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Achieving a Good Crystal System for Crystallographic X-Ray Fragment Screening.
Collins, Patrick M; Douangamath, Alice; Talon, Romain; Dias, Alexandre; Brandao-Neto, Jose; Krojer, Tobias; von Delft, Frank.
Affiliation
  • Collins PM; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, United Kingdom.
  • Douangamath A; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, United Kingdom.
  • Talon R; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, United Kingdom.
  • Dias A; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, United Kingdom.
  • Brandao-Neto J; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, United Kingdom.
  • Krojer T; Structural Genomics Consortium, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
  • von Delft F; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, United Kingdom; Structural Genomics Consortium, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom; Department of Biochemistry, University of Johannesburg, Aukland Park, South Africa. Electronic address:
Methods Enzymol ; 610: 251-264, 2018.
Article in En | MEDLINE | ID: mdl-30390801
The XChem facility at Diamond Light Source offers fragment screening by X-ray crystallography as a general access user program. The main advantage of X-ray crystallography as a primary fragment screen is that it yields directly the location and pose of the fragment hits, whether within pockets of interest or merely on surface sites: this is the key information for structure-based design and for enabling synthesis of follow-up molecules. Extensive streamlining of the screening experiment at XChem has engendered a very active user program that is generating large amounts of data: in 2017, 36 academic and industry groups generated 35,000 datasets of uniquely soaked crystals. It has also generated a large number of learnings concerning the main remaining bottleneck, namely, obtaining a suitable crystal system that will support a successful fragment screen. Here we discuss the practicalities of generating screen-ready crystals that have useful electron density maps, and how to ensure they will be successfully reproduced and usable at a facility outside the home lab.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Proteins / Crystallography, X-Ray / Crystallization Type of study: Diagnostic_studies / Screening_studies Limits: Animals / Humans Language: En Journal: Methods Enzymol Year: 2018 Type: Article Affiliation country: United kingdom

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Proteins / Crystallography, X-Ray / Crystallization Type of study: Diagnostic_studies / Screening_studies Limits: Animals / Humans Language: En Journal: Methods Enzymol Year: 2018 Type: Article Affiliation country: United kingdom