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1.
Mol Biol Rep ; 50(12): 10663-10669, 2023 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-37924449

RESUMEN

OBJECTIVES: The most prevalent sensory disease in humans is deafness. A variety of genes have been linked to hearing loss, which can either be isolated (non-syndromic) or associated with lesions in other organs (syndromic). It has been discovered that WHRN variants are responsible for non-syndromic hearing loss and Usher syndrome type II. METHODS AND RESULTS: Exome sequencing in a consanguineous Moroccan patient with severe hearing loss identified a single homozygous mutation c.619G > T; p.Ala207Ser in WHRN, encoding a cytoskeletal scaffold protein that binds membrane protein complexes to the cytoskeleton in ocular photoreceptors and ear hair cell stereocilia. Bioinformatics methods and molecular dynamic modeling were able to predict the pathogenic implications of this variation. CONCLUSION: We used whole exome sequencing to find a homozygous WHRN gene variant in a Moroccan family. Numerous bioinformatics methods predict that this modification might result in a change in the WHRN protein's structure.


Asunto(s)
Síndromes de Usher , Humanos , Citoesqueleto , Secuenciación del Exoma , Modelos Moleculares , Mutación/genética , Linaje , Síndromes de Usher/genética
2.
Biochem Genet ; 61(5): 1758-1774, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-36792840

RESUMEN

Obesity is a global epidemic disease representing the fifth leading cause of death in the world. It was shown that it is caused by the interaction between environmental factors and genes including leptin gene (LEP). This paper aimed to analyze the association between the LEP gene polymorphisms rs7799039 and rs11761556 with obesity in Moroccan individuals as well as to perform an update meta-analysis of this genetic association. Both polymorphisms were genotyped in 146 obesity patients and 104 controls using real-time PCR technique. The genetic association analysis and the comparison of quantitative parameters were carried out using the R language. Moreover, a meta-analysis including 20 genetic association studies was performed using Review Manager 5.3 software. No significant association was found between the polymorphisms rs7799039 and rs11761556 and the risk of obesity. The comparison of biochemical and clinical parameters between the genotypes of the rs7799039 polymorphism, showed a significant increased triglycerides levels in carriers of AA or GA genotypes (P value = 0.040). The meta-analysis showed no significant association between the rs7799039 polymorphism and obesity under all genetic models. In conclusion, the case-control study and meta-analysis demonstrated that the LEP gene polymorphisms rs7799039 and rs11761556 cannot be considered as genetic risk factors for obesity.


Asunto(s)
Leptina , Polimorfismo de Nucleótido Simple , Humanos , Leptina/genética , Estudios de Casos y Controles , Receptores de Leptina/genética , Obesidad/genética , Genotipo , Predisposición Genética a la Enfermedad
3.
Biochem Genet ; 2023 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-37777971

RESUMEN

One of the most prevalent sensorineural disorders, autosomal recessive non-syndromic hearing loss (ARNSHL) which can affect all age groups, from the newborn (congenital) to the elderly (presbycusis). Important etiologic, phenotypic, and genotypic factors can cause deafness. So far, the high genetic variability that explains deafness makes molecular diagnosis challenging. In Morocco, the GJB2 gene is the primary cause of non-syndromic hereditary deafness, while the existence of a variant in the LRTOMT gene is the second cause of this condition. After excluding these two frequently occurring GJB2 and LRTOMT variants, whole-exome sequencing was carried out in two Moroccan consanguineous families with hearing loss. As a result, two novel variants in the TMPRSS3 (c.1078G>A, p. Ala 360Thr) and FOXI1 (c.6C>G, p. Ser 2Arg) genes have been discovered in deaf patients and the pathogenic effect has been anticipated by several bioinformatics and molecular modeling systems. For the first time, these variants are identified in the Moroccan population, showing the population heterogeneity and demonstrating the value of the WES in hearing loss diagnosis.

4.
Annu Rev Genomics Hum Genet ; 20: 155-179, 2019 08 31.
Artículo en Inglés | MEDLINE | ID: mdl-31039041

RESUMEN

North Africa is defined as the geographical region separated from the rest of the continent by the Sahara and from Europe by the Mediterranean Sea. The main demographic features of North African populations are their familial structure and high rates of familial and geographic endogamy, which have a proven impact on health, particularly the occurrence of genetic diseases, with a greater effect on the frequency and spectrum of the rarest forms of autosomal recessive genetic diseases. More than 500 different genetic diseases have been reported in this region, most of which are autosomal recessive. During the last few decades, there has been great interest in the molecular investigation of large consanguineous North African families. The development of local capacities has brought a substantial improvement in the molecular characterization of these diseases, but the genetic bases of half of them remain unknown. Diseases of known molecular etiology are characterized by their genetic and mutational heterogeneity, although some founder mutations are encountered relatively frequently. Some founder mutations are specific to a single country or a specific ethnic or geographic group, and others are shared by all North African countries or worldwide. The impact of consanguinity on common multifactorial diseases is less evident.


Asunto(s)
Enfermedades Transmisibles/genética , Consanguinidad , Enfermedades Genéticas Congénitas/genética , Neoplasias/genética , Enfermedades Neurodegenerativas/genética , África del Norte/epidemiología , Enfermedades Transmisibles/complicaciones , Enfermedades Transmisibles/etnología , Enfermedades Transmisibles/patología , Etnicidad , Femenino , Efecto Fundador , Genes Recesivos , Enfermedades Genéticas Congénitas/complicaciones , Enfermedades Genéticas Congénitas/etnología , Enfermedades Genéticas Congénitas/patología , Heterogeneidad Genética , Humanos , Masculino , Mutación , Neoplasias/complicaciones , Neoplasias/etnología , Neoplasias/patología , Enfermedades Neurodegenerativas/complicaciones , Enfermedades Neurodegenerativas/etnología , Enfermedades Neurodegenerativas/patología , Índice de Severidad de la Enfermedad
5.
Mol Vis ; 27: 17-25, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33633436

RESUMEN

Purpose: Progressive inherited retinal dystrophies, characterized by degeneration of rod photoreceptors and then cone photoreceptors, are known as retinitis pigmentosa (RP), for which 89 genes have been identified. Today, only five Moroccan families with RP with a genetic diagnosis have been reported, justifying our investment in providing further clinical and genetic investigations of families with RP in Morocco. Methods: The clinical diagnosis based on a combination of a history of night blindness, abnormal rod or rod-cone responses in electroretinography (ERG), and constricted visual field or difficulty perceiving side objects identified three Moroccan families with an RP phenotype. Probands of these families underwent whole exome sequencing (WES), and candidate variants were evaluated for their segregation within family members. Results: All patients had a history of night blindness and unrecordable rod and cone ERG traces. In addition, one patient had cystoid macular edema, and another had discrete autofluorescence abnormalities, in addition to ellipsoid zone disorganization and narrowed retinal vessels. WES sequencing revealed heterozygous compound mutations in CRB1:c.1690G>T//c.1913C>T and in ABCA4:c.5908C>T//c.6148G>C and a homozygous PDE6B splice mutation c.1920+2T>C. Conclusions: We provide the first description of Moroccan patients with the RP phenotype harboring pathogenic mutations in the CRB1 and ABCA4 genes and the second description of an individual with RP with a PDE6B mutation, associated with cystoid macular edema. These data contribute to expand the genetic diagnosis of RP phenotypes in Morocco.


Asunto(s)
Transportadoras de Casetes de Unión a ATP/genética , Población Negra/genética , Fosfodiesterasas de Nucleótidos Cíclicos Tipo 6/genética , Proteínas del Ojo/genética , Proteínas de la Membrana/genética , Mutación/genética , Proteínas del Tejido Nervioso/genética , Retinitis Pigmentosa/genética , Adolescente , Consanguinidad , Análisis Mutacional de ADN , Electrorretinografía , Femenino , Humanos , Masculino , Marruecos/epidemiología , Ceguera Nocturna/diagnóstico por imagen , Ceguera Nocturna/epidemiología , Ceguera Nocturna/genética , Ceguera Nocturna/fisiopatología , Linaje , Fenotipo , Retinitis Pigmentosa/diagnóstico por imagen , Retinitis Pigmentosa/epidemiología , Retinitis Pigmentosa/fisiopatología , Interacción Bastón-Cono/genética , Tomografía de Coherencia Óptica , Campos Visuales , Secuenciación del Exoma , Adulto Joven
6.
Mol Biol Rep ; 48(10): 6999-7006, 2021 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-34553317

RESUMEN

BACKGROUND: Congenital myasthenic syndromes (CMS) are associated with defects in the structure and the function of neuromuscular junctions. These rare disorders can result from mutations in the collagenic tail of endplate acetylcholinesterase (COLQ) essentially associated with autosomal recessive inheritance. With the lowered cost of genetic testing and increased access to next-generation sequencing, many mutations have been reported to date. METHODS AND RESULTS: In this study we identified the first COLQ homozygous mutation c.1193T>A in the North African population. This study outlines the genetic and phenotypic features of a CMS patient in a Moroccan family. It also describes a novel COLQ missense mutation associated with CMS-5. CONCLUSION: COLQ mutations are probably underdiagnosed in these North African populations, this is an issue as CMS-5 may be treated with ephedrine, and albuterol. Indeed, patients can seriously benefit and even recover after the treatment that should be planned according to genetic tests and clinical findings.


Asunto(s)
Síndromes Miasténicos Congénitos/genética , Acetilcolinesterasa/genética , África del Norte , Secuencia de Bases , Colágeno/genética , Femenino , Predisposición Genética a la Enfermedad , Humanos , Masculino , Proteínas Musculares/genética , Mutación/genética , Linaje
7.
Hum Hered ; 85(1): 35-39, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-33486474

RESUMEN

INTRODUCTION: Auditory neuropathy is a hearing disorder where outer hair cell function within the cochlea is normal, but inner hair cell and/or the auditory nerve function is disrupted. It is a heterogeneous disorder, which can have either congenital or acquired causes. METHODS: We found a disease-segregating mutation in the X-linked AIFM1 gene through whole-exome sequencing, encoding the apoptosis-inducing factor mitochondrion-associated 1. RESULTS: The impact of the c.1045A>G; p.(Ser349Gly) mutation on the AIFM1 protein was predicted using different bioinformatics tools. The pedigree analysis in the examined family was consistent with X-linked dominant inheritance. DISCUSSION/CONCLUSION: To our knowledge, this is the first study that identifies a mutation in the AIFM1 gene in Moroccan patients suffering from X-linked auditory neuropathy.


Asunto(s)
Factor Inductor de la Apoptosis/genética , Enfermedades Genéticas Ligadas al Cromosoma X/genética , Pérdida Auditiva Central/genética , Adolescente , Adulto , Biología Computacional , Femenino , Humanos , Masculino , Marruecos , Linaje , Secuenciación del Exoma
8.
J Clin Immunol ; 40(1): 96-104, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31696364

RESUMEN

Autosomal recessive agammaglobulinemia (ARA) is a primary immunodeficiency characterized by absent peripheral B cells, severe hypogammaglobulinemia, and absent BTK gene mutations. In ARA, mutations occur in genes encoding the pre-B cell receptor (pre-BCR) or downstream signaling proteins. In this work, we used candidate gene and whole-exome sequencing to investigate the molecular basis of ARA in 6 patients from 4 consanguineous North-African families. Sanger sequencing of candidate genes encoding the pre-BCR components (ΙGΗΜ, CD79A, CD79B, IGLL1, and VPREB1) was initially performed and determined the genetic defect in five patients. Two novel mutations in IGHM (p.Val378Alafs*1 and p.Ile184Serfs*21) were identified in three patients from two unrelated kindred and a novel nonsense mutation was identified in CD79A (p.Trp66*) in two siblings from a third kindred. Whole-exome sequencing (WES) was performed on the sixth patient who harbored a homozygous stop mutation at position 407 in the RAG2 gene (p.Glu407*). We concluded that conventional gene sequencing, especially when multiple genes are involved in the defect as is the case in ARA, is costly and time-consuming, resulting in delayed diagnosis that contributes to increased morbidity and mortality. In addition, it fails to identify the involvement of novel and unsuspected gene defects when the phenotype of the patients is atypical. WES has the potential to provide a rapid and more accurate genetic diagnosis in ARA, which is crucial for the treatment of the patients.


Asunto(s)
Agammaglobulinemia/diagnóstico , Agammaglobulinemia/genética , Preescolar , Codón sin Sentido/genética , Consanguinidad , Exoma/genética , Femenino , Homocigoto , Humanos , Lactante , Recién Nacido , Masculino , América del Norte , Linaje , Fenotipo , Polimorfismo de Nucleótido Simple/genética , Análisis de Secuencia de ADN/métodos , Secuenciación del Exoma/métodos
9.
Hum Hered ; 84(6): 272-278, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-33075768

RESUMEN

BACKGROUND: The recombination-activating gene 1 and 2 (RAG1/RAG2) proteins are essential to initiate the V(D)J recombination process, the result is a diverse repertoire of antigen receptor genes and the establishment of the adaptive immunity. RAG1 mutations can lead to multiple forms of combined immunodeficiency. METHODS: In this report, whole exome sequencing was performed in a Moroccan child suffering from combined immunodeficiency, with T and B lymphopenia, autoimmune hemolytic anemia, and cytomegalovirus (CMV) infection. RESULTS: After filtering data and Sanger sequencing validation, one homozygous mutation c.2446G>A (p.Gly816Arg) was identified in the RAG1 gene. CONCLUSION: This finding expands the spectrum of immunological and genetic profiles linked to RAG1 mutation, it also illustrates the necessity to consider RAG1 immunodeficiency in the presence of autoimmune hemolytic anemia and CMV infection, even assuming the immunological phenotype appears more or less normal.

10.
Hum Hered ; 84(3): 109-116, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-31801140

RESUMEN

Mutations in the mesenchymal epithelial transition factor (MET) gene are frequently associated with multiple human cancers but can also lead to human non-syndromic autosomal recessive deafness (DFNB97). In the present study, we identified a novel homozygous missense mutation in the METgene causing a non-syndromic hearing impairment DFNB97 form. Whole-exome sequencing was performed to determine the genetic causes of hearing loss in a Moroccan consanguineous family with an affected daughter. The structural analysis of native and mutant in the SEMA domain of the MET receptor was investigated using a molecular dynamics simulation (MDS) approach. We identified a novel pathogenic homozygous c.948A>G (p.Ile316Met) mutation in the MET gene in one deaf Moroccan young girl carrying a total bilateral non-syndromic hearing impairment. The results of the MDS approach show that an Ile316Met mutation in the SEMA domain leads to protein flexibility loss. This may produce a major impact on the structural conformation of the MET receptor, which also affects the function and binding site of the receptor. This is the first time that a mutation in the MET gene is described in a Moroccan family. Moreover, this study reports the second family in the world associating deafness and mutation in the MET gene.


Asunto(s)
Pérdida Auditiva Sensorineural/genética , Proteínas Proto-Oncogénicas c-met/genética , Niño , Consanguinidad , Femenino , Humanos , Simulación de Dinámica Molecular , Mutación Missense , Linaje , Secuenciación Completa del Genoma
11.
Am J Med Genet A ; 179(8): 1516-1524, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-31207162

RESUMEN

The aim of the present study was to determine the frequency and nature of chromosomal abnormalities involved in patients with the clinical spectrum of ambiguous genitalia (AG), amenorrhea, and Turner phenotype, in order to compare them with those reported elsewhere. The study was conducted in the Cytogenetic Department of Pasteur Institute of Morocco, and it reports on the patients who were recruited between 1996 and 2016. Cytogenetic analysis was performed according to the standard method. Among 1,415 patients, chromosomal abnormalities were identified in 7.13% (48/673) of patients with AG, 17.39% (28/161) of patients with primary amenorrhea (PA), 4% (1/25) of patients with secondary amenorrhea, and 23.20% (129/556) of patients with Turner phenotype. However, Turner syndrome was diagnosed in 0.89% (6/673) of patients with AG, 10.56% (17/161) of patients with PA, and 19.78% (110/556) of patients with Turner phenotype. In addition, Klinefelter syndrome and mixed gonadal dysgenesis were confirmed in 2.97% and 1.93% of patients, respectively, with AG, while, chimerism, trisomy 8, and trisomy 13 were confirmed only in 0.15% each. Trisomy 21 was confirmed in patients with AG and Turner phenotype (0.15% and 0.36%, respectively). Moreover, 5.60% (9/161) of patients with PA have been diagnosed as having sex reversal. Thus, the frequency of chromosomal abnormalities observed in Moroccan patients with PA is comparable to that reported in Tunisia, Turkey, Iran, and Hong Kong. However, the frequency is significantly less than that identified in India, Malaysia, Italy, and Romania.


Asunto(s)
Centros Médicos Académicos/historia , Amenorrea/genética , Trastornos del Desarrollo Sexual/genética , Síndrome de Turner/genética , Adulto , Amenorrea/epidemiología , Amenorrea/patología , Quimerismo/estadística & datos numéricos , Cromosomas Humanos Par 8/genética , Trastornos del Desarrollo Sexual/epidemiología , Trastornos del Desarrollo Sexual/patología , Síndrome de Down/epidemiología , Síndrome de Down/genética , Síndrome de Down/patología , Femenino , Disgenesia Gonadal Mixta/epidemiología , Disgenesia Gonadal Mixta/genética , Disgenesia Gonadal Mixta/patología , Historia del Siglo XX , Historia del Siglo XXI , Humanos , Incidencia , Cariotipificación , Síndrome de Klinefelter/epidemiología , Síndrome de Klinefelter/genética , Síndrome de Klinefelter/patología , Masculino , Marruecos/epidemiología , Estudios Retrospectivos , Trisomía/genética , Trisomía/patología , Síndrome de la Trisomía 13/epidemiología , Síndrome de la Trisomía 13/genética , Síndrome de la Trisomía 13/patología , Síndrome de Turner/epidemiología , Síndrome de Turner/patología
12.
Hum Hered ; 83(5): 274-282, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-31064002

RESUMEN

BACKGROUND: Intellectual disability (ID) has been defined as a considerably reduced ability to understand new or complex information and to learn new skills. It is associated with life-long intellectual and adaptive functioning impairments that have a profound impact on individuals, families, and society. It affects about 3% of the general population. ID often comes out with other mental conditions like attention deficit, hyperactivity, and autism spectrum disorders (ASD), and it can be part of a malformation syndrome that affects other organs. It may be syndromic (S-ID) or non-syndromic (NS-ID). OBJECTIVE: The aims of this study were to identify the profile of intellectually disable patients being referred for cytogenetic analysis in Morocco, to determine the prevalence of chromosomal abnormalities in a Moroccan group, and to compare the results with those of analogous studies from other countries. PARTICIPANTS: We included data from Moroccan patients with NS-ID and others with S-ID (mostly Down syndrome cases) who have been referred between 1996 and 2016. 1,626 patients were involved in this study, 1,200 were referred with a clinical diagnosis of Down syndrome, 37 were clinically diagnosed for ASD with ID, and 389 were suspected of NS-ID. RESULTS: We identified 1,200 cases of Down syndrome. In 1,096 analyses (91.3%), a cytogenetic variant of trisomy 21 was identified: standard trisomy 21 in 1,037 cases (94.6%), a translocation in 34 cases (3.10%), and mosaicism in 25 cases (2.3%). The cytogenetic analysis among ASD with ID cases did not reveal any specific chromosomal abnormalities. The present study also shows that chromosomal abnormalities were present in 6.43% of the patients with NS-ID (25 abnormal karyotypes out of 389 NS-ID cases). Autosomal structural abnormalities were the largest proportion of chromosomal aberrations. CONCLUSION: The high rate of chromosomal abnormalities found in the Moroccan patients studied demonstrates the capital importance of cytogenetic evaluation in patients who show ID or any clinical development abnormality.


Asunto(s)
Aberraciones Cromosómicas , Discapacidad Intelectual/genética , Adolescente , Niño , Preescolar , Humanos , Marruecos , Estudios Retrospectivos , Síndrome , Adulto Joven
13.
J Assist Reprod Genet ; 36(3): 499-507, 2019 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-30470960

RESUMEN

PURPOSE: The aim of this study is to evaluate the frequency and nature of chromosomal abnormalities in Moroccan couples with recurrent spontaneous miscarriage (RSM). In addition, the data were compared with those reported elsewhere in order to give a global estimation of chromosomal abnormalities frequencies. METHODS: The study was performed for all couples with RSM who were referred to the cytogenetic department, Pasteur Institute of Morocco, from different hospitals in Morocco between 1996 and 2016. Cytogenetic analysis was performed according to the standard method. RESULTS: Among 627 couples with RSM, the chromosomal abnormalities were identified in 11.00% of couples, with chromosomal inversions in 4.30%, reciprocal translocations in 2.71%, Robertsonian translocations in 1.43%, and deletion, isochromosome, and insertion in 0.15% each. The insertion identified [46,XX,ins(6)(p24q21q27)] is new, and is the fourth reported in association with RSM. The mosaic karyotypes were observed in 0.64%, polymorphic variants were identified in 1.27%, and numerical aneuploidy was observed in 0.15%. In regrouping our results with those in 27 other studies already published in 21 different countries, we obtained the frequency of chromosomal abnormalities in couple with RSM to be 5.16% (991/19197 couples). The reciprocal translocation was the most frequent with 2.50%, followed by Robertsonian translocation 0.83% and inversions 0.77%. The other types of chromosomal abnormalities were present with 0.98% in the world. CONCLUSION: This data showed that the frequency of chromosomal abnormalities in Moroccan couples with RSM is 11.00%, and in regrouping our results with other studies, the frequency changes to 5.16%.


Asunto(s)
Aborto Habitual/genética , Aberraciones Cromosómicas , Trastornos de los Cromosomas/genética , Translocación Genética , Aborto Habitual/fisiopatología , Adulto , Trastornos de los Cromosomas/fisiopatología , Inversión Cromosómica/genética , Análisis Citogenético , Citogenética/métodos , Femenino , Humanos , Cariotipo , Cariotipificación , Masculino , Mutagénesis Insercional/genética
14.
Am J Hum Genet ; 97(5): 754-60, 2015 Nov 05.
Artículo en Inglés | MEDLINE | ID: mdl-26593267

RESUMEN

Autosomal-recessive optic neuropathies are rare blinding conditions related to retinal ganglion cell (RGC) and optic-nerve degeneration, for which only mutations in TMEM126A and ACO2 are known. In four families with early-onset recessive optic neuropathy, we identified mutations in RTN4IP1, which encodes a mitochondrial ubiquinol oxydo-reductase. RTN4IP1 is a partner of RTN4 (also known as NOGO), and its ortholog Rad8 in C. elegans is involved in UV light response. Analysis of fibroblasts from affected individuals with a RTN4IP1 mutation showed loss of the altered protein, a deficit of mitochondrial respiratory complex I and IV activities, and increased susceptibility to UV light. Silencing of RTN4IP1 altered the number and morphogenesis of mouse RGC dendrites in vitro and the eye size, neuro-retinal development, and swimming behavior in zebrafish in vivo. Altogether, these data point to a pathophysiological mechanism responsible for RGC early degeneration and optic neuropathy and linking RTN4IP1 functions to mitochondrial physiology, response to UV light, and dendrite growth during eye maturation.


Asunto(s)
Proteínas Portadoras/genética , Fibroblastos/patología , Mitocondrias/patología , Proteínas Mitocondriales/genética , Mutación/genética , Enfermedades del Nervio Óptico/genética , Enfermedades del Nervio Óptico/patología , Células Ganglionares de la Retina/patología , Secuencia de Aminoácidos , Animales , Proteínas Portadoras/antagonistas & inhibidores , Proteínas Portadoras/metabolismo , Estudios de Casos y Controles , Células Cultivadas , Complejo I de Transporte de Electrón , Femenino , Fibroblastos/metabolismo , Estudios de Seguimiento , Genes Recesivos , Humanos , Masculino , Ratones , Mitocondrias/genética , Proteínas Mitocondriales/antagonistas & inhibidores , Proteínas Mitocondriales/metabolismo , Datos de Secuencia Molecular , Degeneración Nerviosa , Linaje , Pronóstico , Células Ganglionares de la Retina/metabolismo , Homología de Secuencia de Aminoácido , Pez Cebra/genética , Pez Cebra/crecimiento & desarrollo , Pez Cebra/metabolismo
15.
J Stroke Cerebrovasc Dis ; 27(7): 1837-1843, 2018 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-29555401

RESUMEN

BACKGROUND: The number of deaths from hemorrhagic strokes is about twice as high than the number of deaths from ischemic strokes. Genetic risk assessment could play important roles in preventive and therapeutic strategies. The present study was aimed to evaluate whether the MTHFR gene polymorphisms could increase the risk of cerebral hemorrhage in Moroccan patients. METHODS: A total of 113 patients with hemorrhagic stroke and 323 healthy controls were included in this case-control study. The C677T (rs1801133) and A1298C (rs1801131) MTHFR gene polymorphisms were genotyped by Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) method in all patients and controls. The genotype and allele frequencies were compared between groups using appropriate statistical analyses. RESULTS: Both groups, patients and controls, were in accordance with the Hardy-Weinberg Equilibrium. For the C677T polymorphism, the frequencies of the CC, CT, and TT genotypes were 50.44% versus 46.13%, 39.82% versus 43.03, and 9.73% versus 10.84% in controls versus patients, respectively, whereas for the A1298C polymorphism, the frequencies of the AA, AC, and CC genotypes were 56.64% versus 57.59%, 40.71% versus 37.15, and 2.65% versus 5.26% in controls versus patients, respectively. No statistically significant difference has been proved between patients and controls frequencies (P >.05) for all additive, recessive, and dominant models. Additional analyses including genotypes combination, allelic frequencies, and hemorrhagic stroke patient subtypes did not show any statistically significant difference between controls and patients/subgroup patients. CONCLUSIONS: Our findings suggested no association between MTHFR gene polymorphisms and susceptibility to hemorrhagic strokes in Moroccan patients. Further investigations should be conducted to elucidate the roles of other gene variants in the pathogenesis of this condition.


Asunto(s)
Hemorragias Intracraneales/genética , Metilenotetrahidrofolato Reductasa (NADPH2)/genética , Polimorfismo de Nucleótido Simple , Accidente Cerebrovascular/genética , Adulto , Estudios de Casos y Controles , Femenino , Frecuencia de los Genes , Estudios de Asociación Genética , Humanos , Masculino , Persona de Mediana Edad , Marruecos
16.
Mol Biol Rep ; 44(5): 429-434, 2017 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-28951997

RESUMEN

In the present work, we identified two novel compound heterozygote mutations in the GPR98 (G protein-coupled receptor 98) gene causing Usher syndrome. Whole-exome sequencing was performed to study the genetic causes of Usher syndrome in a Moroccan family with three affected siblings. We identify two novel compound heterozygote mutations (c.1054C > A, c.16544delT) in the GPR98 gene in the three affected siblings carrying post-linguale bilateral moderate hearing loss with normal vestibular functions and before installing visual disturbances. This is the first time that mutations in the GPR98 gene are described in the Moroccan deaf patients.


Asunto(s)
Receptores Acoplados a Proteínas G/genética , Receptores Acoplados a Proteínas G/metabolismo , Síndromes de Usher/genética , Adolescente , Adulto , Niño , Femenino , Heterocigoto , Humanos , Masculino , Marruecos , Mutación/genética , Linaje , Hermanos , Secuenciación del Exoma/métodos
17.
J Clin Immunol ; 36(3): 187-94, 2016 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-26931785

RESUMEN

PURPOSE: X-linked agammagobulinemia (XLA) is a primary immunodeficiency caused by Bruton's tyrosine kinase (BTK) gene defect. XLA patients have absent or reduced number of peripheral B cells and a profound deficiency in all immunoglobulin isotypes. This multicenter study reports the clinical, immunological and molecular features of Bruton's disease in 40 North African male patients. METHODS: Fifty male out of 63 (male and female) patients diagnosed with serum agammaglobulinemia and non detectable to less than 2% peripheral B cells were enrolled. The search for BTK gene mutations was performed for all of them by genomic DNA amplification and Sanger sequencing. RESULTS: We identified 33 different mutations in the BTK gene in 40 patients including 12 missense mutations, 6 nonsense mutations, 6 splice-site mutations, 5 frameshift, 2 large deletions, one complex mutation and one in-frame deletion. Seventeen of these mutations are novel. This large series shows a lower frequency of XLA among male patients from North Africa with agammaglobulinemia and absent to low B cells compared with other international studies (63.5% vs. 85%). No strong evidence for genotype-phenotype correlation was observed. CONCLUSIONS: This study adds to other reports from highly consanguineous North African populations, showing lower frequency of X-linked forms as compared to AR forms of the same primary immunodeficiency. Furthermore, a large number of novel BTK mutations were identified and could further help identify carriers for genetic counseling.


Asunto(s)
Agammaglobulinemia/genética , Expresión Génica , Frecuencia de los Genes , Enfermedades Genéticas Ligadas al Cromosoma X/genética , Mutación , Infecciones Oportunistas/genética , Proteínas Tirosina Quinasas/genética , Adulto , Agammaglobulinemia Tirosina Quinasa , Agammaglobulinemia/complicaciones , Agammaglobulinemia/diagnóstico , Agammaglobulinemia/inmunología , Edad de Inicio , Argelia , Alelos , Linfocitos B/inmunología , Linfocitos B/patología , Niño , Preescolar , Estudios de Asociación Genética , Asesoramiento Genético , Enfermedades Genéticas Ligadas al Cromosoma X/complicaciones , Enfermedades Genéticas Ligadas al Cromosoma X/diagnóstico , Enfermedades Genéticas Ligadas al Cromosoma X/inmunología , Heterocigoto , Humanos , Lactante , Masculino , Marruecos , Infecciones Oportunistas/complicaciones , Infecciones Oportunistas/diagnóstico , Infecciones Oportunistas/inmunología , Proteínas Tirosina Quinasas/inmunología , Análisis de Secuencia de ADN , Túnez
18.
Hum Mutat ; 36(11): E2441-53, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26173767

RESUMEN

The Mediterranean basin has been the theater of migration crossroads followed by settlement of several societies and cultures in prehistoric and historical times, with important consequences on genetic and genomic determinisms. Here, we present the Mediterranean Founder Mutation Database (MFMD), established to offer web-based access to founder mutation information in the Mediterranean population. Mutation data were collected from the literature and other online resources and systematically reviewed and assembled into this database. The information provided for each founder mutation includes DNA change, amino-acid change, mutation type and mutation effect, as well as mutation frequency and coalescence time when available. Currently, the database contains 383 founder mutations found in 210 genes related to 219 diseases. We believe that MFMD will help scientists and physicians to design more rapid and less expensive genetic diagnostic tests. Moreover, the coalescence time of founder mutations gives an overview about the migration history of the Mediterranean population. MFMD can be publicly accessed from http://mfmd.pasteur.ma.


Asunto(s)
Bases de Datos Genéticas , Emigración e Inmigración , Efecto Fundador , Variación Genética , Genética de Población , Mutación , Bases de Datos Factuales , Estudios de Asociación Genética , Predisposición Genética a la Enfermedad , Pruebas Genéticas , Humanos , Región Mediterránea , Navegador Web
19.
Am J Hum Genet ; 91(5): 919-27, 2012 Nov 02.
Artículo en Inglés | MEDLINE | ID: mdl-23084290

RESUMEN

A subset of nuclear-encoded RNAs has to be imported into mitochondria for the proper replication and transcription of the mitochondrial genome and, hence, for proper mitochondrial function. Polynucleotide phosphorylase (PNPase or PNPT1) is one of the very few components known to be involved in this poorly characterized process in mammals. At the organismal level, however, the effect of PNPase dysfunction and impaired mitochondrial RNA import are unknown. By positional cloning, we identified a homozygous PNPT1 missense mutation (c.1424A>G predicting the protein substitution p.Glu475Gly) of a highly conserved PNPase residue within the second RNase-PH domain in a family affected by autosomal-recessive nonsyndromic hearing impairment. In vitro analyses in bacteria, yeast, and mammalian cells showed that the identified mutation results in a hypofunctional protein leading to disturbed PNPase trimerization and impaired mitochondrial RNA import. Immunohistochemistry revealed strong PNPase staining in the murine cochlea, including the sensory hair cells and the auditory ganglion neurons. In summary, we show that a component of the mitochondrial RNA-import machinery is specifically required for auditory function.


Asunto(s)
Exorribonucleasas/genética , Pérdida Auditiva Sensorineural/genética , Mutación , Transporte de ARN/genética , ARN/metabolismo , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Línea Celular , Mapeo Cromosómico , Cóclea/metabolismo , Cóclea/patología , Consanguinidad , Exones , Exorribonucleasas/química , Exorribonucleasas/metabolismo , Femenino , Expresión Génica , Pérdida Auditiva Sensorineural/metabolismo , Humanos , Masculino , Ratones , Modelos Moleculares , Datos de Secuencia Molecular , Linaje , Conformación Proteica , ARN Mitocondrial , Pez Cebra/genética , Pez Cebra/metabolismo
20.
BMC Cancer ; 15: 81, 2015 Feb 25.
Artículo en Inglés | MEDLINE | ID: mdl-25885115

RESUMEN

BACKGROUND: Identification of specific mutations in cancer patients may lead to the discovery of genes, which can affect susceptibility and/or prognosis. It has previously been reported that mutations in BRCA1 and BRCA2 genes are linked to breast cancer. Here, we evaluated the use of the High Resolution Melting (HRM) approach to screen for mutations in exon 11 of BRCA1 gene in Moroccan patients. METHODS: HRM analysis was used to screen exon 11 from 71 breast cancer patients in order to detect different variants. Conventional Sanger sequencing was used to confirm the presence of possible mutations. Distribution of different SNPs was determined by SNaPshot analysis software. RESULTS: In order to assess the efficacy of the HRM approach to screen for mutations, especially in diagnosis, we first used two samples with previously known mutations, "2924delA and 3398delC". Indeed, these previously known sequence variants were detected by the HRM approach and yielded melting curves with atypical shape relative to wild-type control sequences. We then analyzed, 69 samples from breast cancer patients using the HRM method, and were able to detect two samples with atypical curves. Sequencing of the two samples, using the conventional Sanger approach, confirmed the presence of the same SNP (c.2612C > T) in both samples. CONCLUSIONS: Our results strongly suggest that the HRM approach represents a reliable and highly sensitive method for mutation scanning, especially in diagnosis.


Asunto(s)
Proteína BRCA1/genética , Neoplasias de la Mama/diagnóstico , Análisis Mutacional de ADN/métodos , Detección Precoz del Cáncer/métodos , Neoplasias de la Mama/genética , Exones , Femenino , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Humanos , Marruecos , Mutación , Polimorfismo de Nucleótido Simple , Sensibilidad y Especificidad
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