Bulked segregant analysis of the pirarucu (Arapaima gigas) genome for identification of sex-specific molecular markers.
Genet Mol Res
; 12(4): 6299-308, 2013 Dec 04.
Article
in En
| MEDLINE
| ID: mdl-24338425
ABSTRACT
Arapaima gigas (Osteoglossidae) is one of the largest fish species in the Amazon Basin, attaining lengths of over 2.5 m and weights of over 100 kg. Its flesh is prized, and it has great potential for production in aquaculture systems. However, live pirarucu cannot be reliably sexed visually, even after sexual development, since this species does not have clear external sexual dimorphism. Simple and inexpensive methods for sexing immature pirarucu based on DNA markers would facilitate production of this species in commercial operations. We analyzed A. gigas male and female DNA pools with 566 RAPD primers, generating 2609 fragments, with an estimated 1341 segregating polymorphic markers, and an estimated average spacing of 714 kb, which corresponds to less than 0.1% of the species' genome. Two putative sex-specific fragments were initially identified in bulked samples; but they were not confirmed in a study of individual male and female samples. We suggest that A. gigas has developed a non-chromosomal system of sex determination or, alternatively, that the species has undergone a recent loss of the chromosome carrying the sex-determining locus.
Full text:
1
Collection:
01-internacional
Database:
MEDLINE
Main subject:
Sex Determination Analysis
/
Fishes
Type of study:
Diagnostic_studies
Limits:
Animals
Language:
En
Journal:
Genet Mol Res
Journal subject:
BIOLOGIA MOLECULAR
/
GENETICA
Year:
2013
Type:
Article
Affiliation country:
Brazil