CaSpER identifies and visualizes CNV events by integrative analysis of single-cell or bulk RNA-sequencing data.

Serin Harmanci, Akdes; Harmanci, Arif O; Zhou, Xiaobo

Serin Harmanci, Akdes; Harmanci, Arif O; Zhou, Xiaobo.

Affiliation

Serin Harmanci A; Center for Computational Systems Medicine, School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Harmanci AO; Center for Precision Health, School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Zhou X; Center for Computational Systems Medicine, School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. Xiaobo.Zhou@uth.tmc.edu.

Nat Commun ; 11(1): 89, 2020 01 03.

Article in En | MEDLINE | ID: mdl-31900397

Subject(s)

Computational Biology/methods; DNA Copy Number Variations; Software; Algorithms; Alleles; Genomics; Humans; Loss of Heterozygosity; Polymorphism, Single Nucleotide; Sequence Analysis, RNA; Single-Cell Analysis

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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Software / Computational Biology / DNA Copy Number Variations Type of study: Evaluation_studies Limits: Humans Language: En Journal: Nat Commun Journal subject: BIOLOGIA / CIENCIA Year: 2020 Type: Article Affiliation country: United States

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