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Patient-specific fine-tuning of convolutional neural networks for follow-up lesion quantification.
Jansen, Mariëlle J A; Kuijf, Hugo J; Dhara, Ashis K; Weaver, Nick A; Jan Biessels, Geert; Strand, Robin; Pluim, Josien P W.
Affiliation
  • Jansen MJA; University Medical Center Utrecht and Utrecht University, Image Sciences Institute, Utrecht, The Netherlands.
  • Kuijf HJ; University Medical Center Utrecht and Utrecht University, Image Sciences Institute, Utrecht, The Netherlands.
  • Dhara AK; Uppsala University, Center for Image Analysis, Department of Information Technology, Uppsala, Sweden.
  • Weaver NA; University Medical Center Utrecht, Brain Center Rudolf Magnus, Department of Neurology, Utrecht, The Netherlands.
  • Jan Biessels G; University Medical Center Utrecht, Brain Center Rudolf Magnus, Department of Neurology, Utrecht, The Netherlands.
  • Strand R; Uppsala University, Center for Image Analysis, Department of Information Technology, Uppsala, Sweden.
  • Pluim JPW; University Medical Center Utrecht and Utrecht University, Image Sciences Institute, Utrecht, The Netherlands.
J Med Imaging (Bellingham) ; 7(6): 064003, 2020 Nov.
Article in En | MEDLINE | ID: mdl-33344673
ABSTRACT

Purpose:

Convolutional neural network (CNN) methods have been proposed to quantify lesions in medical imaging. Commonly, more than one imaging examination is available for a patient, but the serial information in these images often remains unused. CNN-based methods have the potential to extract valuable information from previously acquired imaging to better quantify lesions on current imaging of the same patient.

Approach:

A pretrained CNN can be updated with a patient's previously acquired imaging patient-specific fine-tuning (FT). In this work, we studied the improvement in performance of lesion quantification methods on magnetic resonance images after FT compared to a pretrained base CNN. We applied the method to two different approaches the detection of liver metastases and the segmentation of brain white matter hyperintensities (WMH).

Results:

The patient-specific fine-tuned CNN has a better performance than the base CNN. For the liver metastases, the median true positive rate increases from 0.67 to 0.85. For the WMH segmentation, the mean Dice similarity coefficient increases from 0.82 to 0.87.

Conclusions:

We showed that patient-specific FT has the potential to improve the lesion quantification performance of general CNNs by exploiting a patient's previously acquired imaging.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: J Med Imaging (Bellingham) Year: 2020 Type: Article Affiliation country: Netherlands

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: J Med Imaging (Bellingham) Year: 2020 Type: Article Affiliation country: Netherlands