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Complete mitochondrial genome sequence of the "copper moss" Mielichhoferia elongata reveals independent nad7 gene functionality loss.
Goryunov, Denis V; Goryunova, Svetlana V; Kuznetsova, Oxana I; Logacheva, Maria D; Milyutina, Irina A; Fedorova, Alina V; Ignatov, Michael S; Troitsky, Aleksey V.
Affiliation
  • Goryunov DV; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Goryunova SV; Institute of General Genetics Russian Academy of Science, Moscow, Russia.
  • Kuznetsova OI; Tsitsin Main Botanical Garden Russian Academy of Science, Moscow, Russia.
  • Logacheva MD; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Milyutina IA; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Fedorova AV; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Ignatov MS; Tsitsin Main Botanical Garden Russian Academy of Science, Moscow, Russia.
  • Troitsky AV; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
PeerJ ; 6: e4350, 2018.
Article in En | MEDLINE | ID: mdl-29416956
The mitochondrial genome of moss Mielichhoferia elongata has been sequenced and assembled with Spades genome assembler. It consists of 100,342 base pairs and has practically the same gene set and order as in other known bryophyte chondriomes. The genome contains 66 genes including three rRNAs, 24 tRNAs, and 40 conserved mitochondrial proteins genes. Unlike the majority of previously sequenced bryophyte mitogenomes, it lacks the functional nad7 gene. The phylogenetic reconstruction and scrutiny analysis of the primary structure of nad7 gene carried out in this study suggest its independent pseudogenization in different bryophyte lineages. Evaluation of the microsatellite (simple sequence repeat) content of the M. elongata mitochondrial genome indicates that it could be used as a tool in further studies as a phylogenetic marker. The strongly supported phylogenetic tree presented here, derived from 33 protein coding sequences of 40 bryophyte species, is consistent with other reconstructions based on a number of different data sets.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: PeerJ Year: 2018 Type: Article Affiliation country: Russia

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: PeerJ Year: 2018 Type: Article Affiliation country: Russia