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Genome Data of Fusarium oxysporum f. sp. cubense Race 1 and Tropical Race 4 Isolates Using Long-Read Sequencing.
Yun, Yingzi; Song, Aixia; Bao, JianDong; Chen, Shasha; Lu, Songmao; Cheng, Chunzhen; Zheng, Wenhui; Wang, Zonghua; Zhang, Liangsheng.
Affiliation
  • Yun Y; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Song A; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Bao J; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Chen S; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Lu S; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Cheng C; College of Horticulture, Fujian Agriculture and Forestry University.
  • Zheng W; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Wang Z; State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China.
  • Zhang L; Institute of Oceanography, Minjiang University, Fuzhou, China.
Mol Plant Microbe Interact ; 32(10): 1270-1272, 2019 Oct.
Article in En | MEDLINE | ID: mdl-31063048
ABSTRACT
Fusarium wilt of banana is caused by the soilborne fungal pathogen Fusarium oxysporum f. sp. cubense. We generated two chromosome-level assemblies of F. oxysporum f. sp. cubense race 1 and tropical race 4 strains using single-molecule real-time sequencing. The F. oxysporum f. sp. cubense race 1 and tropical race 4 assemblies had 35 and 29 contigs with contig N50 lengths of 2.08 and 4.28 Mb, respectively. These two new references genomes represent a greater than 100-fold improvement over the contig N50 statistics of the previous short-read-based F. oxysporum f. sp. cubense assemblies. The two high-quality assemblies reported here will be a valuable resource for the comparative analysis of F. oxysporum f. sp. cubense races at the pathogenic level.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Fungal / Fusarium Language: En Journal: Mol Plant Microbe Interact Journal subject: BIOLOGIA MOLECULAR / BOTANICA / MICROBIOLOGIA Year: 2019 Type: Article Affiliation country: China
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome, Fungal / Fusarium Language: En Journal: Mol Plant Microbe Interact Journal subject: BIOLOGIA MOLECULAR / BOTANICA / MICROBIOLOGIA Year: 2019 Type: Article Affiliation country: China