabetes and is now being examined for potential benefits to COVID-19 patients. People taking the drug pass it largely unchanged, and it subsequently enters wastewater treatment plants. Metformin has been known to be metabolized to guanylurea. The levels of guanylurea often exceed that of metformin, leading to the former being considered a "dead-end" metabolite. Metformin and guanylurea are water pollutants of emerging concern, as they persist to reach nontarget aquatic life and humans, the latter if it remains in treated water. The present study has identified a Pseudomonas mendocina strain that completely degrades guanylurea. The genome was sequenced, and the genes involved in guanylurea metabolism were identified in three widely separated genomic regions. This knowledge advances the idea that guanylurea is not a dead-end product and will allow for bioinformatic identification of the relevant genes in wastewater treatment plant microbiomes and other environments subjected to metagenomic sequencing.


Subject(s)
Bacterial Proteins/metabolism , Guanidine/analogs & derivatives , Hydrolases/metabolism , Metabolic Networks and Pathways , Metformin/metabolism , Urea/analogs & derivatives , Water Pollutants, Chemical/metabolism , Ammonia/metabolism , Bacterial Proteins/genetics , Biodegradation, Environmental , Biomineralization , Genome, Bacterial/genetics , Guanidine/metabolism , Hydrolases/genetics , Multigene Family , Pseudomonas mendocina/genetics , Pseudomonas mendocina/isolation & purification , Pseudomonas mendocina/metabolism , Substrate Specificity , Urea/metabolism , Wastewater/microbiology
3.
J Basic Microbiol ; 61(4): 351-361, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33448070

ABSTRACT

This study focuses on analyzing the protein expression pattern of intracellular proteins when Pseudomonas mendocina SMSKVR-3 exposed to 300 mM of arsenate to find out the proteins that are overexpressed or exclusively expressed in response to arsenate. The sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis of protein expression at different time intervals showed the highest number of protein bands (14) that are overexpressed at 8 h of the time interval. It was also observed that treatment with at least 200 mM of As(V) is required to induce a difference in protein expression. Two-dimensional (2D)-PAGE analysis of 8-h sample exhibited 146 unique spots, 45 underexpressed, and 46 overexpressed spots in arsenate-treated sample. Based on the highest percent volume and fold change, three unique spots and one overexpressed spot were selected and analyzed by matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF/TOF) mass spectrometry (MS) analysis followed by the MASCOT search. These proteins were identified as ribosome-recycling factor (20.13 kDa), polyphosphate:ADP/GDP phosphotransferase (40.88 kDa), ribonuclease P protein component (14.96 kDa) and cobalt-precorrin-5B C(1)-methyltransferase (38.43 kDa) with MASCOT score of 54, 81, 94, and 100, respectively. All of these proteins help the bacteria to overcome arsenate stress.


Subject(s)
Arsenates/metabolism , Arsenates/toxicity , Pseudomonas mendocina/drug effects , Pseudomonas mendocina/metabolism , Bacterial Proteins/metabolism , Electrophoresis, Gel, Two-Dimensional , Electrophoresis, Polyacrylamide Gel , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
4.
Ecotoxicol Environ Saf ; 187: 109843, 2020 Jan 15.
Article in English | MEDLINE | ID: mdl-31678701

ABSTRACT

Polycyclic aromatic hydrocarbons (PAH) contained in creosote oil are particularly difficult to remove from the soil environment. Their hydrophobic character and low bioavailability to soil microorganisms affects their rate of biodegradation. This study was performed on samples of soil that were (for over forty years) subjected to contamination with creosote oil, and their metagenome and physicochemical properties were characterized. Moreover, the study was undertaken to evaluate the biodegradation of PAHs by autochthonous consortia as well as by selected bacteria strains isolated from long-term contaminated industrial soil. From among the isolated microorganisms, the most effective in biodegrading the contaminants were the strains Pseudomonas mendocina and Brevundimonas olei. They were able to degrade more than 60% of the total content of PAHs during a 28-day test. The biodegradation of these compounds using AT7 dispersant was enhanced only by Serratia marcescens strain. Moreover, the addition of AT7 improved the effectiveness of fluorene and acenaphthene biodegradation by Serratia marcescens 6-fold. Our results indicated that long-term contact with aromatic compounds induced the bacterial strains to use the PAHs as a source of carbon and energy. We observed that supplementation with surfactants does not increase the efficiency of hydrocarbon biodegradation.


Subject(s)
Caulobacteraceae/isolation & purification , Creosote/analysis , Polycyclic Aromatic Hydrocarbons/analysis , Pseudomonas mendocina/isolation & purification , Soil Microbiology , Soil Pollutants/analysis , Biodegradation, Environmental , Caulobacteraceae/metabolism , Environmental Monitoring , Industry , Poland , Pseudomonas mendocina/metabolism , Soil/chemistry
5.
Appl Microbiol Biotechnol ; 103(4): 1713-1724, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30610286

ABSTRACT

Polyhydroxyalkanoates (PHAs) can be produced by microorganisms from renewable resources and are regarded as promising bioplastics to replace petroleum-based plastics. A medium-chain-length PHAs (mcl-PHA)-producing strain Pseudomonas mendocina NK-01 was isolated previously by our lab and its whole-genome sequence is currently available. Morphology engineering of manipulating cell morphology-related genes has been applied for enhanced accumulation of the intracellular biopolymer short-chain-length PHAs (scl-PHA). However, it has not yet been reported to improve the yield of mcl-PHA by morphology engineering so far. In this work, several well-characterized cell morphology-related genes, including the cell fission ring (Z-ring) location genes minCD, peptidoglycan degradation gene nlpD, actin-like cytoskeleton protein gene mreB, Z-ring formation gene ftsZ, and FtsZ inhibitor gene sulA, were intensively investigated for their impacts on the cell morphology and mcl-PHA accumulation by gene knockout and overexpression in P. mendocina NKU, a upp knockout mutant of P. mendocina NK-01. For a minCD knockout mutant P. mendocina NKU-∆minCD, the average cell length was obviously increased and the mcl-PHA production was improved. However, the nlpD knockout mutant had a shorter cell length and lower mcl-PHA yield compared with P. mendocina NKU. Overexpression of mreB in P. mendocina NKU resulted in spherical cells. When ftsZ was overexpressed in P. mendocina NKU, the cell division was accelerated and the mcl-PHA titer was improved. Furthermore, mreB, ftsZ, or sulA was overexpressed in P. mendocina NKU-∆minCD. Consequently, the mcl-PHA titers were all increased compared with P. mendocina NKU-∆minCD carrying the empty vector. The multiple fission pattern was finally achieved in ftsZ-overexpressing NKU-∆minCD. In this work, improved production of mcl-PHA in P. mendocina NK-01 has been achieved by morphology engineering. This work provides an alternative strategy to enhance mcl-PHA accumulation in mcl-PHA-producing strains.


Subject(s)
Metabolic Engineering/methods , Polyhydroxyalkanoates/metabolism , Pseudomonas mendocina/cytology , Pseudomonas mendocina/metabolism , Gene Deletion , Gene Expression , Pseudomonas mendocina/genetics
6.
Bioprocess Biosyst Eng ; 42(5): 853-866, 2019 May.
Article in English | MEDLINE | ID: mdl-30963243

ABSTRACT

Excess inorganic nitrogen in water poses a severe threat to enviroment. Removal of inorganic nitrogen by heterotrophic nitrifying-aerobic denitrifying microorganism is supposed to be a promising and applicable technology only if the removal rate can be maintained sufficiently high in real wastewater under various conditions, such as high concentration of salt and wide range of different nitrogen concentrations. Here, a new heterotrophic nitrifying-aerobic denitrifying bacterium was isolated and named as Pseudomonas mendocina TJPU04, which removes NH4+-N, NO3--N and NO2--N with average rate of 4.69, 5.60, 4.99 mg/L/h, respectively. It also maintains high nitrogen removal efficiency over a wide range of nitrogen concentrations. When concentration of NH4+-N, NO3--N and NO2--N was up to 150, 150 and 50 mg/L, 98%, 93%, and 100% removal efficiency could be obtained, respectively, after 30-h incubation under sterile condition. When it was applied under non-sterile condition, the ammonia removal efficiency was slightly lower than that under sterile condition. However, the nitrate and nitrite removal efficiencies under non-sterile condition were significantly higher than those under sterile condition. Strain TJPU04 also showed efficient nitrogen removal performance in the presence of high concentration of salt and nitrogen. In addition, the removal efficiencies of NH4+-N, NO3--N and TN in real wastewater were 91%, 52%, and 75%, respectively. These results suggest that strain TJPU04 is a promising candidate for efficient removal of inorganic nitrogen in wastewater treatment.


Subject(s)
Denitrification/physiology , Nitrification/physiology , Pseudomonas mendocina/metabolism , Ammonia/metabolism , Biodegradation, Environmental , Nitrates/metabolism , Nitrogen/metabolism
7.
Arch Microbiol ; 200(7): 1037-1048, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29644379

ABSTRACT

Mine tailings and wastewater generate man-made environments with several selective pressures, including the presence of heavy metals, arsenic and high cyanide concentrations, but severe nutritional limitations. Some oligotrophic and pioneer bacteria can colonise and grow in mine wastes containing a low concentration of organic matter and combined nitrogen sources. In this study, Pseudomonas mendocina P6115 was isolated from mine tailings in Durango, Mexico, and identified through a phylogenetic approach of 16S rRNA, gyrB, rpoB, and rpoD genes. Cell growth, cyanide consumption, and ammonia production kinetics in a medium with cyanide as sole nitrogen source showed that at the beginning, the strain grew assimilating cyanide, when cyanide was removed, ammonium was produced and accumulated in the culture medium. However, no clear stoichiometric relationship between both nitrogen sources was observed. Also, cyanide complexes were assimilated as nitrogen sources. Other phenotypic tasks that contribute to the strain's adaptation to a mine tailing environment included siderophores production in media with moderate amounts of heavy metals, arsenite and arsenate tolerance, and the capacity of oxidizing arsenite. P. mendocina P6115 harbours cioA/cioB and aoxB genes encoding for a cyanide-insensitive oxidase and an arsenite oxidase, respectively. This is the first report where P. mendocina is described as a cyanotrophic and arsenic oxidizing species. Genotypic and phenotypic tasks of P. mendocina P6115 autochthonous from mine wastes are potentially relevant for biological treatment of residues contaminated with cyanide and arsenic.


Subject(s)
Arsenic/metabolism , Cyanides/metabolism , Pseudomonas mendocina/metabolism , Soil Microbiology , Ammonia/metabolism , Arsenic/analysis , Arsenites/analysis , Arsenites/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Cyanides/analysis , Mexico , Mining , Oxidoreductases/genetics , Oxidoreductases/metabolism , Phylogeny , Pseudomonas mendocina/classification , Pseudomonas mendocina/genetics , Pseudomonas mendocina/isolation & purification , RNA, Ribosomal, 16S/genetics
8.
J Mater Sci Mater Med ; 29(12): 179, 2018 Nov 30.
Article in English | MEDLINE | ID: mdl-30506294

ABSTRACT

This study validated the utilization of triacylglycerides (TAGs) by Pseudomonas mendocina CH50, a wild type strain, resulting in the production of novel mcl-PHAs with unique physical properties. A PHA yield of 58% dcw was obtained using 20 g/L of coconut oil. Chemical and structural characterisation confirmed that the mcl-PHA produced was a terpolymer comprising of three different repeating monomer units, 3-hydroxyoctanoate, 3-hydroxydecanoate and 3-hydroxydodecanoate or P(3HO-3HD-3HDD). Bearing in mind the potential of P(3HO-3HD-3HDD) in biomedical research, especially in neural tissue engineering, in vitro biocompatibility studies were carried out using NG108-15 (neuronal) cells. Cell viability data confirmed that P(3HO-3HD-3HDD) supported the attachment and proliferation of NG108-15 and was therefore confirmed to be biocompatible in nature and suitable for neural regeneration.


Subject(s)
Coconut Oil , Polyhydroxyalkanoates/biosynthesis , Polyhydroxyalkanoates/chemistry , Pseudomonas mendocina/metabolism , Animals , Cell Culture Techniques , Cell Line, Tumor , Cell Proliferation , Cell Survival , Materials Testing , Mice , Rats
9.
J Basic Microbiol ; 58(11): 977-986, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30095175

ABSTRACT

Polyhydroxyalkanoates (PHAs) has been paid great attention because of its useful thermoplastic properties and complete degradation in various natural environments. But, at industrial level, the successful commercialization of PHAs is limited by the high production cost due to the expensive carbon source and recovery processes. Pseudomonas mendocina PSU cultured for 72 h in mineral salts medium (MSM) containing 2% (v/v) biodiesel liquid waste (BLW) produced 79.7 wt% poly(3-hydroxybutyrate) (PHB) at 72 h. In addition, this strain produced 43.6 wt% poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) with 8.6 HV mol% at 60 h when added with 0.3% sodium propionate. The synthesized intracellular PHA granules were recovered and purified by the recently reported biological method using mealworms. The weight average molecular weight (Mw ) and number average molecular weight (Mn ) of the biologically extracted PHA were higher than that from the chloroform extraction with comparable melting temperature (Tm ) and high purity. This study has successfully established a low-cost process to synthesize PHAs from BLW and subsequently confirmed the ability of mealworms to extract PHAs from various kinds of bacterial cells.


Subject(s)
Biofuels , Conservation of Natural Resources , Polyesters/isolation & purification , Polyesters/metabolism , Pseudomonas mendocina/metabolism , Tenebrio/metabolism , Waste Disposal, Fluid/methods , 3-Hydroxybutyric Acid/isolation & purification , 3-Hydroxybutyric Acid/metabolism , Animals , Biotransformation , Nitrogen/metabolism , Polyesters/chemistry , Polyhydroxyalkanoates/isolation & purification , Polyhydroxyalkanoates/metabolism , Pseudomonas mendocina/growth & development , Reproducibility of Results
10.
Appl Microbiol Biotechnol ; 101(9): 3829-3837, 2017 May.
Article in English | MEDLINE | ID: mdl-28091789

ABSTRACT

Bioremediation usually exhibits low removal efficiency toward hexane because of poor water solubility, which limits the mass transfer rate between the substrate and microorganism. This work aimed to enhance the hexane degradation rate by increasing cell surface hydrophobicity (CSH) of the degrader, Pseudomonas mendocina NX-1. The CSH of P. mendocina NX-1 was manipulated by treatment with starch and chitosan solution of varied concentrations, reaching a maximum hydrophobicity of 52%. The biodegradation of hexane conformed to the Haldane inhibition model, and the maximum degradation rate (ν max) of the cells with 52% CSH was 0.72 mg (mg cell)-1·h-1 in comparison with 0.47 mg (mg cell)-1·h-1 for cells with 15% CSH. The production of CO2 by high CSH cells was threefold higher than that by cells at 15% CSH within 30 h, and the cumulative rates of O2 consumption were 0.16 and 0.05 mL/h, respectively. High CSH was related to low negative charge carried by the cell surface and probably reduced the repulsive electrostatic interactions between hexane and microorganisms. The FT-IR spectra of cell envelopes demonstrated that the methyl chain was inversely proportional to increasing CSH values, but proteins exhibited a positive effect to CSH enhancement. The ratio of extracellular proteins and polysaccharides increased from 0.87 to 3.78 when the cells were treated with starch and chitosan, indicating their possible roles in increased CSH.


Subject(s)
Chitosan/metabolism , Hexanes/metabolism , Pseudomonas mendocina/chemistry , Pseudomonas mendocina/metabolism , Starch/metabolism , Surface Properties , Biotransformation , Carbon Dioxide/metabolism , Hydrophobic and Hydrophilic Interactions , Oxygen/metabolism , Pseudomonas mendocina/drug effects , Spectroscopy, Fourier Transform Infrared
11.
Water Environ Res ; 89(12): 2113-2121, 2017 Dec 01.
Article in English | MEDLINE | ID: mdl-29166993

ABSTRACT

The goals of this study were to assess the effectiveness of (1) enhancing octachlorinated dibenzo-p-dioxin (OCDD) biodegradation under aerobic conditions by Pseudomonas mendocina NSYSU (P. Mendocina NSYSU) with the addition of lecithin, and (2) inducing OCDD ring-cleavage genes by pentachlorophenol (PCP) and OCDD addition. P. Mendocina NSYSU could biodegrade OCDD via aerobic cometabolism and lecithin was used as a primary substrate. Approximately 74 and 67% of OCDD biodegradation was observed after 60 days of incubation with lecithin and glucose supplement, respectively. Lecithin was also used as the solubilization additive resulting in OCDD solubilization and enhanced bioavailability of OCDD to P. Mendocina NSYSU. Two intradiol and extradiol ring-cleavage dioxygenase genes (Pmen_0474 and Pmen_2526) were identified from gene analyses. Gene concentration was significantly enhanced after the inducement by PCP and OCDD. Higher gene inducement efficiency was obtained using PCP as the inducer, and Pmen_2526 played a more important role in OCDD biodegradation.


Subject(s)
Dioxins/metabolism , Environmental Restoration and Remediation/methods , Pentachlorophenol/metabolism , Pseudomonas mendocina/metabolism , Soil Pollutants/metabolism , Anaerobiosis , Biodegradation, Environmental
12.
Appl Microbiol Biotechnol ; 100(14): 6131-6139, 2016 Jul.
Article in English | MEDLINE | ID: mdl-27225470

ABSTRACT

Glucosylglycerols (GGs) are known as compatible solutes accumulated by some bacteria including cyanobacteria as well as higher plants for their adaptations to salt or desiccation stresses. Since being identified in Japanese sake, their physiological effects and potential applications on human health cares have been explored in the following 15 years. Several different synthesis methods have been successively developed for the production of GGs. However, the efficiency of GG synthesis, especially biological synthesis, is still low. With the recent advances in genome sequencing and synthetic biology tools, systematical screening of enzyme candidates and metabolic engineering approaches is necessary for improving GG synthesis efficiency. In this review, we will summarize GG structure information, protective effects on human skin and digestive system as well as industrial enzymes, together with their synthesis by chemical, enzymatic, and biological in vivo approaches in detail, and provide some prospects on improving GG production.


Subject(s)
Glucosides/biosynthesis , Glucosides/pharmacology , Industrial Microbiology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biodegradation, Environmental , Cell Membrane , Glucosides/chemistry , Metabolic Engineering , Protein Engineering , Pseudomonas mendocina/metabolism , Stenotrophomonas maltophilia/metabolism , Stress, Physiological , Synechococcus/genetics , Synechococcus/metabolism , Xanthomonadaceae/genetics , Xanthomonadaceae/metabolism
13.
Biosci Biotechnol Biochem ; 80(7): 1440-50, 2016 Jul.
Article in English | MEDLINE | ID: mdl-26981955

ABSTRACT

Conditions for the optimal production of polyhydroxyalkanoate (PHA) by Pseudomonas mendocina PSU using a biodiesel liquid waste (BLW) were determined by response surface methodology. These were an initial carbon to nitrogen ratio (C/N) of 40 (mole/mole), an initial pH of 7.0, and a temperature of 35 °C. A biomass and PHA concentration of 3.65 g/L and about 2.6 g/L (77% DCW), respectively, were achieved in a growth associated process using 20 g/L glycerol in the BLW after 36 h of exponential growth. The PHA monomer compositions were 3HB (3-hydroxybutyrate), a short-chain-length-PHA, and the medium-chain-length-PHA e.g. 3-hydroxyoctanoate and 3-hydroxydecanoate. Both the phbC and phaC genes were characterized. The phbC enzyme had not been previously detected in a Pseudomonas mendocina species. A 2.15 g/L of an exopolysaccharide, alginate, was also produced with a similar composition to that of other Pseudomonas species.


Subject(s)
Biofuels , Carbon/metabolism , Genes, Bacterial , Industrial Waste , Polyhydroxyalkanoates/biosynthesis , Pseudomonas mendocina/metabolism , 3-Hydroxybutyric Acid/biosynthesis , Alginates , Biodegradation, Environmental , Caprylates/metabolism , Decanoic Acids/metabolism , Factor Analysis, Statistical , Gene Expression , Glucuronic Acid/biosynthesis , Glycerol/metabolism , Hexuronic Acids , Hydrogen-Ion Concentration , Nitrogen/metabolism , Phylogeny , Pseudomonas mendocina/classification , Pseudomonas mendocina/genetics , Temperature
14.
Biotechnol Lett ; 38(2): 313-20, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26476529

ABSTRACT

OBJECTIVES: To enhance the biosynthesis of medium-chain-length polyhydroxyalkanoates (PHAMCL) from glucose in Pseudomonas mendocina NK-01, metabolic engineering strategies were used to block or enhance related pathways. RESULTS: Pseudomonas mendocina NK-01 produces PHAMCL from glucose. Besides the alginate oligosaccharide biosynthetic pathway proved by our previous study, UDP-D-glucose and dTDP-L-rhamnose biosynthetic pathways were identified. These might compete for glucose with the PHAMCL biosynthesis. First, the alg operon, galU and rmlC gene were deleted one by one, resulting in NK-U-1(∆alg), NK-U-2 (∆alg∆galU), NK-U-3(alg∆galU∆rmlC). After fermentation for 36 h, the cell dry weight (CDW) and PHAMCL production of these strains were determined. Compared with NK-U: 1) NK-U-1 produced elevated CDW (from 3.19 ± 0.16 to 3.5 ± 0.11 g/l) and equal PHAMCL (from 0.78 ± 0.06 to 0.79 ± 0.07 g/l); 2) NK-U-2 produced more CDW (from 3.19 ± 0.16 to 3.55 ± 0.23 g/l) and PHAMCL (from 0.78 ± 0.06 to 1.05 ± 0.07 g/l); 3) CDW and PHAMCL dramatically decreased in NK-U-3 (1.53 ± 0.21 and 0.41 ± 0.09 g/l, respectively). Additionally, the phaG gene was overexpressed in strain NK-U-2. Although CDW of NK-U-2/phaG decreased to 1.29 ± 0.2 g/l, PHA titer (%CDW) significantly increased from 24.5 % up to 51.2 %. CONCLUSION: The PHAMCL biosynthetic pathway was enhanced by blocking branched metabolic pathways in combination with overexpressing phaG gene.


Subject(s)
Glucose/metabolism , Metabolic Engineering/methods , Polyhydroxyalkanoates/biosynthesis , Pseudomonas mendocina/genetics , Pseudomonas mendocina/metabolism , Gene Expression , Gene Knockout Techniques , Metabolic Networks and Pathways/genetics
15.
Biotechnol Appl Biochem ; 62(2): 260-7, 2015.
Article in English | MEDLINE | ID: mdl-24919602

ABSTRACT

We optimized the culture medium for 3-hydroxycarboxylic acid production by Pseudomonas mendocina DS-04-T-biodegraded polyhydroxybutyrate (PHB) using the Plackett-Burman design, steepest ascent method, and Box-Behnken design. The optimized concentrations of the constituents of the culture medium were as follows: PHB (7.57 g/L), NH4 Cl (5.0 g/L), KH2 PO4 (2.64 g/L), Na2 HPO4 ·12H2 O (12 g/L), MgSO4 ·7H2 O (0.5 g/L), and CaCl2 ·2H2 O (5 mg/L). The yield of 3-hydroxycarboxylic acid obtained using the optimized culture medium was 56.8 ± 1.64%, which was 2.5-fold higher than that obtained when the unoptimized culture medium was used.


Subject(s)
Biodegradable Plastics/metabolism , Carboxylic Acids/metabolism , Culture Media/chemistry , Culture Media/metabolism , Hydroxybutyrates/metabolism , Polyesters/metabolism , Pseudomonas mendocina/metabolism , Bioreactors/microbiology , Hydroxybutyrates/chemistry , Polyesters/chemistry , Pseudomonas mendocina/growth & development
16.
Environ Sci Technol ; 48(15): 8664-70, 2014.
Article in English | MEDLINE | ID: mdl-24978298

ABSTRACT

This research compared the bioavailability of Fe associated with two forms of the hydrous Fe oxyhydroxide nanomineral ferrihydrite (Fh)--the smaller (1-3 nm), less ordered 2-line (2L) phase and the slightly larger, (2-6 nm) more ordered 6-line (6L) phase--to the common aerobic soil bacterium Pseudomonas mendocina ymp. P. mendocina can acquire Fe from minerals using high-affinity Fe(III) binding ligands known as siderophores and a cell-associated metalloreductase that requires direct cell-mineral contact. Wild-type (WT) P. mendocina and a siderophore(-) mutant were used to monitor siderophore -related and -independent Fe acquisition from 2L and 6L Fh. Both WT and mutant strains acquired Fe from Fh, although Fe acquisition and growth were substantially greater on the 2L phase than on the 6L phase. In the absence of bacteria, copious quantities of the biofilm exopolysaccharide alginate slightly promoted dissolution of 2L and 6L Fh. In biotic experiments, added alginate slightly enhanced growth and Fe acquisition from 6L Fh but not from 2L Fh. Recent research has led to an emerging understanding that Fe-oxide nanoparticle structure, stability, and reactivity are highly sensitive to size at the nanoscale; this research emphasizes how subtle differences in nanoparticle size-related properties can also affect bioavailability.


Subject(s)
Alginates , Ferric Compounds/metabolism , Iron/metabolism , Pseudomonas mendocina/metabolism , Siderophores/metabolism , Bacteria/metabolism , Biological Availability , Glucuronic Acid , Hexuronic Acids , Minerals/metabolism , Nanoparticles/metabolism , Pseudomonas mendocina/growth & development
17.
Bioresour Technol ; 393: 130047, 2024 Feb.
Article in English | MEDLINE | ID: mdl-37989421

ABSTRACT

A salt-tolerant strain, Pseudomonas mendocina A4, was isolated from brackish-water ponds showing simultaneous heterotrophic nitrification-aerobic denitrification and phosphorus removal capability. The optimal conditions for nitrogen and phosphate removal of strain A4 were pH 7-8, carbon/nitrogen ratio 10, phosphorus/nitrogen ratio 0.2, temperature 30 °C, and salinity range of 0-5 % using sodium succinate as the carbon source. The nitrogen and phosphate removal efficiencies were 96-100 % and 88-96 % within 24 h, respectively. The nitrogen and phosphate removal processes were matched with the modified Gompertz model, and the underlying mechanisms were confirmed by the activities of key metabolic enzymes. Under 10 % salinity, the immobilization technology was employed to enhance the nitrogen and phosphate removal efficiencies of strain A4, achieving 87 % and 76 %, respectively. These findings highlight the potential application of strain A4 in both freshwater and marine culture wastewater treatment.


Subject(s)
Denitrification , Nitrogen Radioisotopes , Pseudomonas mendocina , Phosphates , Pseudomonas mendocina/metabolism , Nitrogen/metabolism , Aerobiosis , Nitrification , Phosphorus , Heterotrophic Processes , Carbon , Nitrites/chemistry
18.
Environ Sci Technol ; 47(23): 13644-51, 2013.
Article in English | MEDLINE | ID: mdl-24219116

ABSTRACT

A waste slip-stream is generated from the reclaiming process of monoethanolamine (MEA) based Post-Combustion Capture (PCC). It mainly consists of MEA itself, ammonium, heat-stable salts (HSS), carbamate polymers, and water. In this study, the waste quantity and nature are characterized for Fluor's Econamine FGSM coal-fired CO2 capture base case. Waste management options, including reuse, recycling, treatment, and disposal, are investigated due to the need for a more environmentally sound handling. Regulations, economic potential, and associated costs are also evaluated. The technical, economic, and regulation assessment suggests waste reuse for NOx scrubbing. Moreover, a high thermal condition is deemed as an effective technique for waste destruction, leading to considerations of waste recycling into a coal burner or incineration. As a means of treatment, three secondary-biological processes covering Complete-Mix Activated Sludge (CMAS), oxidation ditch, and trickling filter are designed to meet the wastewater standards in the United Arab Emirates (UAE). From the economic point of view, the value of waste as a NOx scrubbing agent is 6,561,600-7,348,992 USD/year. The secondary-biological treatment cost is 0.017-0.02 USD/ton of CO2, while the cost of an on-site incinerator is 0.031 USD/ton of CO2 captured. In conclusion, secondary biological treatment is found to be the most economical option.


Subject(s)
Bioreactors , Carbon Dioxide/isolation & purification , Ethanolamine/chemistry , Global Warming/prevention & control , Recycling/methods , Waste Management/methods , Wastewater/chemistry , Biodegradation, Environmental , Carbon Dioxide/analysis , Coal/analysis , Escherichia coli K12/metabolism , Filtration , Government Regulation , Incineration/methods , Methylosinus trichosporium/metabolism , Mycobacterium/metabolism , Oxidation-Reduction , Pseudomonas mendocina/metabolism , Sewage/microbiology , United Arab Emirates , Waste Management/economics , Waste Management/legislation & jurisprudence
19.
Bioresour Technol ; 379: 129039, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37037332

ABSTRACT

A highly efficient aerobic denitrifying microbe was isolated from sewage sludge by using a denitrifier enrichment strategy based on decreasing carbon content. The microbe was identified as Pseudomonas mendocina HITSZ-D1 (hereafter, D1). Investigation of the conditions under which D1 grew and denitrified revealed that it performed good growth and nitrate removal performance under a wide range of conditions. In particular, D1 rapidly removed all types of inorganic nitrogen without accumulation of the intermediate products nitrite and nitrous oxide. Overall, D1 showed a total nitrogen removal efficiency >96% at a C/N ratio of 8. The biotransformation modes and fates of three typical types of inorganic nitrogen were also assessed. Moreover, D1 had significantly higher denitrification efficiency and enzyme activities than other aerobic denitrifying microbes (Paracoccus denitrificans, Pseudomonas aeruginosa, and Pseudomonas putida). These results suggest that D1 has great potential for treating wastewater containing high concentrations of nitrogen.


Subject(s)
Nitrites , Pseudomonas mendocina , Nitrites/metabolism , Pseudomonas mendocina/metabolism , Sewage , Denitrification , Nitrates/metabolism , Nitrogen/metabolism , Nitrification , Aerobiosis
20.
Chemosphere ; 318: 137897, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36657580

ABSTRACT

The high hydrophobicity of n-hexane is the main reason why it is difficult to be removed biologically. In this study, the effects of bamboo-charcoal modified by bimetallic Fe/Pd (BBC) on n-hexane biodegradation by Pseudomonas mendocina NX-1 (PM) was investigated. The n-hexane removal efficiency was increased in the presence of BC. The highest n-hexane removal efficiency at 90.0% was achieved at 0.05 g L-1 BCE and 3 g L-1 NH4+ under pH 7.7 and 35 °C. Additionally, protein content (45.9 µg mL-1) and negative cell surface zeta potential (-26.4 mV) were increased during biodegradation process, with PM-BBC being 43.1 µg mL-1 and 19.1 mV. Bacterial growth was improved and maximum cell surface hydrophobicity was obtained after 20 h, which was 59.4% higher than the control with PM-BBC (37.7%) or PM (16.1%), showing biodegradation products of 1-butanol and acetic acid. The results indicate that BBC improved n-hexane biodegradation efficiency by promoting bacterial growth, reducing cell zeta potential, exposing hydrophobic proteins, and increasing cell surface hydrophobicity of bacterial strain NX-1. This investigation suggests that BBC-enhanced biodegradation can be promising to treat n-hexane-containing gas.


Subject(s)
Pseudomonas mendocina , Pseudomonas mendocina/metabolism , Charcoal/pharmacology , Charcoal/metabolism , Biodegradation, Environmental , Hexanes/metabolism
SELECTION OF CITATIONS
SEARCH DETAIL