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1.
Proc Natl Acad Sci U S A ; 119(50): e2217542119, 2022 12 13.
Artículo en Inglés | MEDLINE | ID: mdl-36490315

RESUMEN

R-loops, or RNA:DNA hybrids, can induce DNA damage, which requires DNA repair factors including breast cancer type 1 susceptibility protein (BRCA1) to restore genomic integrity. To date, several pathogenic mutations have been found within the tandem BRCA1 carboxyl-terminal (BRCT) domains that mediate BRCA1 interactions with proteins and DNA in response to DNA damage. Here, we describe a nonrepair role of BRCA1 BRCT in suppressing ribosomal R-loops via two mechanisms. Through its RNA binding and annealing activities, BRCA1 BRCT facilitates the formation of double-stranded RNA between ribosomal RNA (rRNA) and antisense-rRNA (as-rRNA), hereby minimizing rRNA hybridization to ribosomal DNA to form R-loops. BRCA1 BRCT also promotes RNA polymerase I-dependent transcription of as-rRNA to enhance double-stranded rRNA (ds-rRNA) formation. In addition, BRCA1 BRCT-mediated as-rRNA production restricts rRNA maturation in unperturbed cells. Hence, impairing as-rRNA transcription and ds-rRNA formation due to BRCA1 BRCT deficiency deregulates rRNA processing and increases ribosomal R-loops and DNA breaks. Our results link ribosomal biogenesis dysfunction to BRCA1-associated genomic instability.


Asunto(s)
Proteína BRCA1 , ARN Bicatenario , Proteína BRCA1/metabolismo , ARN sin Sentido , Reparación del ADN , Daño del ADN , ADN
2.
Nano Lett ; 24(14): 4256-4264, 2024 Apr 10.
Artículo en Inglés | MEDLINE | ID: mdl-38557048

RESUMEN

Biological materials exhibit fascinating mechanical properties for intricate interactions at multiple interfaces to combine superb toughness with wondrous strength and stiffness. Recently, strong interlayer entanglement has emerged to replicate the powerful dissipation of natural proteins and alleviate the conflict between strength and toughness. However, designing intricate interactions in a strong entanglement network needs to be further explored. Here, we modulate interlayer entanglement by introducing multiple interactions, including hydrogen and ionic bonding, and achieve ultrahigh mechanical performance of graphene-based nacre fibers. Two essential modulating trends are directed. One is modulating dynamic hydrogen bonding to improve the strength and toughness up to 1.58 GPa and 52 MJ/m3, simultaneously. The other is tailoring ionic coordinating bonding to raise the strength and stiffness, reaching 2.3 and 253 GPa. Modulating various interactions within robust entanglement provides an effective approach to extend performance limits of bioinspired nacre and optimize multiscale interfaces in diverse composites.

3.
Langmuir ; 40(19): 9999-10007, 2024 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-38696767

RESUMEN

With a large theoretical capacity and high energy density, aluminum-air batteries are a promising energy storage device. However, the rigid structure and liquid electrolyte of a traditional aluminum-air battery limit its application potential in the field of flexible electronics, and the irreversible corrosion of its anode greatly reduces the battery life. To solve the above problems, a PVA/KC/KOH (2 M) composite gel polymer electrolyte (GPE) with a three-dimensional dual-network structure consisting of polyvinyl alcohol (PVA), kappa-carrageenan (KC), and potassium hydroxide was prepared in this paper by a simple two-step method and applied in aluminum-air batteries. At room temperature, the ionic conductivity of the PVA/KC/KOH (2 M) composite GPE was found to be up to 6.50 × 10-3 S cm-1. By utilizing this composite GPE, a single flexible aluminum-air battery was assembled and achieved a maximum discharge voltage of 1.2 V at 5 mA cm-2, with discharge time exceeding 3 h. Moreover, the single flexible aluminum-air battery maintains good electrochemical performance under various deformation modes, and the output voltage of the battery remains at about 99% after 300 cycles. The construction of flexible aluminum-air batteries based on a three-dimensional dual-network PVA/KC/KOH composite GPE provides excellent safety and high-multiplication capabilities for aluminum-air batteries, making them potential candidates for various flexible device applications.

4.
Exp Cell Res ; 427(2): 113600, 2023 06 15.
Artículo en Inglés | MEDLINE | ID: mdl-37062521

RESUMEN

Berberine (BBR) is an effective drug against liver fibrosis (LF). Autophagy is involved in the pathogenesis of LF; however, the mechanism linking BBR to autophagy in LF remains unresolved. To explore the underlying mechanism, we assessed the effects of BBR on autophagy and apoptosis of activated hepatic stellate cells (HSCs) in vitro and in a murine model of fibrosis. The decreased expression of the autophagy activation marker ATG5, autophagosome formation, and autophagy flux in the HSC model confirmed that BBR inhibited autophagy in activated HSCs and in mice with liver fibrosis. Moreover, ATG5 was necessary for inducing autophagy and HSC activation. BBR suppressed ATG5 expression by upregulating miR-30a-5p expression, which affected the stability of ATG5 mRNA by binding to its 3'-untranslated region, an effect that was attenuated by treatment with a miR-30a-5p inhibitor. BBR also markedly induced HSC apoptosis, as indicated by the upregulated expression of the pro-apoptosis markers p53, BAX, and cleaved PARP and the downregulated expression of the anti-apoptosis marker BCL-2, effects that were reversed by ATG5 overexpression. In vivo, BBR improved mouse LF by decreasing collagen deposition, inflammatory cell infiltration, and expression of fibrosis markers hydroxyproline, α-smooth muscle actin, and collagen type 1-A1 and the autophagy marker LC3. BBR had a protective effect on mouse fibrotic livers and reduced serum aspartate aminotransferase and alanine aminotransferase levels. Collectively, these results reveal a novel mechanism of BBR-induced autophagy inhibition triggering apoptosis in HSCs, providing a reliable experimental and theoretical basis for developing BBR-based candidate drugs for LF.


Asunto(s)
Berberina , MicroARNs , Ratones , Animales , Berberina/farmacología , Berberina/uso terapéutico , Cirrosis Hepática/tratamiento farmacológico , Cirrosis Hepática/genética , Cirrosis Hepática/metabolismo , Células Estrelladas Hepáticas/metabolismo , Colágeno/metabolismo , Autofagia/genética , MicroARNs/metabolismo , Proteína 5 Relacionada con la Autofagia/genética , Proteína 5 Relacionada con la Autofagia/metabolismo
5.
J Chem Phys ; 161(1)2024 Jul 07.
Artículo en Inglés | MEDLINE | ID: mdl-38953451

RESUMEN

Inspired by biological channels, achieving precise separation of ion/water and ion/ion requires finely tuned pore sizes at molecular dimensions and deliberate exposure of charged groups. Covalent organic frameworks (COFs), a class of porous crystalline materials, offer well-defined nanoscale pores and diverse structures, making them excellent candidates for nanofluidic channels that facilitate ion and water transport. In this study, we perform molecular simulations to investigate the structure and kinetics of water and ions confined within the typical COFs with varied exposure of charged groups. The COFs exhibit vertically arrayed nanochannels, enabling diffusion coefficients of water molecules within COFs to remain within the same order of magnitude as in the bulk. The motion of water molecules manifests in two distinct modes, creating a mobile hydration layer around acid groups. The ion diffusion within COFs displays a notable disparity between monovalent (M+) and divalent (M2+) cations. As a result, the selectivity of M+/M2+ can exceed 100, while differentiation among M+ is less pronounced. In addition, our simulations indicate a high rejection (R > 98%) in COFs, indicating their potential as ideal materials for desalination. The chemical flexibility of COFs indicates that would hold significant promise as candidates for advanced artificial ion channels and separation membranes.

6.
Artículo en Inglés | MEDLINE | ID: mdl-38758154

RESUMEN

Objective: This study aims to investigate the influencing factors of transient hypoparathyroidism following thyroidectomy and assess the effects of rehabilitation treatment, focusing on enhancing management and outcomes for patients. Methods: In this retrospective study, 90 patients who underwent thyroidectomy in our hospital from February 2021 to February 2023 were collected. According to the postoperative level of parathyroid hormone (PTH), the patients were divided into normal group [(no hypoparathyroidism, ≥ 0.27 pmol/l), n=65] and hypoparathyroidism (transient hypoparathyroidism, < 0.27 pmol/l, n=25). We retrospectively analyzed 90 thyroidectomy patients, categorizing them into normal and hypoparathyroidism groups based on postoperative parathyroid hormone levels. Logistic regression and ROC curve analysis were employed to evaluate the factors influencing transient hypoparathyroidism and predict recovery.Clinical data of the two groups of patients were collected, and the relationship between postoperative 1dPTH (Parathyroid hormone levels on the first postoperative day) level and recovery effect was analyzed. Logistic regression was used to analyze the influencing factors of temporary hypoparathyroidism after thyroidectomy, and a ROC curve was used to predict the efficacy of the 1dPTH level on postoperative PTH recovery time. Results: There were no differences in gender, hypertension, diabetes and hyperlipidemia between the two groups (P > .05). The age and tumor diameter of the normal group were lower than those of the hypoactive group, and the proportion of patients with thyroiditis and malignant tumors, as well as patients undergoing total thyroidectomy and removal of tracheoesophageal lymph nodes in the normal group were significantly lower than those in the hypoactive group. The above differences were statistically significant (P < .05). Logistic regression analysis showed that older age, malignant tumor, larger tumor diameter, total thyroidectomy, and tracheoesophageal lymph node dissection were independent risk factors for transient hypoparathyroidism after thyroidectomy (P < .05). The level of PTH on the 1st day after surgery in patients with recovery time ≤ 1 month was higher than that in patients with recovery time > 1 month, and the difference was statistically significant (P < .05). ROC curve showed that the PTH level on the 1st day after surgery had a certain predictive value on PTH recovery time, and the AUC value (area under the curve) was 0.873 (P < .05). These findings suggest that patients with older age, malignancy, larger tumor diameter, total thyroidectomy, and removal of tracheoesophageal lymph nodes are more likely to develop transient hypoparathyroidism after thyroidectomy. This understanding is crucial for the management of postoperative patients, and physicians may need to pay special attention to these high-risk patients and implement appropriate interventions to reduce the occurrence of hypoparathyroidism. Significant factors contributing to transient hypoparathyroidism included older age, malignant tumors, larger tumor diameter, total thyroidectomy, and tracheoesophageal lymph node dissection. These findings, backed by statistical significance, underline the clinical relevance of these risk factors in postoperative management. Conclusion: The study identifies key risk factors for transient hypoparathyroidism post-thyroidectomy, emphasizing the need for tailored postoperative care. The predictive value of immediate postoperative PTH levels could guide clinical management to mitigate hypoparathyroidism risks.

7.
Nano Lett ; 23(16): 7350-7357, 2023 08 23.
Artículo en Inglés | MEDLINE | ID: mdl-37580044

RESUMEN

The mechanical properties of soft tissues can often be strongly correlated with the progression of various diseases, such as myocardial infarction (MI). However, the dynamic mechanical properties of cardiac tissues during MI progression remain poorly understood. Herein, we investigate the rheological responses of cardiac tissues at different stages of MI (i.e., early-stage, mid-stage, and late-stage) with atomic force microscopy-based microrheology. Surprisingly, we discover that all cardiac tissues exhibit a universal two-stage power-law rheological behavior at different time scales. The experimentally found power-law exponents can capture an inconspicuous initial rheological change, making them particularly suitable as markers for early-stage MI diagnosis. We further develop a self-similar hierarchical model to characterize the progressive mechanical changes from subcellular to tissue scales. The theoretically calculated mechanical indexes are found to markedly vary among different stages of MI. These new mechanical markers are applicable for tracking the subtle changes of cardiac tissues during MI progression.


Asunto(s)
Infarto del Miocardio , Humanos , Reología , Infarto del Miocardio/diagnóstico , Microscopía de Fuerza Atómica , Viscosidad
8.
Nano Lett ; 23(8): 3352-3361, 2023 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-37052245

RESUMEN

Natural materials teach that mechanical dissipative interactions relieve the conflict between strength and toughness and enable fabrication of strong yet tough artificial materials. Replicating natural nacre structure has yielded rich biomimetic materials; however, stronger interlayer dissipation still waits to be exploited to extend the performance limits of artificial nacre materials. Here, we introduce strong entanglement as a new artificial interlayer dissipative mechanism and fabricate entangled nacre materials with superior strength and toughness, across molecular to nanoscale nacre structures. The entangled graphene nacre fibers achieved high strength of 1.2 GPa and toughness of 47 MJ/m3, and films reached 1.5 GPa and 25 MJ/m3. Experiments and simulations reveal that strong entanglement can effectively dissipate interlayer energy to relieve the conflict between strength and toughness, acting as natural folded proteins. The strong interlayer entanglement opens up a new path for designing stronger and tougher artificial materials to mimic but surpass natural materials.

9.
Cell Mol Biol (Noisy-le-grand) ; 69(14): 272-276, 2023 Dec 20.
Artículo en Inglés | MEDLINE | ID: mdl-38279419

RESUMEN

Papillary thyroid carcinoma (PTC) is the most common endocrine malignant tumor and the metastasis of PTC often leads to unfavorable prognosis. Thus, the purpose of the current research was to mainly explore the role of miR-3653-3p in PTC progression. The expression level of miR-3653-3p in PTC was determined by quantitative Real Time-Polymerase Chain Reaction (qRT-PCR), and Cell Counting Kit-8 (CCK-8) assay and colony formation assay were recruited to assess the ability of miR-3653-3p on cell proliferation. Next, transwell assay and Matrigel assay were involved to examine the ability of miR-3653-3p on cell migration and invasion. At last, Dual-Luciferase reporter assay and Western blotting were recruited to validate the down-stream target of miR-3653-3p. Results showed that miR-3653-3p was down-expressed in PTC, and upregulated miR-3653-3p inhibited cell proliferation, cell migration, and cell invasion in vitro. In addition, CRIPTO-1 was a downstream target of miR-3653-3p, and miR-3653-3p inhibited PTC progression via regulating CRIPTO-1. In sum, this research verifies that miR-3653-3p suppresses cell proliferation, migration, and invasion in PTC via regulating CRIPTO-1. These findings provide new insight into the underlying mechanism of PTC progression and may be useful in finding biomarkers and therapeutic targets of PTC.


Asunto(s)
MicroARNs , Neoplasias de la Tiroides , Humanos , MicroARNs/genética , MicroARNs/metabolismo , Cáncer Papilar Tiroideo/genética , Cáncer Papilar Tiroideo/patología , Neoplasias de la Tiroides/genética , Neoplasias de la Tiroides/patología , Línea Celular Tumoral , Proliferación Celular/genética , Movimiento Celular/genética , Regulación Neoplásica de la Expresión Génica
10.
J Chem Phys ; 159(2)2023 Jul 14.
Artículo en Inglés | MEDLINE | ID: mdl-37428058

RESUMEN

Graphene oxide (GO) sheets are widely used as building blocks in flexible electronic devices, structural materials, and energy storage technology owing to physicochemical flexibility and remarkable mechanical properties. GO exists as lamellar structures in these applications and, thus, it urges to enhance interface interaction to prevent interfacial failure. This study explores the adhesion of GO with and without intercalated water utilizing steered molecular dynamics (SMD) simulations. We find the interfacial adhesion energy (γ) depends on the synergistic effect of the types of functional groups, the degree of oxidation (c), and water content (wt). The intercalated monolayer water confined within GO flakes can improve the γ by more than 50% whereas the interlayer spacing is enlarged. The enhancement of adhesion is from the cooperative hydrogen bonding bridges between confined water and functional group on GO. Furthermore, the optimal water content wt = 20% and oxidation degree c = 20% are obtained. Our findings provide an experimentally available way to improve interlayer adhesion through molecular intercalation, which opens the possibility of high-performance laminate nanomaterial-based films for versatile applications.

11.
Proc Natl Acad Sci U S A ; 117(38): 23588-23596, 2020 09 22.
Artículo en Inglés | MEDLINE | ID: mdl-32900933

RESUMEN

In human cells, the DNA replication factor proliferating cell nuclear antigen (PCNA) can be conjugated to either the small ubiquitinlike modifier SUMO1 or SUMO2, but only SUMO2-conjugated PCNA is induced by transcription to facilitate resolution of transcription-replication conflict (TRC). To date, the SUMO E3 ligase that provides substrate specificity for SUMO2-PCNA conjugation in response to TRC remains unknown. Using a proteomic approach, we identified TRIM28 as the E3 ligase that catalyzes SUMO2-PCNA conjugation. In vitro, TRIM28, together with the RNA polymerase II (RNAPII)-interacting protein RECQ5, promotes SUMO2-PCNA conjugation but inhibits SUMO1-PCNA formation. This activity requires a PCNA-interacting protein (PIP) motif located within the bromodomain of TRIM28. In cells, TRIM28 interaction with PCNA on human chromatin is dependent on both transcription and RECQ5, and SUMO2-PCNA level correlates with TRIM28 expression. As a consequence, TRIM28 depletion led to RNAPII accumulation at TRC sites, and expression of a TRIM28 PIP mutant failed to suppress TRC-induced DNA breaks.


Asunto(s)
Replicación del ADN/genética , Antígeno Nuclear de Célula en Proliferación/metabolismo , Proteínas Modificadoras Pequeñas Relacionadas con Ubiquitina/metabolismo , Proteína 28 que Contiene Motivos Tripartito/metabolismo , Ubiquitina-Proteína Ligasas/metabolismo , Roturas del ADN , Células HEK293 , Humanos , Antígeno Nuclear de Célula en Proliferación/genética , RecQ Helicasas/genética , RecQ Helicasas/metabolismo , Proteínas Modificadoras Pequeñas Relacionadas con Ubiquitina/genética , Proteína 28 que Contiene Motivos Tripartito/genética , Ubiquitina-Proteína Ligasas/genética
12.
J Biol Chem ; 295(41): 14236-14247, 2020 10 09.
Artículo en Inglés | MEDLINE | ID: mdl-32796037

RESUMEN

DUF328 family proteins are present in many prokaryotes; however, their molecular activities are unknown. The Escherichia coli DUF328 protein YaaA is a member of the OxyR regulon and is protective against oxidative stress. Because uncharacterized proteins involved in prokaryotic oxidative stress response are rare, we sought to learn more about the DUF328 family. Using comparative genomics, we found a robust association between the DUF328 family and genes involved in DNA recombination and the oxidative stress response. In some proteins, DUF328 domains are fused to other domains involved in DNA binding, recombination, and repair. Cofitness analysis indicates that DUF328 family genes associate with recombination-mediated DNA repair pathways, particularly the RecFOR pathway. Purified recombinant YaaA binds to dsDNA, duplex DNA containing bubbles of unpaired nucleotides, and Holliday junction constructs in vitro with dissociation equilibrium constants of 200-300 nm YaaA binds DNA with positive cooperativity, forming multiple shifted species in electrophoretic mobility shift assays. The 1.65-Å resolution X-ray crystal structure of YaaA reveals that the protein possesses a new fold that we name the cantaloupe fold. YaaA has a positively charged cleft and a helix-hairpin-helix DNA-binding motif found in other DNA repair enzymes. Our results demonstrate that YaaA is a new type of DNA-binding protein associated with the oxidative stress response and that this molecular function is likely conserved in other DUF328 family members.


Asunto(s)
Proteínas de Unión al ADN/química , Proteínas de Escherichia coli/química , Escherichia coli/química , Pliegue de Proteína , Cristalografía por Rayos X , Reparación del ADN , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Bacteriano/metabolismo , Proteínas de Unión al ADN/genética , Proteínas de Unión al ADN/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Estrés Oxidativo , Dominios Proteicos
13.
Exp Dermatol ; 30(12): 1764-1774, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34218464

RESUMEN

Melanoma is considered as the most common malignancy among skin cancers. The roles of many long non-coding RNAs (lncRNAs) have been clearly identified in multiple tumors. Nevertheless, lncRNA MSC antisense RNA 1 (MSC-AS1) has not been deeply investigated melanoma. In the present study, RT-qPCR and western blot analyses were used to measure the expression of RNAs and proteins. Functional and in vivo assays were implemented to detect the function of genes in melanoma. RNA pull-down, RIP and luciferase reporter assays were applied for determining interactions between RNA and protein molecules. It was observed that MSC-AS1 and lymphoid enhancer-binding factor 1 (LEF1) were remarkably up-regulated while microRNA-302a-3p (miR-302a-3p) down-regulated in melanoma cell lines. The silencing of MSC-AS1 hindered cell proliferation, migration and epithelial-mesenchymal transition (EMT) in vitro and tumor growth in vivo. Furthermore, MSC-AS1 regulated LEF1 expression through sponging miR-302a-3p and recruiting insulin like growth factor 2 mRNA-binding protein 2 (IGF2BP2). Eventually, LEF1 overexpression rescued cell progression impaired by MSC-AS1 knock-down. In summary, our research identified the MSC-AS1/miR-302a-3p/IGF2BP2/LEF1 axis in melanoma development, which indicated that MSC-AS1 is a potential biomarker in the treatment of melanoma.


Asunto(s)
Regulación Neoplásica de la Expresión Génica , Melanoma/fisiopatología , ARN Largo no Codificante/metabolismo , Animales , Línea Celular Tumoral , Movimiento Celular , Proliferación Celular , Femenino , Humanos , Factor de Unión 1 al Potenciador Linfoide/metabolismo , Melanoma/genética , Ratones , Ratones Desnudos , MicroARNs/metabolismo , Proteínas de Unión al ARN/metabolismo
14.
Langmuir ; 37(43): 12577-12585, 2021 Nov 02.
Artículo en Inglés | MEDLINE | ID: mdl-34672598

RESUMEN

The ionic transport in nanoscale channels with the critical size comparable to ions and solvents shows excellent performance on electrochemical desalination, ion separation, and supercapacitors. However, the key quantity ionic conductivity (σ) in the nanochannel that evaluates how easily the electric current is driven by an external voltage is still unknown because of the challenges in experimental measurement. In this work, we present an atomistic simulation-based study, which shows that how the ion concentration, nanoconfinement, and heterogeneous solvation modify the ionic conductivity in a two-dimensional graphene nanochannel. We find that σ in the confined channel is lower than that in the bulk (σb) at the same concentration along with enhanced ion-ion correlation. However, surprisingly, the local σ near the channel wall is more conductive than σb and is about 2-3 folds of the inner layer due to the highly concentrated charge carriers. Based on the layered feature of σ along the width of the channel, we propose a model that contains two dead (or depletion) layers, two highly conductive layers, and one inner layer to describe the ionic dynamics in the nanochannels. Our findings may open the way to unique nanofluidic functionalities, such as energy harvesting/storage and controlling transport at single-molecule and ion levels using the liquid layer near the wall.

15.
Langmuir ; 36(43): 12954-12962, 2020 Nov 03.
Artículo en Inglés | MEDLINE | ID: mdl-33100011

RESUMEN

Aluminum-air batteries possess high theoretical specific capacities and energy densities. However, the desired application performance in the field of flexible electronics is limited by the rigid battery structure and slow kinetics of the oxygen reduction reaction (ORR). To address these issues, flexible, stretchable, and customizable aluminum-air batteries with a reference to honeycomb shape are composed of multilayer single battery units to achieve large scalability and start-stop control. The single aluminum-air battery combines MnO2 with N/S codoped graphene to improve the electrocatalytic activity. Benefiting from an efficient electrocatalyst and reasonable structural design, the single aluminum-air battery exhibits excellent electrochemical characteristics under deformation conditions with a high specific capacity and energy density (1203.2 mAh g-1 Al and 1630.1 mWh g-1 Al). Furthermore, the obtained honeycomb-shaped stretchable aluminum-air batteries maintain a stable output voltage over the 2500% stretching. More interestingly, the stretchable honeycomb structure not only can solve the start-stop control problem but also has the potential to reduce the self-corrosion in disposable metal-air batteries. In addition, owing to the customizable shapes and sizes, the honeycomb-shaped stretchable aluminum-air batteries facilitate the integrated application of flexible batteries in wearables.

16.
Appl Opt ; 59(1): 1-8, 2020 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-32225270

RESUMEN

A bidirectional tuning mechanism of whispering gallery modes (WGMs) in a capillary-based microbubble microresonator infiltrated with magnetic fluids (MFs) is investigated. Owing to distinct RI responses of MFs dependent on the applied magnetic field direction with respect to the capillary axis, the RI of MFs shows different variation trends when an external magnetic field is parallel or perpendicular to the capillary axis. Experimental results indicate that WGM resonance dips exhibit wavelength shift in inverse directions for the above two cases, which is in accordance with our theoretical analysis on different refractive variation behaviors of MFs. As the applied magnetic field is perpendicular or parallel to the capillary axis, the WGM resonance wavelength tuning sensitivities tend to be $ - {15.01}\;{\rm pm/mT}$-15.01pm/mT and 6.3 pm/mT, respectively. Our proposed WGM tuning scheme has several desirable advantages, including bidirectional tunability, high Q-factor, ease of fabrication, and good compatibility with functional materials, making it a promising candidate in the field of magnetic field vector sensing and magnetically manipulated micro-optic devices.

17.
Nucleic Acids Res ; 46(18): 9496-9509, 2018 10 12.
Artículo en Inglés | MEDLINE | ID: mdl-30107528

RESUMEN

RECQ5 (RECQL5) is one of several human helicases that dissociates RAD51-DNA filaments. The gene that encodes RECQ5 is frequently amplified in human tumors, but it is not known whether amplification correlates with increased gene expression, or how increased RECQ5 levels affect DNA repair at nicks and double-strand breaks. Here, we address these questions. We show that RECQ5 gene amplification correlates with increased gene expression in human tumors, by in silico analysis of over 9000 individual tumors representing 32 tumor types in the TCGA dataset. We demonstrate that, at double-strand breaks, increased RECQ5 levels inhibited canonical homology-directed repair (HDR) by double-stranded DNA donors, phenocopying the effect of BRCA deficiency. Conversely, at nicks, increased RECQ5 levels stimulated 'alternative' HDR by single-stranded DNA donors, which is normally suppressed by RAD51; this was accompanied by stimulation of mutagenic end-joining. Even modest changes (2-fold) in RECQ5 levels caused significant dysregulation of repair, especially HDR. These results suggest that in some tumors, RECQ5 gene amplification may have profound consequences for genomic instability.


Asunto(s)
Inestabilidad Genómica/genética , Neoplasias/genética , Recombinasa Rad51/genética , RecQ Helicasas/genética , Simulación por Computador , Roturas del ADN de Doble Cadena , Reparación del ADN por Unión de Extremidades/genética , Reparación del ADN/genética , Amplificación de Genes/genética , Regulación Neoplásica de la Expresión Génica , Humanos , Mutagénesis , Neoplasias/patología , Reparación del ADN por Recombinación/genética , Transducción de Señal/genética
18.
Langmuir ; 35(24): 7713-7719, 2019 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-31122020

RESUMEN

In this work, a closed thermoelectric cell based on a nanoporous graphene electrode is developed to convert low-grade thermal energy to electric energy. The thermoelectric cell consists of two nanoporous graphene electrodes in contact with the hot and cold ends, respectively, encapsulated in a KCl electrolyte, and the energy is harvested from the redistribution of the electric double layer (EDL) of the graphene electrodes under different temperatures. Because of the large specific surface and conductivity of nanoporous graphene electrodes, the electric voltage is 168.91 mV with the hot-end temperature of 61 °C and cold-end temperature of 26 °C, corresponding to the thermoelectric coefficient of 4.54 mV·°C-1, which is much larger than that of the conventional thermoelectric generator. The specific power output achieves 1.38 mW·g-1 and is also significantly larger than the previous EDL-based thermoelectric generator. System performance with the concentration of the KCl electrolyte is examined. The proposed thermoelectric cell can harvest low-grade waste heat from the ambient environment, which may have potential applications in energy supply, wireless powered devices, outdoor survival, and so forth.

19.
Phys Chem Chem Phys ; 21(28): 15845-15853, 2019 Jul 17.
Artículo en Inglés | MEDLINE | ID: mdl-31282519

RESUMEN

The recently fabricated monolayer MoS2-WSe2 lateral heterostructures are promising for many interesting applications, such as p-n diodes, photodetectors, transistors, sensors, light-emitting diodes and thermoelectric and flexible nanodevices. In this work, we study the mechanical and thermal properties of MoS2-WSe2 lateral heterostructures by using molecular dynamics (MD) simulations based on the recently parameterized Stillinger-Weber (SW) potential. It is found that the fracture strength and fracture strain of MoS2-WSe2 lateral heterostructures are dictated by the mechanical properties of MoS2, and are very sensitive to temperature. However, when a crack is introduced in the MoS2-WSe2 heterostructures, failure may occur either in MoS2 or WSe2, depending on the crack length and location. Interestingly, the fracture strengths obtained from our MD simulations are in agreement with those obtained from the Griffith theory. Our MD simulations further reveal that, in addition to the low thermal conductivities of MoS2 and WSe2, the MoS2-WSe2 heterojunctions exhibit a very low interfacial thermal conductance, which is about one order of magnitude lower than that of graphene-hBN heterojunctions.

20.
Phys Chem Chem Phys ; 21(39): 22149-22157, 2019 Oct 09.
Artículo en Inglés | MEDLINE | ID: mdl-31573003

RESUMEN

In this work, experiments and molecular dynamics (MD) simulations are carried out to explore the synergistic effect of supercritical CO2 (scCO2) and organic solvent on intercalation and exfoliation of graphene. Experimental characterizations via transmission electron microscopy, atomic force microscopy and Raman spectroscopy indicate that by combining scCO2 and organic solvent (N-methylpyrrolidone, NMP), few-layer graphene is successfully exfoliated from graphite, among which over 30% is 1-4 layers, and 55% is 5-8 layers. Systematic experiments have shown that compared with pure scCO2 or NMP, the mixed scCO2 and NMP can significantly increase the amount of graphene and the rate of few-layer graphene, and the optimum volume fraction of NMP is 25%. Parallel MD simulations indicate that the scCO2 molecules first diffuse into the interlayer of graphite, and then the larger NMP molecules insert as wedges and further expand interlayer spacing, promoting intercalation and exfoliation. The iteration of scCO2 diffusion and the NMP wedge can generate positive feedback to improve the exfoliation productivity and efficiency. This work explores the synergistic effect of scCO2 and NMP on the exfoliation of graphene, which may provide useful insights for exfoliation of other two dimensional materials.

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