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Insight into telomere regulation: road to discovery and intervention in plasma drug-protein targets.
Ding, Kaixi; Zhangwang, Juejue; Lei, Ming; Xiong, Chunping.
Affiliation
  • Ding K; School of Clinical Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, 610075, China.
  • Zhangwang J; School of Clinical Medicine, Chengdu University of Traditional Chinese Medicine, Chengdu, 610075, China.
  • Lei M; Hospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610075, China.
  • Xiong C; Hospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610075, China. minglei2828@126.com.
BMC Genomics ; 25(1): 231, 2024 Mar 02.
Article in En | MEDLINE | ID: mdl-38431573
ABSTRACT

BACKGROUND:

Telomere length is a critical metric linked to aging, health, and disease. Currently, the exploration of target proteins related to telomere length is usually limited to the context of aging and specific diseases, which limits the discovery of more relevant drug targets. This study integrated large-scale plasma cis-pQTLs data and telomere length GWAS datasets. We used Mendelian randomization(MR) to identify drug target proteins for telomere length, providing essential clues for future precision therapy and targeted drug development.

METHODS:

Using plasma cis-pQTLs data from a previous GWAS study (3,606 Pqtls associated with 2,656 proteins) and a GWAS dataset of telomere length (sample size 472,174; GWAS ID ieu-b-4879) from UK Biobank, using MR, external validation, and reverse causality testing, we identified essential drug target proteins for telomere length. We also performed co-localization, Phenome-wide association studies and enrichment analysis, protein-protein interaction network construction, search for existing intervening drugs, and potential drug/compound prediction for these critical targets to strengthen and expand our findings.

RESULTS:

After Bonferron correction (p < 0.05/734), RPN1 (OR 0.96; 95%CI (0.95, 0.97)), GDI2 (OR 0.94; 95%CI (0.92, 0.96)), NT5C (OR 0.97; 95%CI (0.95, 0.98)) had a significant negative causal association with telomere length; TYRO3 (OR 1.11; 95%CI (1.09, 1.15)) had a significant positive causal association with telomere length. GDI2 shared the same genetic variants with telomere length (coloc.abf-PPH 4 > 0.8).

CONCLUSION:

Genetically determined plasma RPN1, GDI2, NT5C, and TYRO3 have significant causal effects on telomere length and can potentially be drug targets. Further exploration of the role and mechanism of these proteins/genes in regulating telomere length is needed.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Drug Delivery Systems / Genome-Wide Association Study Language: En Journal: BMC Genomics Journal subject: GENETICA Year: 2024 Type: Article Affiliation country: China

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Drug Delivery Systems / Genome-Wide Association Study Language: En Journal: BMC Genomics Journal subject: GENETICA Year: 2024 Type: Article Affiliation country: China