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Validation of a direct-to-PCR COVID-19 detection protocol utilizing mechanical homogenization: A model for reducing resources needed for accurate testing.
Morehouse, Zachary P; Samikwa, Lyson; Proctor, Caleb M; Meleke, Harry; Kamdolozi, Mercy; Ryan, Gabriella L; Chaima, David; Ho, Antonia; Nash, Rodney J; Nyirenda, Tonney S.
Affiliation
  • Morehouse ZP; Michigan State University College of Osteopathic Medicine, East Lansing, Michigan, United States of America.
  • Samikwa L; Omni International Inc, A PerkinElmer Company, Kennesaw, Georgia, United States of America.
  • Proctor CM; Jeevan BioSciences, Tucker, Georgia, United States of America.
  • Meleke H; Department of Pathology, College of Medicine, University of Malawi, Blantyre, Malawi.
  • Kamdolozi M; Omni International Inc, A PerkinElmer Company, Kennesaw, Georgia, United States of America.
  • Ryan GL; Department of Pathology, College of Medicine, University of Malawi, Blantyre, Malawi.
  • Chaima D; Department of Pathology, College of Medicine, University of Malawi, Blantyre, Malawi.
  • Ho A; Omni International Inc, A PerkinElmer Company, Kennesaw, Georgia, United States of America.
  • Nash RJ; Department of Pathology, College of Medicine, University of Malawi, Blantyre, Malawi.
  • Nyirenda TS; MRC-University of Glasgow Centre for Virus Research, Glasgow, United Kingdom.
PLoS One ; 16(8): e0256316, 2021.
Article in En | MEDLINE | ID: mdl-34407126
Efficient and effective viral detection methodologies are a critical piece in the global response to COVID-19, with PCR-based nasopharyngeal and oropharyngeal swab testing serving as the current gold standard. With over 100 million confirmed cases globally, the supply chains supporting these PCR testing efforts are under a tremendous amount of stress, driving the need for innovative and accurate diagnostic solutions. Herein, the utility of a direct-to-PCR method of SARS-CoV-2 detection grounded in mechanical homogenization is examined for reducing resources needed for testing while maintaining a comparable sensitivity to the current gold standard workflow of nasopharyngeal and oropharyngeal swab testing. In a head-to-head comparison of 30 patient samples, this initial clinical validation study of the proposed homogenization-based workflow demonstrated significant agreeability with the current extraction-based method utilized while cutting the total resources needed in half.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Specimen Handling / COVID-19 Nucleic Acid Testing / SARS-CoV-2 / COVID-19 Type of study: Diagnostic_studies / Observational_studies / Prognostic_studies Limits: Humans Language: En Journal: PLoS One Journal subject: CIENCIA / MEDICINA Year: 2021 Type: Article Affiliation country: United States

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Specimen Handling / COVID-19 Nucleic Acid Testing / SARS-CoV-2 / COVID-19 Type of study: Diagnostic_studies / Observational_studies / Prognostic_studies Limits: Humans Language: En Journal: PLoS One Journal subject: CIENCIA / MEDICINA Year: 2021 Type: Article Affiliation country: United States