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Taxonomic reassessment of the genus Pseudocitrobacter using whole genome sequencing: Pseudocitrobacter anthropi is a later heterotypic synonym of Pseudocitrobacter faecalis and description of Pseudocitrobacter vendiensis sp. nov.
Kämpfer, Peter; Fuglsang-Damgaard, David; Overballe-Petersen, Søren; Hasman, Henrik; Hammerum, Anette M; Fuursted, Kurt; Blom, Jochen; Glaeser, Stefanie P; Hansen, Frank.
Affiliation
  • Kämpfer P; Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany.
  • Fuglsang-Damgaard D; Department of Clinical Microbiology, Aalborg University Hospital, Aalborg, Denmark.
  • Overballe-Petersen S; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.
  • Hasman H; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.
  • Hammerum AM; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.
  • Fuursted K; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.
  • Blom J; Institute for Bioinformatics and Systems Biology, Justus-Liebig-Universität Giessen, Giessen, D-35392, Germany.
  • Glaeser SP; Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany.
  • Hansen F; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark.
Int J Syst Evol Microbiol ; 70(2): 1315-1320, 2020 Feb.
Article in En | MEDLINE | ID: mdl-31860429
ABSTRACT
The taxonomic status of all Pseudocitrobacter species was re-evaluated by comparative genomics based on whole genome sequencing. As a result, it is obvious that Pseudocitrobacter anthropi is a later heterotypic synonym of Pseudocitrobacter faecalis. In addition, genome-based analysis of strain CPO20170097T, isolated from a patient in northern Denmark was allocated to the genus Pseudocitrobacter. This strain showed significant genotypic and phenotypic differences from P. faecalis and it is proposed that this strain represents a novel species of the genus, for which the name Pseudocitrobacter vendiensis sp. nov. is proposed with the type strain CPO20170097T (=CCUG 73096T=LMG 31042T).
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phylogeny / Enterobacteriaceae Limits: Humans Country/Region as subject: Europa Language: En Journal: Int J Syst Evol Microbiol Journal subject: MICROBIOLOGIA Year: 2020 Type: Article Affiliation country: Germany
Fulltext
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phylogeny / Enterobacteriaceae Limits: Humans Country/Region as subject: Europa Language: En Journal: Int J Syst Evol Microbiol Journal subject: MICROBIOLOGIA Year: 2020 Type: Article Affiliation country: Germany