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Common conditions of use elements. Atomic concepts for consistent and effective information governance.
Sanchez Gonzalez, Maria Del Carmen; Kamerling, Pim; Iermito, Mariapia; Casati, Sara; Riaz, Umar; Veal, Colin D; Maini, Monika; Jeanson, Francis; Benhamed, Oussama Mohammed; van Enckevort, Esther; Landi, Annalisa; Mimouni, Yanis; Le Cornec, Clèmence; Coviello, Domenico A; Franchin, Tiziana; Fusco, Francesca; Ramírez García, Jose Antonio; van der Zanden, Loes F M; Bernier, Alexander; Wilkinson, Mark D; Mueller, Heimo; Gibson, Spencer J; Brookes, Anthony J.
Affiliation
  • Sanchez Gonzalez MDC; Institute for Rare Diseases Research (IIER), Instituto de Salud Carlos III, Av. Monforte de Lemos, 5 PC, 28029, Madrid, Spain. mcsanchez@isciii.es.
  • Kamerling P; VASCERN ERN & Radboud University Medical Center - Center for Radiology and Nuclear Medicine, Geert Grooteplein Zuid 26-28 (route 260), 6525 GA, Nijmegen, The Netherlands.
  • Iermito M; Istituto Neurologico "Carlo Besta" |, Fondazione IRCCS Via Giovanni Celoria, 11, 20133, Milano, MI, Italy.
  • Casati S; BBMRI-ERIC, Neue Stiftingtalstrasse 2/B/6, 8010, Graz, Austria.
  • Riaz U; Dept. Genetics and Genome Biology, University of Leicester, University Road, Leicester, LE1 7RH, UK.
  • Veal CD; Dept. Genetics and Genome Biology, University of Leicester, University Road, Leicester, LE1 7RH, UK.
  • Maini M; Dept. Genetics and Genome Biology, University of Leicester, University Road, Leicester, LE1 7RH, UK.
  • Jeanson F; Ontario Brain Institute, Centre for Analytics, 1 Richmond St. West, Suite 400, Toronto, Ontario, M5H3W4, Canada.
  • Benhamed OM; Departamento de Biotecnología-Biología Vegetal, ETSI Agronómica, Alimentaria y de Biosistemas, Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA/CSIC), Universidad Politécnica de Madrid, Madrid, 28040, Spain.
  • van Enckevort E; Department of Genetics, University Medical Center Groningen, University of Groningen, Hanzeplein 1, 9713GZ, Groningen, Nederland.
  • Landi A; Fondazione per la Ricerca Farmacologica Gianni Benzi onlus, Via Giulio Petroni, 91/D, 70124, Bari, Italy.
  • Mimouni Y; Thematic Institute of Genetics, Genomics & Bioinformatics, INSERM, Paris, 75013, France.
  • Le Cornec C; Pediatric Nephrology Division, Center for Pediatrics and Adolescent Medicine, Heidelberg University Hospita, Im Neuenheimer Feld 130.3, 69120, Heidelberg, Germany.
  • Coviello DA; Dept. Laboratory of Human Genetics, IRCCS Istituto Giannina Gaslini, Via Gerolamo Gaslini 5, 16147, Genova, Italy.
  • Franchin T; Research Biobank, IRCCS Bambino Gesù Children's Hospital, Rome, Italy.
  • Fusco F; Institute of Genetics and Biophysics "Adriano Buzzati- Traverso" IGB-ABT, Department of Biomedical Sciences (DSB), National Research Council (CNR), Via P. Castellino 111, 80131, Naples, Italy.
  • Ramírez García JA; Pediatric Nephrology Division, Center for Pediatrics and Adolescent Medicine, Heidelberg University Hospita, Im Neuenheimer Feld 130.3, 69120, Heidelberg, Germany.
  • van der Zanden LFM; ERN for Rare Urogenital Diseases and Complex Conditions (ERN eUROGEN), department of Urology & IQ Health science department, Radboud university medical center, Geert Grooteplein Zuid 10, 6525 GA, Nijmegen, the Netherlands.
  • Bernier A; Centre of Genomics and Policy, McGill University, Faculty of Medicine and Health Sciences, 740, avenue Dr. Penfield, suite 5200, Montreal, Quebec, H3A 0G1, Canada.
  • Wilkinson MD; Departamento de Biotecnología-Biología Vegetal, ETSI Agronómica, Alimentaria y de Biosistemas, Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA/CSIC), Universidad Politécnica de Madrid, Madrid, 28040, Spain.
  • Mueller H; BBMRI-ERIC, Neue Stiftingtalstrasse 2/B/6, 8010, Graz, Austria.
  • Gibson SJ; Dept. Genetics and Genome Biology, University of Leicester, University Road, Leicester, LE1 7RH, UK. sg307@leicester.ac.uk.
  • Brookes AJ; Dept. Genetics and Genome Biology, University of Leicester, University Road, Leicester, LE1 7RH, UK.
Sci Data ; 11(1): 465, 2024 May 08.
Article in En | MEDLINE | ID: mdl-38719810
ABSTRACT
Myriad policy, ethical and legal considerations underpin the sharing of biological resources, implying the need for standardised and yet flexible ways to digitally represent diverse 'use conditions'. We report a core lexicon of terms that are atomic, non-directional 'concepts of use', called Common Conditions of use Elements. This work engaged biobanks and registries relevant to the European Joint Programme for Rare Diseases and aimed to produce a lexicon that would have generalised utility. Seventy-six concepts were initially identified from diverse real-world settings, and via iterative rounds of deliberation and user-testing these were optimised and condensed down to 20 items. To validate utility, support software and training information was provided to biobanks and registries who were asked to create Sharing Policy Profiles. This succeeded and involved adding standardised directionality and scope annotations to the employed terms. The addition of free-text parameters was also explored. The approach is now being adopted by several real-world projects, enabling this standard to evolve progressively into a universal basis for representing and managing conditions of use.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Biological Specimen Banks Limits: Humans Language: En Journal: Sci Data Year: 2024 Type: Article Affiliation country: Spain

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Biological Specimen Banks Limits: Humans Language: En Journal: Sci Data Year: 2024 Type: Article Affiliation country: Spain