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Whole blood FPR1 mRNA expression predicts both non-small cell and small cell lung cancer.
Morris, Scott; Vachani, Anil; Pass, Harvey I; Rom, William N; Ryden, Kirk; Weiss, Glen J; Hogarth, D K; Runger, George; Richards, Donald; Shelton, Troy; Mallery, David W.
Affiliation
  • Morris S; Viomics, Phoenix, AZ.
  • Vachani A; Penn Lung Center, University of Pennsylvania, Philadelphia, PA.
  • Pass HI; Thoracic Oncology, New York University Langone Medical Center, New York, NY.
  • Rom WN; Thoracic Oncology, New York University Langone Medical Center, New York, NY.
  • Ryden K; Viomics, Phoenix, AZ.
  • Weiss GJ; Department of Internal Medicine, University of Arizona College of Medicine-Phoenix, Phoenix, AZ.
  • Hogarth DK; Bronchoscopy and Minimally Invasive Diagnostics, University of Chicago Medicine, Chicago, IL.
  • Runger G; School of Biomedical Diagnostics, Arizona State University, Tempe, AZ.
  • Richards D; Medical Oncology, Texas Oncology, Tyler, TX.
  • Shelton T; Viomics, Phoenix, AZ.
  • Mallery DW; Viomics, Phoenix, AZ.
Int J Cancer ; 142(11): 2355-2362, 2018 06 01.
Article in En | MEDLINE | ID: mdl-29313979
While long-term survival rates for early-stage lung cancer are high, most cases are diagnosed in later stages that can negatively impact survival rates. We aim to design a simple, single biomarker blood test for early-stage lung cancer that is robust to preclinical variables and can be readily implemented in the clinic. Whole blood was collected in PAXgene tubes from a training set of 29 patients, and a validation set of 260 patients, of which samples from 58 patients were prospectively collected in a clinical trial specifically for our study. After RNA was extracted, the expressions of FPR1 and a reference gene were quantified by an automated one-step Taqman RT-PCR assay. Elevated levels of FPR1 mRNA in whole blood predicted lung cancer status with a sensitivity of 55% and a specificity of 87% on all validation specimens. The prospectively collected specimens had a significantly higher 68% sensitivity and 89% specificity. Results from patients with benign nodules were similar to healthy volunteers. No meaningful correlation was present between our test results and any clinical characteristic other than lung cancer diagnosis. FPR1 mRNA levels in whole blood can predict the presence of lung cancer. Using this as a reflex test for positive lung cancer screening computed tomography scans has the potential to increase the positive predictive value. This marker can be easily measured in an automated process utilizing off-the-shelf equipment and reagents. Further work is justified to explain the source of this biomarker.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: RNA, Messenger / Biomarkers, Tumor / Carcinoma, Non-Small-Cell Lung / Receptors, Formyl Peptide / Small Cell Lung Carcinoma / Lung Neoplasms Type of study: Clinical_trials / Diagnostic_studies / Observational_studies / Prognostic_studies / Risk_factors_studies / Screening_studies Limits: Female / Humans / Male Language: En Journal: Int J Cancer Year: 2018 Type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: RNA, Messenger / Biomarkers, Tumor / Carcinoma, Non-Small-Cell Lung / Receptors, Formyl Peptide / Small Cell Lung Carcinoma / Lung Neoplasms Type of study: Clinical_trials / Diagnostic_studies / Observational_studies / Prognostic_studies / Risk_factors_studies / Screening_studies Limits: Female / Humans / Male Language: En Journal: Int J Cancer Year: 2018 Type: Article