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1.

A One Health Perspective on Salmonella enterica Serovar Infantis, an Emerging Human Multidrug-Resistant Pathogen.

Mattock, Jennifer; Chattaway, Marie Anne; Hartman, Hassan; Dallman, Timothy J; Smith, Anthony M; Keddy, Karen; Petrovska, Liljana; Manners, Emma J; Duze, Sanelisiwe T; Smouse, Shannon; Tau, Nomsa; Timme, Ruth; Baker, Dave J; Mather, Alison E; Wain, John; Langridge, Gemma C.

Emerg Infect Dis ; 30(4): 701-710, 2024 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-38526070

2.

Genome-wide analysis of genes involved in efflux function and regulation within Escherichia coli and Salmonella enterica serovar Typhimurium.

Holden, Emma R; Yasir, Muhammad; Turner, A Keith; Wain, John; Charles, Ian G; Webber, Mark A.

Microbiology (Reading) ; 169(2)2023 02.

Artículo en Inglés | MEDLINE | ID: mdl-36745554

3.

Determination and quantification of microbial communities and antimicrobial resistance on food through host DNA-depleted metagenomics.

Bloomfield, Samuel J; Zomer, Aldert L; O'Grady, Justin; Kay, Gemma L; Wain, John; Janecko, Nicol; Palau, Raphaëlle; Mather, Alison E.

Food Microbiol ; 110: 104162, 2023 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-36462818

4.

Correction: Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica.

Achtman, Mark; Wain, John; Weill, François-Xavier; Nair, Satheesh; Zhou, Zhemin; Sangal, Vartul; Krauland, Mary G; Hale, James L; Harbottle, Heather; Uesbeck, Alexandra; Dougan, Gordon; Harrison, Lee H; Brisse, Sylvain.

PLoS Pathog ; 16(10): e1009040, 2020 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-33085727

5.

Diagnostic Accuracy of Endobronchial Optical Coherence Tomography for the Microscopic Diagnosis of Usual Interstitial Pneumonia.

Nandy, Sreyankar; Raphaely, Rebecca A; Muniappan, Ashok; Shih, Angela; Roop, Benjamin W; Sharma, Amita; Keyes, Colleen M; Colby, Thomas V; Auchincloss, Hugh G; Gaissert, Henning A; Lanuti, Michael; Morse, Christopher R; Ott, Harald C; Wain, John C; Wright, Cameron D; Garcia-Moliner, Maria L; Smith, Maxwell L; VanderLaan, Paul A; Berigei, Sarita R; Mino-Kenudson, Mari; Horick, Nora K; Liang, Lloyd L; Davies, Diane L; Szabari, Margit V; Caravan, Peter; Medoff, Benjamin D; Tager, Andrew M; Suter, Melissa J; Hariri, Lida P.

Am J Respir Crit Care Med ; 204(10): 1164-1179, 2021 11 15.

Artículo en Inglés | MEDLINE | ID: mdl-34375171

6.

Bactericidal activities and post-antibiotic effects of ofloxacin and ceftriaxone against drug-resistant Salmonella enterica serovar Typhi.

Wain, John; Simpson, Julie A; Thi Diem Nga, Luong; Song Diep, To; Thanh Duy, Pham; Baker, Stephen; Day, Nicholas P J; White, Nicholas J; Parry, Christopher M.

J Antimicrob Chemother ; 76(10): 2606-2609, 2021 09 15.

Artículo en Inglés | MEDLINE | ID: mdl-34179968

7.

Concomitant Bacteremia in Adults With Severe Falciparum Malaria.

Phu, Nguyen Hoan; Day, Nicholas P J; Tuan, Phung Quoc; Mai, Nguyen Thi Hoang; Chau, Tran Thi Hong; Van Chuong, Ly; Vinh, Ha; Loc, Pham Phu; Sinh, Dinh Xuan; Hoa, Nguyen Thi Tuyet; Waller, Deborah J; Wain, John; Jeyapant, Atthanee; Watson, James A; Farrar, Jeremy J; Hien, Tran Tinh; Parry, Christopher M; White, Nicholas J.

Clin Infect Dis ; 71(9): e465-e470, 2020 12 03.

Artículo en Inglés | MEDLINE | ID: mdl-32107527

8.

A whole-genome screen identifies Salmonella enterica serovar Typhi genes involved in fluoroquinolone susceptibility.

Turner, A Keith; Eckert, Sabine E; Turner, Daniel J; Yasir, Muhammud; Webber, Mark A; Charles, Ian G; Parkhill, Julian; Wain, John.

J Antimicrob Chemother ; 75(9): 2516-2525, 2020 09 01.

Artículo en Inglés | MEDLINE | ID: mdl-32514543

9.

Reply to Kalverda et al.: Endobronchial Optical Coherence Tomography: Shining New Light on Diagnosing Usual Interstitial Pneumonitis?

Nandy, Sreyankar; Raphaely, Rebecca A; Muniappan, Ashok; Shih, Angela; Roop, Benjamin W; Sharma, Amita; Keyes, Colleen M; Colby, Thomas V; Auchincloss, Hugh G; Gaissert, Henning A; Lanuti, Michael; Morse, Christopher R; Ott, Harald C; Wain, John C; Wright, Cameron D; Garcia-Moliner, Maria L; Smith, Maxwell L; VanderLaan, Paul A; Berigei, Sarita R; Mino-Kenudson, Mari; Horick, Nora K; Liang, Lloyd L; Davies, Diane L; Szabari, Margit V; Caravan, Peter; Medoff, Benjamin D; Tager, Andrew M; Suter, Melissa J; Hariri, Lida P.

Am J Respir Crit Care Med ; 205(8): 968-971, 2022 04 15.

Artículo en Inglés | MEDLINE | ID: mdl-35148493

10.

Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants.

Alcon-Giner, Cristina; Caim, Shabhonam; Mitra, Suparna; Ketskemety, Jennifer; Wegmann, Udo; Wain, John; Belteki, Gusztav; Clarke, Paul; Hall, Lindsay J.

BMC Genomics ; 18(1): 841, 2017 Nov 02.

Artículo en Inglés | MEDLINE | ID: mdl-29096601

11.

Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever.

Zhou, Zhemin; McCann, Angela; Weill, François-Xavier; Blin, Camille; Nair, Satheesh; Wain, John; Dougan, Gordon; Achtman, Mark.

Proc Natl Acad Sci U S A ; 111(33): 12199-204, 2014 Aug 19.

Artículo en Inglés | MEDLINE | ID: mdl-25092320

12.

Microevolution of Monophasic Salmonella Typhimurium during Epidemic, United Kingdom, 2005-2010.

Petrovska, Liljana; Mather, Alison E; AbuOun, Manal; Branchu, Priscilla; Harris, Simon R; Connor, Thomas; Hopkins, K L; Underwood, A; Lettini, Antonia A; Page, Andrew; Bagnall, Mary; Wain, John; Parkhill, Julian; Dougan, Gordon; Davies, Robert; Kingsley, Robert A.

Emerg Infect Dis ; 22(4): 617-24, 2016 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-26982594

13.

Typhoid fever.

Wain, John; Hendriksen, Rene S; Mikoleit, Matthew L; Keddy, Karen H; Ochiai, R Leon.

Lancet ; 385(9973): 1136-45, 2015 Mar 21.

Artículo en Inglés | MEDLINE | ID: mdl-25458731

14.

Diversity of STs, plasmids and ESBL genes among Escherichia coli from humans, animals and food in Germany, the Netherlands and the UK.

Day, Michaela J; Rodríguez, Irene; van Essen-Zandbergen, Alieda; Dierikx, Cindy; Kadlec, Kristina; Schink, Anne-Kathrin; Wu, Guanghui; Chattaway, Marie A; DoNascimento, Vivienne; Wain, John; Helmuth, Reiner; Guerra, Beatriz; Schwarz, Stefan; Threlfall, John; Woodward, Martin J; Coldham, Nick; Mevius, Dik; Woodford, Neil.

J Antimicrob Chemother ; 71(5): 1178-82, 2016 May.

Artículo en Inglés | MEDLINE | ID: mdl-26803720

15.

Neoadjuvant irinotecan, cisplatin, and concurrent radiation therapy with celecoxib for patients with locally advanced esophageal cancer.

Cleary, James M; Mamon, Harvey J; Szymonifka, Jackie; Bueno, Raphael; Choi, Noah; Donahue, Dean M; Fidias, Panos M; Gaissert, Henning A; Jaklitsch, Michael T; Kulke, Matthew H; Lynch, Thomas P; Mentzer, Steven J; Meyerhardt, Jeffrey A; Swanson, Richard S; Wain, John; Fuchs, Charles S; Enzinger, Peter C.

BMC Cancer ; 16: 468, 2016 07 13.

Artículo en Inglés | MEDLINE | ID: mdl-27412386

16.

Whole-miRNome profiling identifies prognostic serum miRNAs in esophageal adenocarcinoma: the influence of Helicobacter pylori infection status.

Zhai, Rihong; Wei, Yongyue; Su, Li; Liu, Geoffrey; Kulke, Mathew H; Wain, John C; Christiani, David C.

Carcinogenesis ; 36(1): 87-93, 2015 Jan.

Artículo en Inglés | MEDLINE | ID: mdl-25381453

17.

Whole-genome sequencing for national surveillance of Shiga toxin-producing Escherichia coli O157.

Dallman, Timothy J; Byrne, Lisa; Ashton, Philip M; Cowley, Lauren A; Perry, Neil T; Adak, Goutam; Petrovska, Liljana; Ellis, Richard J; Elson, Richard; Underwood, Anthony; Green, Jonathan; Hanage, William P; Jenkins, Claire; Grant, Kathie; Wain, John.

Clin Infect Dis ; 61(3): 305-12, 2015 Aug 01.

Artículo en Inglés | MEDLINE | ID: mdl-25888672

18.

A comparison of dense transposon insertion libraries in the Salmonella serovars Typhi and Typhimurium.

Barquist, Lars; Langridge, Gemma C; Turner, Daniel J; Phan, Minh-Duy; Turner, A Keith; Bateman, Alex; Parkhill, Julian; Wain, John; Gardner, Paul P.

Nucleic Acids Res ; 41(8): 4549-64, 2013 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-23470992

19.

Multilocus sequence typing as a replacement for serotyping in Salmonella enterica.

Achtman, Mark; Wain, John; Weill, François-Xavier; Nair, Satheesh; Zhou, Zhemin; Sangal, Vartul; Krauland, Mary G; Hale, James L; Harbottle, Heather; Uesbeck, Alexandra; Dougan, Gordon; Harrison, Lee H; Brisse, Sylvain.

PLoS Pathog ; 8(6): e1002776, 2012.

Artículo en Inglés | MEDLINE | ID: mdl-22737074

20.

Risk factors for the development of severe typhoid fever in Vietnam.

Parry, Christopher M; Thompson, Corinne; Vinh, Ha; Chinh, Nguyen Tran; Phuong, Le Thi; Ho, Vo Anh; Hien, Tran Tinh; Wain, John; Farrar, Jeremy J; Baker, Stephen.

BMC Infect Dis ; 14: 73, 2014 Feb 10.

Artículo en Inglés | MEDLINE | ID: mdl-24512443

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