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Int J Food Microbiol ; 74(3): 217-27, 2002 Apr 05.
Artículo en Inglés | MEDLINE | ID: mdl-11981972

RESUMEN

Felix 01 (F01) is a bacteriophage originally isolated by Felix and Callow which lyses almost all Salmonella strains and has been widely used as a diagnostic test for this genus. Molecular information about this phage is entirely lacking. In the present study, the DNA of the phage was found to be a double-stranded linear molecule of about 80 kb. 11.5 kb has been sequenced and in this region A + T content is 60%. There are relatively few restriction endonuclease cleavage sites in the native genome and clones show this is due to their absence rather than modification. A restriction map of the genome has been constructed. The ends of the molecule cannot be ligated although they contain 5' phosphates. At least 60% of the genome must encode proteins. In the sequenced portion, many open reading frames exist and these are tightly packed together. These have been examined for homology to published proteins but only 1 to 17 shows similarity to known proteins. F01 is therefore the prototype of a new phage family. On the basis of restriction sites, codon usage and the distribution of nonsense codons in the unused reading frames, a strong case can be made for natural selection that reacts to mRNA structure and function.


Asunto(s)
ADN Viral , Fagos de Salmonella/genética , Secuencia de Bases , Codón , ADN Viral/química , ADN Viral/genética , ADN Viral/metabolismo , Genes Virales , Genoma Viral , Sistemas de Lectura Abierta , Mapeo Restrictivo , Salmonella/virología , Fagos de Salmonella/crecimiento & desarrollo , Fagos de Salmonella/patogenicidad , Proteínas Virales/biosíntesis , Proteínas Virales/química , Proteínas Virales/genética , Virulencia
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