Fecal metatranscriptomics of macaques with idiopathic chronic diarrhea reveals altered mucin degradation and fucose utilization.

Westreich, Samuel T; Ardeshir, Amir; Alkan, Zeynep; Kable, Mary E; Korf, Ian; Lemay, Danielle G

Westreich, Samuel T; Ardeshir, Amir; Alkan, Zeynep; Kable, Mary E; Korf, Ian; Lemay, Danielle G.

Affiliation

Westreich ST; Genome Center, University of California, Davis, California, USA.
Ardeshir A; California National Primate Research Center, University of California, Davis, California, USA.
Alkan Z; USDA ARS Western Human Nutrition Research Center, Davis, California, USA.
Kable ME; USDA ARS Western Human Nutrition Research Center, Davis, California, USA.
Korf I; Department of Nutrition, University of California, Davis, California, USA.
Lemay DG; Genome Center, University of California, Davis, California, USA.

Microbiome ; 7(1): 41, 2019 03 18.

Article in En | MEDLINE | ID: mdl-30885266

Subject(s)

Diarrhea/genetics; Fucose/metabolism; Gene Expression Profiling/veterinary; Metagenomics/methods; Mucins/metabolism; Animals; Bacteria/classification; Bacteria/genetics; Diarrhea/metabolism; Diarrhea/microbiology; Diarrhea/parasitology; Feces/microbiology; Gastrointestinal Microbiome; Gene Expression Regulation; Macaca mulatta; Proteolysis; Sequence Analysis, RNA/veterinary; Trichomonas/classification; Trichomonas/genetics

Key words

Colitis; Diarrhea; Dysbiosis; Fecal microbiome; Gastrointestinal; Gut microbiome; ICD; Inflammation; Macaque; Metatranscriptome; Metatranscriptomics; Microbiome; Mucin; Mucosal immunity; Pathology; RNA-seq

Fulltext

XML

PubMed Links

Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Gene Expression Profiling / Diarrhea / Metagenomics / Fucose / Mucins Limits: Animals Language: En Journal: Microbiome Year: 2019 Type: Article Affiliation country: United States

Fulltext

XML

PubMed Links

Search on Google