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1.
Cell ; 184(12): 3318-3332.e17, 2021 06 10.
Article in English | MEDLINE | ID: mdl-34038702

ABSTRACT

Long-term subcellular intravital imaging in mammals is vital to study diverse intercellular behaviors and organelle functions during native physiological processes. However, optical heterogeneity, tissue opacity, and phototoxicity pose great challenges. Here, we propose a computational imaging framework, termed digital adaptive optics scanning light-field mutual iterative tomography (DAOSLIMIT), featuring high-speed, high-resolution 3D imaging, tiled wavefront correction, and low phototoxicity with a compact system. By tomographic imaging of the entire volume simultaneously, we obtained volumetric imaging across 225 × 225 × 16 µm3, with a resolution of up to 220 nm laterally and 400 nm axially, at the millisecond scale, over hundreds of thousands of time points. To establish the capabilities, we investigated large-scale cell migration and neural activities in different species and observed various subcellular dynamics in mammals during neutrophil migration and tumor cell circulation.


Subject(s)
Algorithms , Imaging, Three-Dimensional , Optics and Photonics , Tomography , Animals , Calcium/metabolism , Cell Line, Tumor , Cell Membrane/metabolism , Cell Movement , Drosophila , HeLa Cells , Humans , Larva/physiology , Liver/diagnostic imaging , Male , Mice, Inbred C57BL , Neoplasms/pathology , Rats, Sprague-Dawley , Signal-To-Noise Ratio , Subcellular Fractions/physiology , Time Factors , Zebrafish
2.
J Neuroinflammation ; 15(1): 77, 2018 Mar 13.
Article in English | MEDLINE | ID: mdl-29534751

ABSTRACT

BACKGROUND: The therapeutic efficacy of adipose-derived stem cells (ASCs) has been investigated for numerous clinical indications, including autoimmune and neurodegenerative diseases. Less is known using the crude adipose product called stromal vascular fraction (SVF) as therapy, although our previous studies demonstrated greater efficacy at late-stage disease compared to ASCs in the experimental autoimmune encephalomyelitis (EAE) mouse, a model of multiple sclerosis. In this study, SVF cells and ASCs were administered during the pathogenic progression, designated as early disease, to elucidate immunomodulatory mechanisms when high immune cell activities associated with autoimmune signaling occur. These implications are essential for clinical translation when considering timing of administration for cell therapies. METHODS: We investigated the effects of SVF cells and ASCs by analyzing the spleens, peripheral blood, and central nervous system tissues throughout the course of EAE disease following administration of SVF cells, ASCs, or vehicle. In vitro, immunomodulatory potentials of SVF cells and ASCs were measured when exposed to EAE-derived splenocytes. RESULTS: Interestingly, treatment with SVF cells and ASCs transiently enhanced the severity of disease directly after administration, substantiating this critical immunomodulatory signaling. More importantly, it was only the EAE mice treated with SVF cells that were able to overcome the advancing pathogenesis and showed improvements by the end of the study. The frequency of lesions in spinal cords following SVF treatment correlated with diminished activities of the T helper type 1 cells, known effector cells of this disease. Co-cultures with splenocytes isolated from EAE mice revealed transcripts of interleukin-10 and transforming growth factor-ß, known promoters of regulatory T cells, that were greatly expressed in SVF cells compared to ASCs, and expression levels of signaling mediators related to effector T cells were insignificant in both SVF cells and ASCs. CONCLUSION: This is the first evidence, to date, to elucidate a mechanism of action of SVF treatment in an inflammatory, autoimmune disease. Our data supports key immunomodulatory signaling between cell therapies and T cells in this T cell-mediated disease. Together, treatment with SVF mediated immunomodulatory effects that diminished effector cell activities, promoted regulatory T cells, and reduced neuroinflammation.


Subject(s)
Adipose Tissue/cytology , Encephalomyelitis, Autoimmune, Experimental/pathology , Encephalomyelitis, Autoimmune, Experimental/therapy , Stromal Cells/physiology , Subcellular Fractions/physiology , Th1 Cells/pathology , Animals , Antigens, Neoplasm/genetics , Antigens, Neoplasm/metabolism , Coculture Techniques , Disease Models, Animal , Encephalomyelitis, Autoimmune, Experimental/physiopathology , Female , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/metabolism , Gene Expression Regulation/physiology , Immunologic Factors/therapeutic use , Mesenchymal Stem Cell Transplantation , Mice , Mice, Inbred C57BL , Mice, Transgenic , Receptors, Interleukin-2/genetics , Receptors, Interleukin-2/metabolism , STAT1 Transcription Factor/genetics , STAT1 Transcription Factor/metabolism , Spinal Cord/metabolism , Spinal Cord/pathology , Stromal Cells/ultrastructure
3.
J Environ Sci (China) ; 73: 127-137, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30290861

ABSTRACT

Earthworms have the ability to accumulate of heavy metals, however, there was few studies that addressed the metals in earthworm at subcellular levels in fields. The distributions of metals (Cd, Cu, Zn, and Pb) in subcellular fractions (cytosol, debris, and granules) of earthworm Metaphire californica were investigated. The relationship between soil metals and earthworms were analyzed to explain its high plasticity to inhabit in situ contaminated soil of Hunan Province, south China. The concentration of Cd in subcellular compartments showed the same pattern as Cu in the order of cytosol > debris > granules. The distribution of Zn and Pb in earthworms indicated a similar propensity for different subcellular fractions that ranked as granules > debris > cytosol for Zn, and granules > cytosol > debris for Pb. The internal metal concentrations in earthworms increased with the soil metals (p<0.05). Significant positive correlations were found between soil Cd and Cd concentrations in cytosol and debris (p<0.01). Moreover, the soil Pb concentration significantly influenced the Pb concentrations in cytosol and debris (p<0.01), similar to that of Cd. The soil Cu concentrations was only associated with the Cu in granules (p<0.05). Soil Zn concentrations correlated with the Zn concentrations in each subcellular fraction (p<0.05). Our results provide insights into the variations of metals partitioning in earthworms at subcellular levels and the relationships of soil metals, which could be one of the detoxification strategies to adapt the long-term contaminated environment.


Subject(s)
Environmental Monitoring , Metals, Heavy/toxicity , Oligochaeta/physiology , Soil Pollutants/toxicity , Subcellular Fractions/physiology , Animals , China , Metals, Heavy/metabolism , Soil Pollutants/metabolism
4.
J Proteome Res ; 16(8): 3019-3029, 2017 08 04.
Article in English | MEDLINE | ID: mdl-28707887

ABSTRACT

Spatial-temporal regulation among proteins forms dynamic networks in cells. Coexistence in common cell compartments can improve biological reliability of the protein-protein interactions. However, this is usually overlooked by most proteomic studies and leads to unrealistic discoveries. In this paper, we systematically characterize the interaction localization diversity in the human protein interactome using the localization coefficient, a novel metric proposed for assessing how diversely the interactions localize among cell compartments. Our analysis reveals the following: (1) the subcellular networks of the nucleus, cytosol, and mitochondrion are dense but the interactions tend to localize in specific cell compartments, whereas the subnetworks of the secretory-pathway, membrane, and extracellular region are sparse but the interactions are diversely localized; (2) the housekeeping proteins tend to appear in multiple compartments, while the tissue-specific proteins present a relatively flat profile of localization breadth; (3) the autophagy proteins tend to diversely localize in multiple compartments, especially those with high connectivity, compared with the apoptosis proteins; (4) the proteins targeted by small-molecule drugs show no preference for compartments, whereas the proteins directed by antibody-based drugs tend to belong to transmembrane regions with a strong diversity. In summary, our analysis provides a comprehensive view of the subcellular localization for interacting proteins, demonstrates that localization diversity is an important feature of protein interactions, and shows its ability to highlight meaningful biological functions.


Subject(s)
Cell Compartmentation , Protein Interaction Maps/physiology , Proteome/analysis , Subcellular Fractions/chemistry , Humans , Intracellular Space/chemistry , Protein Interaction Mapping , Proteomics/methods , Spatio-Temporal Analysis , Subcellular Fractions/physiology
5.
Toxicol Appl Pharmacol ; 309: 24-36, 2016 10 15.
Article in English | MEDLINE | ID: mdl-27568863

ABSTRACT

Gentamicin, an aminoglycoside used to treat severe bacterial infections, may cause acute renal failure. In the renal cell line LLC-PK1, gentamicin accumulates in lysosomes, induces alterations of their permeability, and triggers the mitochondrial pathway of apoptosis via activation of caspase-9 and -3 and changes in Bcl-2 family proteins. Early ROS production in lysosomes has been associated with gentamicin induced lysosomal membrane permeabilization. In order to better understand the multiple interconnected pathways of gentamicin-induced apoptosis and ensuing renal cell toxicity, we investigated the effect of gentamicin on p53 and p21 levels. We also studied the potential effect of gentamicin on proteasome by measuring the chymotrypsin-, trypsin- and caspase-like activities, and on endoplasmic reticulum by determining phopho-eIF2α, caspase-12 activation and GRP78 and 94. We observed an increase in p53 levels, which was dependent on ROS production. Accumulation of p53 resulted in accumulation of p21 and of phospho-eIF2α. These effects could be related to an impairment of proteasome as we demonstrated an inhibition of trypsin-and caspase-like activities. Moderate endoplasmic reticulum stress could also participate to cellular toxicity induced by gentamicin, with activation of caspase-12 without change in GRP74 and GRP98. All together, these data provide new mechanistic insights into the apoptosis induced by aminoglycoside antibiotics on renal cell lines.


Subject(s)
Anti-Bacterial Agents/pharmacology , Apoptosis/drug effects , Endoplasmic Reticulum/metabolism , Gentamicins/pharmacology , Proteasome Endopeptidase Complex/metabolism , Subcellular Fractions/physiology , Tumor Suppressor Protein p53/metabolism , Animals , Apoptosis/physiology , Gentamicins/adverse effects , LLC-PK1 Cells , Molecular Chaperones/metabolism , Proto-Oncogene Proteins p21(ras)/metabolism , RNA, Small Interfering/genetics , Reactive Oxygen Species/metabolism , Sphingomyelin Phosphodiesterase/metabolism , Subcellular Fractions/metabolism , Swine , Tumor Suppressor Protein p53/genetics
6.
PLoS Comput Biol ; 11(10): e1004544, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26452000

ABSTRACT

This paper presents a framework for modelling biological tissues based on discrete particles. Cell components (e.g. cell membranes, cell cytoskeleton, cell nucleus) and extracellular matrix (e.g. collagen) are represented using collections of particles. Simple particle to particle interaction laws are used to simulate and control complex physical interaction types (e.g. cell-cell adhesion via cadherins, integrin basement membrane attachment, cytoskeletal mechanical properties). Particles may be given the capacity to change their properties and behaviours in response to changes in the cellular microenvironment (e.g., in response to cell-cell signalling or mechanical loadings). Each particle is in effect an 'agent', meaning that the agent can sense local environmental information and respond according to pre-determined or stochastic events. The behaviour of the proposed framework is exemplified through several biological problems of ongoing interest. These examples illustrate how the modelling framework allows enormous flexibility for representing the mechanical behaviour of different tissues, and we argue this is a more intuitive approach than perhaps offered by traditional continuum methods. Because of this flexibility, we believe the discrete modelling framework provides an avenue for biologists and bioengineers to explore the behaviour of tissue systems in a computational laboratory.


Subject(s)
Cell Physiological Phenomena , Extracellular Matrix/physiology , Mechanotransduction, Cellular/physiology , Models, Biological , Subcellular Fractions/physiology , Animals , Computer Simulation , Humans , Models, Statistical
7.
PLoS Comput Biol ; 11(7): e1004348, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26186202

ABSTRACT

Cell-fate asymmetry in the predivisional cell of Caulobacter crescentus requires that the regulatory protein DivL localizes to the new pole of the cell where it up-regulates CckA kinase, resulting in a gradient of CtrA~P across the cell. In the preceding stage of the cell cycle (the "stalked" cell), DivL is localized uniformly along the cell membrane and maintained in an inactive form by DivK~P. It is unclear how DivL overcomes inhibition by DivK~P in the predivisional cell simply by changing its location to the new pole. It has been suggested that co-localization of DivL with PleC phosphatase at the new pole is essential to DivL's activity there. However, there are contrasting views on whether the bifunctional enzyme, PleC, acts as a kinase or phosphatase at the new pole. To explore these ambiguities, we formulated a mathematical model of the spatiotemporal distributions of DivL, PleC and associated proteins (DivJ, DivK, CckA, and CtrA) during the asymmetric division cycle of a Caulobacter cell. By varying localization profiles of DivL and PleC in our model, we show how the physiologically observed spatial distributions of these proteins are essential for the transition from a stalked cell to a predivisional cell. Our simulations suggest that PleC is a kinase in predivisional cells, and that, by sequestering DivK~P, the kinase form of PleC enables DivL to be reactivated at the new pole. Hence, co-localization of PleC kinase and DivL is essential to establishing cellular asymmetry. Our simulations reproduce the experimentally observed spatial distribution and phosphorylation status of CtrA in wild-type and mutant cells. Based on the model, we explore novel combinations of mutant alleles, making predictions that can be tested experimentally.


Subject(s)
Caulobacter crescentus/cytology , Caulobacter crescentus/physiology , Cell Cycle Proteins/metabolism , Cell Cycle/physiology , Models, Biological , Subcellular Fractions/physiology , Computer Simulation , Spatio-Temporal Analysis , Subcellular Fractions/ultrastructure , Tissue Distribution
8.
J Neurosci ; 34(48): 15947-56, 2014 Nov 26.
Article in English | MEDLINE | ID: mdl-25429136

ABSTRACT

Regulated calcium signals play conserved instructive roles in neuronal repair, but how localized calcium stores are differentially mobilized, or might be directly manipulated, to stimulate regeneration within native contexts is poorly understood. We find here that localized calcium release from the endoplasmic reticulum via ryanodine receptor (RyR) channels is critical in stimulating initial regeneration following traumatic cellular damage in vivo. Using laser axotomy of single neurons in Caenorhabditis elegans, we find that mutation of unc-68/RyR greatly impedes both outgrowth and guidance of the regenerating neuron. Performing extended in vivo calcium imaging, we measure subcellular calcium signals within the immediate vicinity of the regenerating axon end that are sustained for hours following axotomy and completely eliminated within unc-68/RyR mutants. Finally, using a novel optogenetic approach to periodically photo-stimulate the axotomized neuron, we can enhance its regeneration. The enhanced outgrowth depends on both amplitude and temporal pattern of excitation and can be blocked by disruption of UNC-68/RyR. This demonstrates the exciting potential of emerging optogenetic technology to beneficially manipulate cell physiology in the context of neuronal regeneration and indicates a link to the underlying cellular calcium signal. Taken as a whole, our findings define a specific localized calcium signal mediated by RyR channel activity that stimulates regenerative outgrowth, which may be dynamically manipulated for beneficial neurotherapeutic effects.


Subject(s)
Calcium/metabolism , Nerve Regeneration/physiology , Neurons/physiology , Optogenetics/methods , Ryanodine Receptor Calcium Release Channel/physiology , Animals , Animals, Genetically Modified , Caenorhabditis elegans , Channelrhodopsins , Mechanotransduction, Cellular/physiology , Subcellular Fractions/physiology
9.
Biochem J ; 458(2): 267-80, 2014 Mar 01.
Article in English | MEDLINE | ID: mdl-24354850

ABSTRACT

DM1 (myotonic dystrophy type 1) is caused by elongation of a CTG repeat in the DMPK (dystrophia myotonica-protein kinase) gene. mRNA transcripts containing these CUGexp (CUG expansion) repeats form accumulations, or foci, in the nucleus of the cell. The pathogenesis of DM1 is proposed to result from inappropriate patterns of alternative splicing caused by sequestration of the developmentally regulated alternative splicing factor MBNL1 (muscleblind-like 1) by these foci. Since eye lens cataract is a common feature of DM1 we have examined the distribution and dynamics of MBNL1 in lens epithelial cell lines derived from patients with DM1. The results of the present study demonstrate that only a small proportion of nuclear MBNL1 accumulates in CUGexp pre-mRNA foci. MBNL1 is, however, highly mobile and changes localization in response to altered transcription and splicing activity. Moreover, immunolocalization studies in lens sections suggest that a change in MBNL1 distribution is important during lens growth and differentiation. Although these data suggest that the loss of MBNL1 function due to accumulation in foci is an unlikely explanation for DM1 symptoms in the lens, they do demonstrate a strong relationship between the subcellular MBNL1 localization and pathways of cellular differentiation, providing an insight into the sensitivity of the lens to changes in MBNL1 distribution.


Subject(s)
Lens, Crystalline/cytology , Lens, Crystalline/growth & development , Myotonic Dystrophy/genetics , Myotonic Dystrophy/pathology , RNA-Binding Proteins/genetics , Transcription, Genetic/genetics , Alternative Splicing/genetics , Animals , Cells, Cultured , Epithelial Cells/physiology , Humans , Molecular Dynamics Simulation , Subcellular Fractions/physiology , Swine
10.
J Biomech Eng ; 137(6): 061009, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25782164

ABSTRACT

Mechanical loading influences the structural and mechanical properties of articular cartilage. The cartilage matrix protein collagen II essentially determines the tensile properties of the tissue and is adapted in response to loading. The collagen II network is stabilized by the collagen II-binding cartilage oligomeric matrix protein (COMP), collagen IX, and matrilin-3. However, the effect of mechanical loading on these extracellular matrix proteins is not yet understood. Therefore, the aim of this study was to investigate if and how chondrocytes assemble the extracellular matrix proteins collagen II, COMP, collagen IX, and matrilin-3 in response to mechanical loading. Primary murine chondrocytes were applied to cyclic tensile strain (6%, 0.5 Hz, 30 min per day at three consecutive days). The localization of collagen II, COMP, collagen IX, and matrilin-3 in loaded and unloaded cells was determined by immunofluorescence staining. The messenger ribo nucleic acid (mRNA) expression levels and synthesis of the proteins were analyzed using reverse transcription-polymerase chain reaction (RT-PCR) and western blots. Immunofluorescence staining demonstrated that the pattern of collagen II distribution was altered by loading. In loaded chondrocytes, collagen II containing fibrils appeared thicker and strongly co-stained for COMP and collagen IX, whereas the collagen network from unloaded cells was more diffuse and showed minor costaining. Further, the applied load led to a higher amount of COMP in the matrix, determined by western blot analysis. Our results show that moderate cyclic tensile strain altered the assembly of the extracellular collagen network. However, changes in protein amount were only observed for COMP, but not for collagen II, collagen IX, or matrilin-3. The data suggest that the adaptation to mechanical loading is not always the result of changes in RNA and/or protein expression but might also be the result of changes in matrix assembly and structure.


Subject(s)
Cartilage, Articular/physiology , Chondrocytes/physiology , Extracellular Matrix Proteins/physiology , Extracellular Matrix/physiology , Mechanotransduction, Cellular/physiology , Subcellular Fractions/physiology , Animals , Animals, Newborn , Cartilage, Articular/cytology , Cells, Cultured , Chondrocytes/cytology , Gene Expression Regulation/physiology , Mice , Mice, Inbred C57BL , Stress, Mechanical , Tensile Strength/physiology
11.
J Neurosci ; 33(26): 10661-6, 2013 Jun 26.
Article in English | MEDLINE | ID: mdl-23804089

ABSTRACT

Hearing over a wide range of sound intensities is thought to require complementary coding by functionally diverse spiral ganglion neurons (SGNs), each changing activity only over a subrange. The foundations of SGN diversity are not well understood but likely include differences among their inputs: the presynaptic active zones (AZs) of inner hair cells (IHCs). Here we studied one candidate mechanism for causing SGN diversity-heterogeneity of Ca(2+) influx among the AZs of IHCs-during postnatal development of the mouse cochlea. Ca(2+) imaging revealed a change from regenerative to graded synaptic Ca(2+) signaling after the onset of hearing, when in vivo SGN spike timing changed from patterned to Poissonian. Furthermore, we detected the concurrent emergence of stronger synaptic Ca(2+) signals in IHCs and higher spontaneous spike rates in SGNs. The strengthening of Ca(2+) signaling at a subset of AZs primarily reflected a gain of Ca(2+) channels. We hypothesize that the number of Ca(2+) channels at each IHC AZ critically determines the firing properties of its corresponding SGN and propose that AZ heterogeneity enables IHCs to decompose auditory information into functionally diverse SGNs.


Subject(s)
Calcium Signaling/physiology , Calcium/metabolism , Cochlear Nerve/physiology , Hair Cells, Auditory, Inner/physiology , Hearing/physiology , Animals , Calcium Channels/physiology , Cochlea/growth & development , Cochlea/innervation , Cochlear Nerve/growth & development , Cochlear Nucleus/cytology , Cochlear Nucleus/physiology , Computer Simulation , Electrophysiological Phenomena , Female , Immunohistochemistry , Male , Mice , Mice, Inbred C57BL , Microscopy, Confocal , Models, Neurological , Mutation/physiology , Nerve Tissue Proteins/genetics , Patch-Clamp Techniques , Receptors, Presynaptic/physiology , Spiral Ganglion/cytology , Spiral Ganglion/growth & development , Spiral Ganglion/physiology , Subcellular Fractions/physiology
12.
J Neurosci ; 33(48): 19034-44, 2013 Nov 27.
Article in English | MEDLINE | ID: mdl-24285907

ABSTRACT

Depression is a salient emotional feature of chronic pain. Depression alters the pain threshold and impairs functional recovery. To date, however, there has been limited understanding of synaptic or circuit mechanisms that regulate depression in the pain state. Here, we demonstrate that depression-like behaviors are induced in a rat model of chronic neuropathic pain. Using this model, we show that chronic pain selectively increases the level of GluA1 subunits of AMPA-type glutamate receptors at the synapses of the nucleus accumbens (NAc), a key component of the brain reward system. We find, in addition, that this increase in GluA1 levels leads to the formation of calcium-permeable AMPA receptors (CPARs). Surprisingly, pharmacologic blockade of these CPARs in the NAc increases depression-like behaviors associated with pain. Consistent with these findings, an AMPA receptor potentiator delivered into the NAc decreases pain-induced depression. These results show that transmission through CPARs in the NAc represents a novel molecular mechanism modulating the depressive symptoms of pain, and thus CPARs may be a promising therapeutic target for the treatment of pain-induced depression. More generally, these findings highlight the role of central glutamate signaling in pain states and define the brain reward system as an important region for the regulation of depressive symptoms of pain.


Subject(s)
Behavior, Animal/physiology , Calcium/metabolism , Depression/physiopathology , Depression/psychology , Neuralgia/physiopathology , Neuralgia/psychology , Nucleus Accumbens/physiology , Receptors, AMPA/physiology , Animals , Blotting, Western , Chronic Disease , Cold Temperature , Electrophysiological Phenomena/physiology , Male , Microinjections , Motor Activity/physiology , Pain Measurement/drug effects , Physical Stimulation , Rats , Rats, Sprague-Dawley , Receptors, AMPA/biosynthesis , Receptors, AMPA/genetics , Subcellular Fractions/physiology , Sucrose , Swimming/psychology
13.
J Neurosci ; 32(4): 1383-94, 2012 Jan 25.
Article in English | MEDLINE | ID: mdl-22279223

ABSTRACT

The astrocyte brain fatty acid binding protein (Fabp7) has previously been shown to have a coordinated diurnal regulation of mRNA and protein throughout mouse brain, and an age-dependent decline in protein expression within synaptoneurosomal fractions. Mechanisms that control time-of-day changes in expression and trafficking Fabp7 to the perisynaptic process are not known. In this study, we confirmed an enrichment of Fabp7 mRNA and protein in the astrocytic perisynaptic compartment, and observed a diurnal change in the intracellular distribution of Fabp7 mRNA in molecular layers of hippocampus. Northern blotting revealed a coordinated time-of-day-dependent oscillation for the Fabp7 mRNA poly(A) tail throughout murine brain. Cytoplasmic polyadenylation element-binding protein 1 (CPEB1) regulates subcellular trafficking and translation of synaptic plasticity-related mRNAs. Here we show that Fabp7 mRNA coimmunoprecipitated with CPEB1 from primary mouse astrocyte extracts, and its 3'UTR contains phylogenetically conserved cytoplasmic polyadenylation elements (CPEs) capable of regulating translation of reporter mRNAs during Xenopus oocyte maturation. Given that Fabp7 expression is confined to astrocytes and neural progenitors in adult mouse brain, the synchronized cycling pattern of Fabp7 mRNA is a novel discovery among known CPE-regulated transcripts. These results implicate circadian, sleep, and/or metabolic control of CPEB-mediated subcellular trafficking and localized translation of Fabp7 mRNA in the tripartite synapse of mammalian brain.


Subject(s)
Astrocytes/metabolism , Circadian Rhythm/physiology , Fatty Acid-Binding Proteins/metabolism , Nerve Tissue Proteins/metabolism , RNA, Messenger/metabolism , Synapses/metabolism , Animals , Base Sequence , Cells, Cultured , Fatty Acid-Binding Protein 7 , Female , Hippocampus/metabolism , Hippocampus/physiology , Male , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Polyadenylation/physiology , Protein Transport/physiology , Subcellular Fractions/metabolism , Subcellular Fractions/physiology , Synapses/physiology , Xenopus
14.
J Neurosci ; 32(47): 16637-50, 2012 Nov 21.
Article in English | MEDLINE | ID: mdl-23175819

ABSTRACT

Down syndrome cell adhesion molecule, or DSCAM, has been implicated in many neurodevelopmental processes including axon guidance, dendrite arborization, and synapse formation. Here we show that DSCAM plays an important role in regulating the morphogenesis of cortical pyramidal neurons in the mouse. We report that DSCAM expression is developmentally regulated and localizes to synaptic plasma membranes during a time of robust cortical dendrite arborization and spine formation. Analysis of mice that carry a spontaneous mutation in DSCAM (DSCAM(del17)) revealed gross morphological changes in brain size and shape in addition to subtle changes in cortical organization, volume, and lamination. Early postnatal mutant mice displayed a transient decrease in cortical thickness, but these reductions could not be attributed to changes in neuron production or cell death. DSCAM(del17) mutants showed temporary impairments in the branching of layer V pyramidal neuron dendrites at P10 and P17 that recovered to normal by adulthood. Defects in DSCAM(del17) dendrite branching correlated with a temporal increase in apical branch spine density and lasting changes in spine morphology. At P15 and P42, mutant mice displayed a decrease in the percentage of large, stable spines and an increase in the percentage of small, immature spines. Together, our findings suggest that DSCAM contributes to pyramidal neuron morphogenesis by regulating dendrite arborization and spine formation during cortical circuit development.


Subject(s)
Cell Adhesion Molecules/physiology , Cerebral Cortex/cytology , Dendrites/physiology , Dendritic Spines/physiology , Animals , Antimetabolites , Blotting, Western , Bromodeoxyuridine , Cell Adhesion Molecules/genetics , Cells, Cultured , Cerebral Cortex/growth & development , Female , Flow Cytometry , Fluorescent Antibody Technique , Gene Expression Regulation, Developmental , In Situ Hybridization , In Situ Nick-End Labeling , Male , Mice , Mutation/physiology , Pregnancy , Pyramidal Cells/physiology , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , Real-Time Polymerase Chain Reaction , Subcellular Fractions/physiology
15.
J Neurosci ; 32(44): 15296-308, 2012 Oct 31.
Article in English | MEDLINE | ID: mdl-23115168

ABSTRACT

Cerebellar motor coordination and cerebellar Purkinje cell synaptic function require metabotropic glutamate receptor 1 (mGluR1, Grm1). We used an unbiased proteomic approach to identify protein partners for mGluR1 in cerebellum and discovered glutamate receptor δ2 (GluRδ2, Grid2, GluΔ2) and protein kinase Cγ (PKCγ) as major interactors. We also found canonical transient receptor potential 3 (TRPC3), which is also needed for mGluR1-dependent slow EPSCs and motor coordination and associates with mGluR1, GluRδ2, and PKCγ. Mutation of GluRδ2 changes subcellular fractionation of mGluR1 and TRPC3 to increase their surface expression. Fitting with this, mGluR1-evoked inward currents are increased in GluRδ2 mutant mice. Moreover, loss of GluRδ2 disrupts the time course of mGluR1-dependent synaptic transmission at parallel fiber-Purkinje cells synapses. Thus, GluRδ2 is part of the mGluR1 signaling complex needed for cerebellar synaptic function and motor coordination, explaining the shared cerebellar motor phenotype that manifests in mutants of the mGluR1 and GluRδ2 signaling pathways.


Subject(s)
Neurons/physiology , Protein Kinase C/physiology , Purkinje Cells/physiology , Receptors, Glutamate/physiology , Receptors, Metabotropic Glutamate/physiology , Synaptic Transmission/physiology , TRPC Cation Channels/physiology , Animals , Excitatory Postsynaptic Potentials/genetics , Excitatory Postsynaptic Potentials/physiology , Female , Immunohistochemistry , Male , Mice , Mice, Knockout , Mutation/physiology , Patch-Clamp Techniques , Phenotype , Receptors, Cell Surface/physiology , Receptors, Glutamate/genetics , Signal Transduction/genetics , Signal Transduction/physiology , Solubility , Subcellular Fractions/metabolism , Subcellular Fractions/physiology
16.
Am J Physiol Heart Circ Physiol ; 302(8): H1603-13, 2012 Apr 15.
Article in English | MEDLINE | ID: mdl-22328080

ABSTRACT

Doxorubicin is a highly effective chemotherapeutic agent used for treating a wide spectrum of tumors, but its usage is limited because of its dose-dependent cardiotoxicity, especially in pediatric patients. Accumulating evidence indicates that caspase-dependent apoptosis contributes to the cardiotoxicity of doxorubicin. However, less attention has been paid to the effects of age on doxorubicin-induced apoptosis signaling in myocardium. This study focused on investigating differential apoptotic sensitivity between neonatal and adult myocardium, in particular, between neonatal and adult cardiomyocytes in vivo. Our results show that caspase-3 activity in normal mouse hearts decreased by ≥ 20-fold within the first 3 wk after birth, associated with a rapid downregulation in the expression of key proapoptotic proteins in intrinsic and extrinsic pathways. This rapid downregulation of caspase-3 activity was confirmed by immunostaining for cleaved caspase-3 and terminal deoxynucleotidyl transferase dUTP-mediated nick-end label staining. Doxorubicin treatment induced a dose-dependent increase in caspase-3 activity and apoptosis in neonatal mouse hearts, and both caspase-8 and caspase-9 activations were involved. Using transgenic mice with a nuclear localized LacZ reporter gene to label cardiomyocytes in vivo, we observed a fourfold higher level of doxorubicin-induced cardiomyocyte apoptosis in 1-wk-old mice compared with that in 3-wk-old mice. This study points to a major difference in apoptotic signaling in doxorubicin cardiotoxicity between neonatal and adult mouse hearts and reveals a critical transition from high to low susceptibility to doxorubicin-induced apoptosis during postnatal heart maturation.


Subject(s)
Antibiotics, Antineoplastic/pharmacology , Apoptosis/drug effects , Doxorubicin/pharmacology , Heart/growth & development , Myocardium/cytology , Animals , Animals, Newborn/physiology , Apoptosis Regulatory Proteins/biosynthesis , Apoptosis Regulatory Proteins/genetics , Caspases/physiology , Down-Regulation , Enzyme Activation/physiology , Immunohistochemistry , In Situ Nick-End Labeling , Lac Operon/genetics , Mice , Mice, Transgenic , Mitochondria, Heart/physiology , Myocytes, Cardiac/physiology , Signal Transduction/physiology , Subcellular Fractions/physiology
17.
J Neuroinflammation ; 9: 150, 2012 Jun 29.
Article in English | MEDLINE | ID: mdl-22747709

ABSTRACT

BACKGROUND: Defects in the low density lipoprotein receptor-related protein-1 (LRP-1) and p-glycoprotein (Pgp) clearance of amyloid beta (Aß) from brain are thought to contribute to Alzheimer's disease (AD). We have recently shown that induction of systemic inflammation by lipopolysaccharide (LPS) results in impaired efflux of Aß from the brain. The same treatment also impairs Pgp function. Here, our aim is to determine which physiological routes of Aß clearance are affected following systemic inflammation, including those relying on LRP-1 and Pgp function at the blood-brain barrier. METHODS: CD-1 mice aged between 6 and 8 weeks were treated with 3 intraperitoneal injections of 3 mg/kg LPS at 0, 6, and 24 hours and studied at 28 hours. 125I-Aß1-42 or 125I-alpha-2-macroglobulin injected into the lateral ventricle of the brain (intracerebroventricular (ICV)) or into the jugular vein (intravenous (IV)) was used to quantify LRP-1-dependent partitioning between the brain vasculature and parenchyma and peripheral clearance, respectively. Disappearance of ICV-injected 14 C-inulin from brain was measured to quantify bulk flow of cerebrospinal fluid (CSF). Brain microvascular protein expression of LRP-1 and Pgp was measured by immunoblotting. Endothelial cell localization of LRP-1 was measured by immunofluorescence microscopy. Oxidative modifications to LRP-1 at the brain microvasculature were measured by immunoprecipitation of LRP-1 followed by immunoblotting for 4-hydroxynonenal and 3-nitrotyrosine. RESULTS: We found that LPS: caused an LRP-1-dependent redistribution of ICV-injected Aß from brain parenchyma to brain vasculature and decreased entry into blood; impaired peripheral clearance of IV-injected Aß; inhibited reabsorption of CSF; did not significantly alter brain microvascular protein levels of LRP-1 or Pgp, or oxidative modifications to LRP-1; and downregulated LRP-1 protein levels and caused LRP-1 mislocalization in cultured brain endothelial cells. CONCLUSIONS: These results suggest that LRP-1 undergoes complex functional regulation following systemic inflammation which may depend on cell type, subcellular location, and post-translational modifications. Our findings that systemic inflammation causes deficits in both Aß transport and bulk flow like those observed in AD indicate that inflammation could induce and promote the disease.


Subject(s)
Amyloid beta-Peptides/antagonists & inhibitors , Amyloid beta-Peptides/metabolism , Blood-Brain Barrier/metabolism , Brain/metabolism , Endothelium, Vascular/metabolism , Lipopolysaccharides/toxicity , Peptide Fragments/antagonists & inhibitors , Peptide Fragments/metabolism , Alzheimer Disease/metabolism , Alzheimer Disease/pathology , Alzheimer Disease/physiopathology , Amyloid beta-Peptides/cerebrospinal fluid , Animals , Blood-Brain Barrier/cytology , Brain/blood supply , Brain/cytology , Cell Movement/physiology , Cells, Cultured , Endothelium, Vascular/cytology , Endothelium, Vascular/drug effects , Humans , Inflammation Mediators/cerebrospinal fluid , Inflammation Mediators/toxicity , Mice , Peptide Fragments/cerebrospinal fluid , Rats , Subcellular Fractions/metabolism , Subcellular Fractions/physiology
18.
J Pharmacol Exp Ther ; 340(1): 143-51, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22001259

ABSTRACT

Receptor-operated Ca²âº entry (ROCE) via transient receptor potential canonical channel 6 (TRPC6) is important machinery for an increase in intracellular Ca²âº concentration triggered by the activation of G(q) protein-coupled receptors. TRPC6 is phosphorylated by various protein kinases including protein kinase A (PKA). However, the regulation of TRPC6 activity by PKA is still controversial. The purpose of this study was to elucidate the role of adenylate cyclase/cAMP/PKA signaling pathway in the regulation of G(q) protein-coupled endothelin type A receptor (ET(A)R)-mediated ROCE via TRPC6. For this purpose, human embryonic kidney 293 (HEK293) cells stably coexpressing human ET(A)R and TRPC6 (wild type) or its mutants possessing a single point mutation of putative phosphorylation sites for PKA were used to analyze ROCE and amino acids responsible for PKA-mediated phosphorylation of TRPC6. Ca²âº measurements with thapsigargin-induced Ca²âº-depletion/Ca²âº-restoration protocol to estimate ROCE showed that the stimulation of ET(A)R induced marked ROCE in HEK293 cells expressing TRPC6 compared with control cells. The ROCE was inhibited by forskolin and papaverine to activate the cAMP/PKA pathway, whereas it was potentiated by Rp-8-bromoadenosine-cAMP sodium salt, a PKA inhibitor. The inhibitory effects of forskolin and papaverine were partially cancelled by replacing Ser28 (TRPC6(S28A)) but not Thr69 (TRPC6(T69A)) of TRPC6 with alanine. In vitro kinase assay with Phos-tag biotin to determine the phosphorylation level of TRPC6 revealed that wild-type and mutant (TRPC6(S28A) and TRPC6(T69A)) TRPC6 proteins were phosphorylated by PKA, but the phosphorylation level of these mutants was lower (approximately 50%) than that of wild type. These results suggest that TRPC6 is negatively regulated by the PKA-mediated phosphorylation of Ser28 but not Thr69.


Subject(s)
Adenylyl Cyclases/physiology , Calcium Signaling/physiology , Calcium/metabolism , Cyclic AMP-Dependent Protein Kinases/physiology , Cyclic AMP/physiology , Receptor, Endothelin A/physiology , Signal Transduction/physiology , TRPC Cation Channels/physiology , Adenylyl Cyclase Inhibitors , Blotting, Western , Colforsin/pharmacology , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/metabolism , Enzyme Activation/physiology , Enzyme Inhibitors/pharmacology , HEK293 Cells , Humans , Microscopy, Confocal , Mutation/genetics , Mutation/physiology , Papaverine/pharmacology , Phosphorylation , Protein Kinase Inhibitors/pharmacology , Retroviridae/genetics , Signal Transduction/drug effects , Subcellular Fractions/physiology , TRPC Cation Channels/genetics , TRPC6 Cation Channel , Thapsigargin/pharmacology
19.
Acta Anaesthesiol Scand ; 56(6): 724-9, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22571497

ABSTRACT

BACKGROUND: Blood transfusion is reported to suppress the recipient's immune system. To avoid allogenic transfusion, post-operative shed blood retransfusion is a commonly used method. The aim of this study was to investigate the dose-related impact of post-operatively collected shed blood products on the stimulated cytokine release in an in vitro model of transfusion. METHODS: Venous blood samples obtained from 20 patients undergoing hip arthroplasty were mixed with post-operatively collected unprocessed, processed, and irradiated shed blood as well as normal saline as a control. Shed blood was processed by centrifugation and separating the cellular fraction from the soluble fraction and washing the cellular fraction with phosphate buffered saline to eliminate any cell fragments and other substances. Mixing ratios were 1:3, 1:1, and 3:1. Endotoxin-stimulated release of Tumor Necrosis Factor-alpha (TNF-α) was measured after 24 h of culture by enzyme-linked immunosorbent assay. RESULTS: Unprocessed, irradiated shed blood and the soluble fraction caused a significant suppression of stimulated TNF-α release compared to control. The addition of the cellular shed blood fraction had no significant influence on the TNF-α release compared to control. CONCLUSION: Shed blood and its components caused a dose-independent immunomodulation as indicated by a suppressed stimulated TNF-α release. Leukocytes seem to play a minor role, as we observed a sustained suppression after transfusion of γ-irradiated shed blood. Only the elimination of soluble factors by centrifugation and followed by an additional washing step prevented the observed suppression of TNF-α. Thus, we assume that washing of shed blood can prevent potential detrimental effects.


Subject(s)
Cytokines/metabolism , Operative Blood Salvage , Transfusion Reaction , Arthroplasty, Replacement, Hip , Blood/radiation effects , Centrifugation , Cytokines/analysis , Enzyme-Linked Immunosorbent Assay , Gamma Rays , Humans , Lipopolysaccharides/pharmacology , Monocytes/metabolism , Stimulation, Chemical , Subcellular Fractions/physiology , Tumor Necrosis Factor-alpha/analysis
20.
Sci Rep ; 12(1): 3003, 2022 02 22.
Article in English | MEDLINE | ID: mdl-35194033

ABSTRACT

Bacterial kidney disease (BKD) is a chronic bacterial disease affecting both wild and farmed salmonids. The causative agent for BKD is the Gram-positive fish pathogen Renibacterium salmoninarum. As treatment and prevention of BKD have proven to be difficult, it is important to know and identify the key bacterial proteins that interact with the host. We used subcellular fractionation to report semi-quantitative data for the cytosolic, membrane, extracellular, and membrane vesicle (MV) proteome of R. salmoninarum. These data can aid as a backbone for more targeted experiments regarding the development of new drugs for the treatment of BKD. Further analysis was focused on the MV proteome, where both major immunosuppressive proteins P57/Msa and P22 and proteins involved in bacterial adhesion were found in high abundance. Interestingly, the P22 protein was relatively enriched only in the extracellular and MV fraction, implicating that MVs may play a role in host-pathogen interaction. Compared to the other subcellular fractions, the MVs were also relatively enriched in lipoproteins and all four cell wall hydrolases belonging to the New Lipoprotein C/Protein of 60 kDa (NlpC/P60) family were detected, suggesting an involvement in the formation of the MVs.


Subject(s)
Cytoplasmic Vesicles/physiology , Proteome/genetics , Proteomics , Virulence , Animals , Bacterial Adhesion/genetics , Bacterial Proteins/metabolism , Bacterial Proteins/physiology , Cytoplasmic Vesicles/metabolism , Fish Diseases/microbiology , Fishes/microbiology , Host-Parasite Interactions , Kidney Diseases/microbiology , Kidney Diseases/veterinary , Lipoproteins/metabolism , Renibacterium/cytology , Renibacterium/genetics , Renibacterium/pathogenicity , Subcellular Fractions/physiology , Virulence/genetics
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