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1.
Proc Natl Acad Sci U S A ; 116(21): 10424-10429, 2019 05 21.
Artículo en Inglés | MEDLINE | ID: mdl-31064874

RESUMEN

Insecticide resistance is a paradigm of microevolution, and insecticides are responsible for the strongest cases of recent selection in the genome of Drosophila melanogaster Here we use a naïve population and a novel insecticide class to examine the ab initio genetic architecture of a potential selective response. Genome-wide association studies (GWAS) of chlorantraniliprole susceptibility reveal variation in a gene of major effect, Stretchin Myosin light chain kinase (Strn-Mlck), which we validate with linkage mapping and transgenic manipulation of gene expression. We propose that allelic variation in Strn-Mlck alters sensitivity to the calcium depletion attributable to chlorantraniliprole's mode of action. GWAS also reveal a network of genes involved in neuromuscular biology. In contrast, phenotype to transcriptome associations identify differences in constitutive levels of multiple transcripts regulated by cnc, the homolog of mammalian Nrf2. This suggests that genetic variation acts in trans to regulate multiple metabolic enzymes in this pathway. The most outstanding association is with the transcription level of Cyp12d1 which is also affected in cis by copy number variation. Transgenic overexpression of Cyp12d1 reduces susceptibility to both chlorantraniliprole and the closely related insecticide cyantraniliprole. This systems genetics study reveals multiple allelic variants segregating at intermediate frequency in a population that is completely naïve to this new insecticide chemistry and it foreshadows a selective response among natural populations to these chemicals.


Asunto(s)
Variaciones en el Número de Copia de ADN/genética , Drosophila melanogaster/efectos de los fármacos , Drosophila melanogaster/genética , Resistencia a los Insecticidas/genética , Insecticidas/farmacología , Transactivadores/genética , Alelos , Animales , Animales Modificados Genéticamente , Mapeo Cromosómico/métodos , Variaciones en el Número de Copia de ADN/efectos de los fármacos , Proteínas de Drosophila/genética , Estudio de Asociación del Genoma Completo/métodos , Quinasa de Cadena Ligera de Miosina/genética , Fenotipo , Pirazoles/farmacología , Supervivencia , Transcriptoma/efectos de los fármacos , Transcriptoma/genética , ortoaminobenzoatos/farmacología
2.
Proc Natl Acad Sci U S A ; 110(36): 14705-10, 2013 Sep 03.
Artículo en Inglés | MEDLINE | ID: mdl-23959864

RESUMEN

The Resistance to Dieldrin gene, Rdl, encodes a GABA-gated chloride channel subunit that is targeted by cyclodiene and phenylpyrazole insecticides. The gene was first characterized in Drosophila melanogaster by genetic mapping of resistance to the cyclodiene dieldrin. The 4,000-fold resistance observed was due to a single amino acid replacement, Ala(301) to Ser. The equivalent change was subsequently identified in Rdl orthologs of a large range of resistant insect species. Here, we report identification of a duplication at the Rdl locus in D. melanogaster. The 113-kb duplication contains one WT copy of Rdl and a second copy with two point mutations: an Ala(301) to Ser resistance mutation and Met(360) to Ile replacement. Individuals with this duplication exhibit intermediate dieldrin resistance compared with single copy Ser(301) homozygotes, reduced temperature sensitivity, and altered RNA editing associated with the resistant allele. Ectopic recombination between Roo transposable elements is involved in generating this genomic rearrangement. The duplication phenotypes were confirmed by construction of a transgenic, artificial duplication integrating the 55.7-kb Rdl locus with a Ser(301) change into an Ala(301) background. Gene duplications can contribute significantly to the evolution of insecticide resistance, most commonly by increasing the amount of gene product produced. Here however, duplication of the Rdl target site creates permanent heterozygosity, providing unique potential for adaptive mutations to accrue in one copy, without abolishing the endogenous role of an essential gene.


Asunto(s)
Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Duplicación de Gen , Resistencia a los Insecticidas/genética , Receptores de GABA-A/genética , Secuencia de Aminoácidos , Animales , Sitios de Unión/genética , Variaciones en el Número de Copia de ADN , Elementos Transponibles de ADN/genética , Dieldrín/toxicidad , Drosophila melanogaster/efectos de los fármacos , Femenino , Expresión Génica , Genes Esenciales/genética , Insecticidas/toxicidad , Dosificación Letal Mediana , Masculino , Modelos Genéticos , Datos de Secuencia Molecular , Tasa de Mutación , Mutación Puntual , Homología de Secuencia de Aminoácido , Temperatura
3.
Mol Biol Rep ; 40(1): 35-42, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23114913

RESUMEN

A suite of polymorphic microsatellite markers and the complete mitochondrial genome sequence was developed by next generation sequencing (NGS) for the critically endangered orange-bellied parrot, Neophema chrysogaster. A total of 14 polymorphic loci were identified and characterized using DNA extractions representing 40 individuals from Melaleuca, Tasmania, sampled in 2002. We observed moderate genetic variation across most loci (mean number of alleles per locus = 2.79; mean expected heterozygosity = 0.53) with no evidence of individual loci deviating significantly from Hardy-Weinberg equilibrium. Marker independence was confirmed with tests for linkage disequilibrium, and analyses indicated no evidence of null alleles across loci. De novo and reference-based genome assemblies performed using MIRA were used to assemble the N. chrysogaster mitochondrial genome sequence with mean coverage of 116-fold (range 89 to 142-fold). The mitochondrial genome consists of 18,034 base pairs, and a typical metazoan mitochondrial gene content consisting of 13 protein-coding genes, 2 ribosomal subunit genes, 22 transfer RNAs, and a single large non-coding region (control region). The arrangement of mitochondrial genes is also typical of Avian taxa. The annotation of the mitochondrial genome and the characterization of 14 microsatellite markers provide a valuable resource for future genetic monitoring of wild and captive N. chrysogaster populations. As found previously, NGS provides a rapid, low cost and reliable method for polymorphic nuclear genetic marker development and determining complete mitochondrial genome sequences when only a fraction of a genome is sequenced.


Asunto(s)
ADN Mitocondrial/química , Especies en Peligro de Extinción , Repeticiones de Microsatélite , Loros/genética , Animales , Orden Génico , Genoma Mitocondrial , Secuenciación de Nucleótidos de Alto Rendimiento , Datos de Secuencia Molecular , Sistemas de Lectura Abierta , ARN Ribosómico , ARN de Transferencia
4.
PLoS Genet ; 6(6): e1000998, 2010 Jun 24.
Artículo en Inglés | MEDLINE | ID: mdl-20585622

RESUMEN

The increased transcription of the Cyp6g1 gene of Drosophila melanogaster, and consequent resistance to insecticides such as DDT, is a widely cited example of adaptation mediated by cis-regulatory change. A fragment of an Accord transposable element inserted upstream of the Cyp6g1 gene is causally associated with resistance and has spread to high frequencies in populations around the world since the 1940s. Here we report the existence of a natural allelic series at this locus of D. melanogaster, involving copy number variation of Cyp6g1, and two additional transposable element insertions (a P and an HMS-Beagle). We provide evidence that this genetic variation underpins phenotypic variation, as the more derived the allele, the greater the level of DDT resistance. Tracking the spatial and temporal patterns of allele frequency changes indicates that the multiple steps of the allelic series are adaptive. Further, a DDT association study shows that the most resistant allele, Cyp6g1-[BP], is greatly enriched in the top 5% of the phenotypic distribution and accounts for approximately 16% of the underlying phenotypic variation in resistance to DDT. In contrast, copy number variation for another candidate resistance gene, Cyp12d1, is not associated with resistance. Thus the Cyp6g1 locus is a major contributor to DDT resistance in field populations, and evolution at this locus features multiple adaptive steps occurring in rapid succession.


Asunto(s)
Sistema Enzimático del Citocromo P-450/genética , Variaciones en el Número de Copia de ADN , Elementos Transponibles de ADN , Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Adaptación Biológica , Alelos , Animales , Animales Modificados Genéticamente , Sitios Genéticos , Transcripción Genética
5.
Mol Biol Evol ; 28(8): 2393-402, 2011 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-21393605

RESUMEN

Latitudinal body size clines in animals conforming to Bergmann's rule occur on many continents but isolating their underlying genetic basis remains a challenge. In Drosophila melanogaster, the gene Dca accounts for approximately 5-10% of the natural wing size variation (McKechnie SW, Blacket MJ, Song SV, Rako L, Carroll X, Johnson TK, Jensen LT, Lee SF, Wee CW, Hoffmann AA. 2010. A clinally varying promoter polymorphism associated with adaptive variation in wing size in Drosophila. Mol Ecol. 19:775-784). We present here functional evidence that Dca is a negative regulator of wing size. A significant negative latitudinal cline of Dca gene expression was detected in synchronized third instar larvae. In addition, we clarified the evolutionary history of the three most common Dca promoter alleles (Dca237-1, Dca237-2, and Dca247) and showed that the insertion allele (Dca247), whose frequency increases with latitude, is associated with larger wing centroid size and higher average cell number in male flies. Finally, we showed that the overall linkage disequilibrium (LD) was low in the Dca promoter and that the insertion/deletion polymorphism that defines the Dca alleles was in strong LD with two other upstream sites. Our results provide strong support that Dca is a candidate for climatic adaptation in D. melanogaster.


Asunto(s)
Adaptación Biológica/genética , Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Drosophila melanogaster/metabolismo , Genes de Insecto/genética , Animales , Animales Modificados Genéticamente , Tamaño Corporal/genética , Drosophila melanogaster/anatomía & histología , Evolución Molecular , Femenino , Expresión Génica/genética , Regulación de la Expresión Génica , Técnicas de Silenciamiento del Gen , Desequilibrio de Ligamiento/genética , Masculino , Datos de Secuencia Molecular , Mutación/genética , Fenotipo , Polimorfismo Genético , Regiones Promotoras Genéticas/genética , Análisis de Secuencia de ADN , Alas de Animales
6.
BMC Genomics ; 12: 406, 2011 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-21827708

RESUMEN

BACKGROUND: The Australian sheep blowfly Lucilia cuprina (Wiedemann) (Diptera: Calliphoridae) is a destructive pest of the sheep, a model organism for insecticide resistance research, and a valuable tool for medical and forensic professionals. However, genomic information on L. cuprina is still sparse. RESULTS: We report here the construction of an embryonic and 2 larval cDNA libraries for L. cuprina. A total of 29,816 expressed sequence tags (ESTs) were obtained and assembled into 7,464 unique clusters. The sequence collection captures a great diversity of genes, including those related to insecticide resistance (e.g., 12 cytochrome P450s, 2 glutathione S transferases, and 6 esterases). Compared to Drosophila melanogaster, codon preference is different in 13 of the 18 amino acids encoded by redundant codons, reflecting the lower overall GC content in L. cuprina. In addition, we demonstrated that the ESTs could be converted into informative gene markers by capitalizing on the known gene structures in the model organism D. melanogaster. We successfully assigned 41 genes to their respective chromosomes in L. cuprina. The relative locations of these loci revealed high but incomplete chromosomal synteny between L. cuprina and D. melanogaster. CONCLUSIONS: Our results represent the first major transcriptomic undertaking in L. cuprina. These new genetic resources could be useful for the blowfly and insect research community.


Asunto(s)
Mapeo Cromosómico , Dípteros/genética , Etiquetas de Secuencia Expresada , Genoma de los Insectos , Animales , Composición de Base , Análisis por Conglomerados , Codón/genética , Drosophila melanogaster/genética , Biblioteca de Genes , Genes de Insecto , Larva/genética , Sintenía , Transcriptoma
7.
J Cell Biol ; 162(2): 317-27, 2003 Jul 21.
Artículo en Inglés | MEDLINE | ID: mdl-12876279

RESUMEN

The invasion of host cells by the malaria parasite Plasmodium falciparum requires specific protein-protein interactions between parasite and host receptors and an intracellular translocation machinery to power the process. The transmembrane erythrocyte binding protein-175 (EBA-175) and thrombospondin-related anonymous protein (TRAP) play central roles in this process. EBA-175 binds to glycophorin A on human erythrocytes during the invasion process, linking the parasite to the surface of the host cell. In this report, we show that the cytoplasmic domain of EBA-175 encodes crucial information for its role in merozoite invasion, and that trafficking of this protein is independent of this domain. Further, we show that the cytoplasmic domain of TRAP, a protein that is not expressed in merozoites but is essential for invasion of liver cells by the sporozoite stage, can substitute for the cytoplasmic domain of EBA-175. These results show that the parasite uses the same components of its cellular machinery for invasion regardless of the host cell type and invasive form.


Asunto(s)
Antígenos de Protozoos/metabolismo , Proteínas Portadoras/metabolismo , Citoplasma/química , Plasmodium falciparum/metabolismo , Plasmodium falciparum/patogenicidad , Transporte de Proteínas , Proteínas Protozoarias/metabolismo , Secuencia de Aminoácidos , Aminoácidos Acídicos/química , Animales , Animales Modificados Genéticamente , Antígenos de Protozoos/genética , Proteínas Portadoras/química , Proteínas Portadoras/genética , Proteínas Portadoras/inmunología , Secuencia Conservada , Citoplasma/parasitología , Eritrocitos/metabolismo , Eritrocitos/parasitología , Glicoforinas/metabolismo , Humanos , Modelos Biológicos , Datos de Secuencia Molecular , Mutación , Plasmodium falciparum/genética , Plasmodium falciparum/inmunología , Proteínas Protozoarias/química , Proteínas Protozoarias/genética , Proteínas Protozoarias/inmunología , Proteínas Recombinantes/metabolismo , Tirosina/química
8.
Nat Ecol Evol ; 3(4): 647-656, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30886368

RESUMEN

Imidacloprid, the world's most used insecticide, has caused considerable controversy due to harmful effects on non-pest species and increasing evidence showing that insecticides have become the primary selective force in many insect species. The genetic response to insecticides is heterogeneous across populations and environments, leading to more complex patterns of genetic variation than previously thought. This motivated the investigation of imidacloprid resistance at different temperatures in natural populations of Drosophila melanogaster originating from four climate extremes replicated across two continents. Population and quantitative genomic analysis, supported by functional tests, have revealed a mixed genetic architecture to resistance involving major genes (Paramyosin and Nicotinic-Acetylcholine Receptor Alpha 3) and polygenes with a major trade-off with thermotolerance. Reduced genetic differentiation at resistance-associated loci indicated enhanced gene flow at these loci. Resistance alleles showed stronger evidence of positive selection in temperate populations compared to tropical populations in which chromosomal inversions In(2 L)t, In(3 R)Mo and In(3 R)Payne harbour susceptibility alleles. Polygenic architecture and ecological factors should be considered when developing sustainable management strategies for both pest and beneficial insects.


Asunto(s)
Drosophila melanogaster/fisiología , Resistencia a los Insecticidas/fisiología , Insecticidas , Neonicotinoides , Nitrocompuestos , Termotolerancia , Animales , Clima , Femenino , Estudio de Asociación del Genoma Completo , Receptores Nicotínicos/genética , Tropomiosina/genética
9.
Infect Immun ; 75(12): 5565-74, 2007 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-17893128

RESUMEN

Serine repeat antigens (SERAs) are a family of secreted "cysteine-like" proteases of Plasmodium parasites. Several SERAs possess an atypical active-site serine residue in place of the canonical cysteine. The human malaria parasite Plasmodium falciparum possesses six "serine-type" (SERA1 to SERA5 and SERA9) and three "cysteine-type" (SERA6 to SERA8) SERAs. Here, we investigate the importance of the serine-type SERAs to blood-stage parasite development and examine the extent of functional redundancy among this group. We attempted to knock out the four P. falciparum serine-type SERA genes that have not been disrupted previously. SERA1, SERA4, and SERA9 knockout lines were generated, while only SERA5, the most strongly expressed member of the SERA family, remained refractory to genetic deletion. Interestingly, we discovered that while SERA4-null parasites completed the blood-stage cycle normally, they exhibited a twofold increase in the level of SERA5 mRNA. The inability to disrupt SERA5 and the apparent compensatory increase in SERA5 expression in response to the deletion of SERA4 provides evidence for an important blood-stage function for the serine-type SERAs and supports the notion of functional redundancy among this group. Such redundancy is consistent with our phylogenetic analysis, which reveals a monophyletic grouping of the serine-type SERAs across the genus Plasmodium and a predominance of postspeciation expansion. While SERA5 is to some extent further validated as a target for vaccine and drug development, our data suggest that the expression level of other serine-type SERAs is the only barrier to escape from anti-SERA5-specific interventions.


Asunto(s)
Antígenos de Protozoos/inmunología , Vacunas contra la Malaria/inmunología , Plasmodium falciparum/inmunología , Serina Endopeptidasas/inmunología , Animales , Antígenos de Protozoos/genética , Antimaláricos/química , Antimaláricos/farmacología , Apicomplexa/genética , Intercambio Genético , ADN Recombinante/genética , Diseño de Fármacos , Eritrocitos/parasitología , Eliminación de Gen , Humanos , Vacunas contra la Malaria/genética , Malaria Falciparum/tratamiento farmacológico , Malaria Falciparum/prevención & control , Filogenia , Plasmodium falciparum/enzimología , Plasmodium falciparum/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/métodos , Serina Endopeptidasas/metabolismo , Inhibidores de Serina Proteinasa/metabolismo , Transfección , Regulación hacia Arriba
10.
Genetics ; 207(3): 1181-1193, 2017 11.
Artículo en Inglés | MEDLINE | ID: mdl-28935691

RESUMEN

Insecticide resistance is considered a classic model of microevolution, where a strong selective agent is applied to a large natural population, resulting in a change in frequency of alleles that confer resistance. While many insecticide resistance variants have been characterized at the gene level, they are typically single genes of large effect identified in highly resistant pest species. In contrast, multiple variants have been implicated in DDT resistance in Drosophila melanogaster; however, only the Cyp6g1 locus has previously been shown to be relevant to field populations. Here we use genome-wide association studies (GWAS) to identify DDT-associated polygenes and use selective sweep analyses to assess their adaptive significance. We identify and verify two candidate DDT resistance loci. A largely uncharacterized gene, CG10737, has a function in muscles that ameliorates the effects of DDT, while a putative detoxifying P450, Cyp6w1, shows compelling evidence of positive selection.


Asunto(s)
DDT/toxicidad , Drosophila melanogaster/genética , Sitios Genéticos , Resistencia a los Insecticidas/genética , Plaguicidas/toxicidad , Animales , Sistema Enzimático del Citocromo P-450/genética , Proteínas de Drosophila/genética , Drosophila melanogaster/efectos de los fármacos , Genoma de los Insectos , Selección Genética
11.
Mol Biochem Parasitol ; 137(1): 13-21, 2004 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-15279947

RESUMEN

The apicoplast and mitochondrion of the malaria parasite Plasmodium falciparum are important intracellular organelles and targets of several anti-malarial drugs. In recent years, our group and others have begun to piece together the metabolic pathways of these organelles, with a view to understanding their functions and identifying further anti-malarial targets. This has involved localization of putative organellar proteins using fluorescent reporter proteins such as green fluorescent protein (GFP). A major limitation to such an approach is the difficulties associated with using existing plasmids to genetically modify P. falciparum. In this paper, we present a novel series of P. falciparum transfection vectors based around the Gateway recombinatorial cloning system. Our system makes it considerably easier to construct fluorescent reporter fusion proteins, as well as allowing the use of two selectable markers. Using this approach, we localize proteins involved in isoprenoid biosynthesis and the posttranslational processing of apicoplast-encoded proteins to the apicoplast, and a protein putatively involved in the citric acid cycle to the mitochondrion. To confirm the localization of these proteins, we have developed a new immunofluorescence assay (IFA) protocol using antibodies specific to the apicoplast and mitochondrion. In comparison with published IFA methods, we find that ours maintains considerably better structural preservation, while still allowing sufficient antibody binding as well as preserving reporter protein fluorescence. In summary, we present two important new tools that have enabled us to characterize some of the functions of the apicoplast and mitochondrion, and which will be of use to the wider malaria research community in elucidating the localization of other P. falciparum proteins.


Asunto(s)
Técnica del Anticuerpo Fluorescente/métodos , Vectores Genéticos , Mitocondrias/química , Orgánulos/química , Plasmodium falciparum/química , Proteínas Protozoarias/análisis , Animales , Fusión Artificial Génica , Ciclo del Ácido Cítrico , Clonación Molecular/métodos , Genes Reporteros , Orgánulos/enzimología , Plasmodium falciparum/enzimología , Plasmodium falciparum/genética , Procesamiento Proteico-Postraduccional , Transporte de Proteínas , Proteínas Recombinantes de Fusión , Selección Genética , Terpenos/metabolismo , Transfección
12.
Genome Biol Evol ; 6(5): 1118-34, 2014 Apr 20.
Artículo en Inglés | MEDLINE | ID: mdl-24751979

RESUMEN

We map 114 gene gains and 74 gene losses in the P450 gene family across the phylogeny of 12 Drosophila species by examining the congruence of gene trees and species trees. Although the number of P450 genes varies from 74 to 94 in the species examined, we infer that there were at least 77 P450 genes in the ancestral Drosophila genome. One of the most striking observations in the data set is the elevated loss of P450 genes in the Drosophila sechellia lineage. The gain and loss events are not evenly distributed among the P450 genes-with 30 genes showing no gene gains or losses whereas others show as many as 20 copy number changes among the species examined. The P450 gene clades showing the fewest number of gene gain and loss events tend to be those evolving with the most purifying selection acting on the protein sequences, although there are exceptions, such as the rapid rate of amino acid replacement observed in the single copy phantom (Cyp306a1) gene. Within D. melanogaster, we observe gene copy number polymorphism in ten P450 genes including multiple cases of interparalog chimeras. Nonallelic homologous recombination (NAHR) has been associated with deleterious mutations in humans, but here we provide a second possible example of an NAHR event in insect P450s being adaptive. Specifically, we find that a polymorphic Cyp12a4/Cyp12a5 chimera correlates with resistance to an insecticide. Although we observe such interparalog exchange in our within-species data sets, we have little evidence of it between species, raising the possibility that such events may occur more frequently than appreciated but are masked by subsequent sequence change.


Asunto(s)
Sistema Enzimático del Citocromo P-450/genética , Proteínas de Drosophila/genética , Drosophila/genética , Evolución Molecular , Adaptación Fisiológica/genética , Sustitución de Aminoácidos , Animales , Secuencia de Bases , Eliminación de Gen , Dosificación de Gen , Genoma de los Insectos , Recombinación Homóloga , Modelos Genéticos , Datos de Secuencia Molecular , Familia de Multigenes , Filogenia , Polimorfismo Genético
13.
PLoS One ; 9(1): e84879, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24416303

RESUMEN

Widespread use of insecticides has led to insecticide resistance in many populations of insects. In some populations, resistance has evolved to multiple pesticides. In Drosophila melanogaster, resistance to multiple classes of insecticide is due to the overexpression of a single cytochrome P450 gene, Cyp6g1. Overexpression of Cyp6g1 appears to have evolved in parallel in Drosophila simulans, a sibling species of D. melanogaster, where it is also associated with insecticide resistance. However, it is not known whether the ability of the CYP6G1 enzyme to provide resistance to multiple insecticides evolved recently in D. melanogaster or if this function is present in all Drosophila species. Here we show that duplication of the Cyp6g1 gene occurred at least four times during the evolution of different Drosophila species, and the ability of CYP6G1 to confer resistance to multiple insecticides exists in D. melanogaster and D. simulans but not in Drosophila willistoni or Drosophila virilis. In D. virilis, which has multiple copies of Cyp6g1, one copy confers resistance to DDT and another to nitenpyram, suggesting that the divergence of protein sequence between copies subsequent to the duplication affected the activity of the enzyme. All orthologs tested conferred resistance to one or more insecticides, suggesting that CYP6G1 had the capacity to provide resistance to anthropogenic chemicals before they existed. Finally, we show that expression of Cyp6g1 in the Malpighian tubules, which contributes to DDT resistance in D. melanogaster, is specific to the D. melanogaster-D. simulans lineage. Our results suggest that a combination of gene duplication, regulatory changes and protein coding changes has taken place at the Cyp6g1 locus during evolution and this locus may play a role in providing resistance to different environmental toxins in different Drosophila species.


Asunto(s)
Sistema Enzimático del Citocromo P-450/genética , Variaciones en el Número de Copia de ADN/genética , Proteínas de Drosophila/genética , Drosophila melanogaster/enzimología , Evolución Molecular , Regulación Enzimológica de la Expresión Génica/genética , Sitios Genéticos/genética , Resistencia a los Insecticidas/genética , Animales , Variaciones en el Número de Copia de ADN/efectos de los fármacos , Drosophila melanogaster/efectos de los fármacos , Drosophila melanogaster/genética , Drosophila melanogaster/fisiología , Duplicación de Gen/efectos de los fármacos , Duplicación de Gen/genética , Regulación Enzimológica de la Expresión Génica/efectos de los fármacos , Sitios Genéticos/efectos de los fármacos , Sistemas de Lectura Abierta/efectos de los fármacos , Sistemas de Lectura Abierta/genética , Especificidad de Órganos , Fenotipo , Especificidad de la Especie
14.
PLoS Pathog ; 1(4): e37, 2005 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-16362075

RESUMEN

Central to the pathology of malaria disease are the repeated cycles of parasite invasion and destruction of human erythrocytes. In Plasmodium falciparum, the most virulent species causing malaria, erythrocyte invasion involves several specific receptor-ligand interactions that direct the pathway used to invade the host cell, with parasites varying in their dependency on these different pathways. Gene disruption of a key invasion ligand in the 3D7 parasite strain, the P. falciparum reticulocyte binding-like homolog 2b (PfRh2b), resulted in the parasite invading via a novel pathway. Here, we show results that suggest the molecular basis for this novel pathway is not due to a molecular switch but is instead mediated by the redeployment of machinery already present in the parent parasite but masked by the dominant role of PfRh2b. This would suggest that interactions directing invasion are organized hierarchically, where silencing of dominant invasion ligands reveal underlying alternative pathways. This provides wild parasites with the ability to adapt to immune-mediated selection or polymorphism in erythrocyte receptors and has implications for the use of invasion-related molecules in candidate vaccines.


Asunto(s)
Malaria Falciparum/genética , Malaria Falciparum/parasitología , Plasmodium falciparum/genética , Plasmodium falciparum/patogenicidad , Animales , Eritrocitos/parasitología , Genes Protozoarios , Humanos , Malaria Falciparum/sangre , Plasmodium falciparum/aislamiento & purificación , Receptores de Superficie Celular/sangre , Transcripción Genética
15.
Mol Microbiol ; 55(1): 162-74, 2005 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-15612925

RESUMEN

The Apicomplexan parasite responsible for the most virulent form of malaria, Plasmodium falciparum, invades human erythrocytes through multiple ligand-receptor interactions. Some strains of P. falciparum are sensitive to neuraminidase treatment of the host erythrocyte and these parasites have been termed sialic acid-dependent as they utilize receptors containing sialic acid. In contrast, other strains can efficiently invade neuraminidase-treated erythrocytes and hence are sialic acid-independent. The molecular interactions that allow P. falciparum to differentially utilize receptors for merozoite invasion are not understood. The P. falciparum reticulocyte-binding protein homologue (PfRh or PfRBL) family have been implicated in the invasion process but their exact role is unknown. PfRh1, a member of this protein family, appears to be expressed in all parasite lines analysed but there are marked differences in the level of expression between different strains. We have used targeted gene disruption of the PfRh1 gene in P. falciparum to show that the encoded protein is required for sialic acid-dependent invasion of human erythrocytes. The DeltaPfRh1 parasites are able to invade normally; however, they utilize a pattern of ligand-receptor interactions that are more neuraminidase-resistant. Current data suggest a strategy based on the differential function of specific PfRh proteins has evolved to allow P. falciparum parasites to utilize alternative receptors on the erythrocyte surface for evasion of receptor polymorphisms and the host immune system.


Asunto(s)
Eritrocitos/parasitología , Plasmodium falciparum/patogenicidad , Proteínas Protozoarias/fisiología , Animales , Adhesión Celular , Eritrocitos/química , Eliminación de Gen , Marcación de Gen , Genes Protozoarios , Humanos , Técnicas In Vitro , Ligandos , Ácido N-Acetilneuramínico/metabolismo , Neuraminidasa/metabolismo , Plasmodium falciparum/genética , Proteínas Protozoarias/genética , Factores de Virulencia/genética , Factores de Virulencia/fisiología
16.
Cell ; 121(1): 13-24, 2005 Apr 08.
Artículo en Inglés | MEDLINE | ID: mdl-15820675

RESUMEN

The malaria parasite Plasmodium falciparum undergoes antigenic variation to evade host immune responses through switching expression of variant surface proteins encoded by the var gene family. We demonstrate that both a subtelomeric transgene and var genes are subject to reversible gene silencing. Var gene silencing involves the SIR complex as gene disruption of PfSIR2 results in activation of this gene family. We also demonstrate that perinuclear gene activation involves chromatin alterations and repositioning into a location that may be permissive for transcription. Together, this implies that locus repositioning and heterochromatic silencing play important roles in the epigenetic regulation of virulence genes in P. falciparum.


Asunto(s)
Variación Antigénica/genética , Compartimento Celular/genética , Ensamble y Desensamble de Cromatina/genética , Silenciador del Gen/inmunología , Heterocromatina/genética , Malaria Falciparum/parasitología , Plasmodium falciparum/genética , Plasmodium falciparum/patogenicidad , Animales , Variación Antigénica/inmunología , Compartimento Celular/inmunología , Núcleo Celular/genética , Núcleo Celular/inmunología , Cromosomas/genética , Cromosomas/inmunología , Genes Protozoarios/genética , Genes Protozoarios/inmunología , Heterocromatina/inmunología , Humanos , Hibridación Fluorescente in Situ , Malaria Falciparum/genética , Análisis por Micromatrices , Plásmidos/genética , Plásmidos/inmunología , Plasmodium falciparum/inmunología , Telómero/genética , Tetrahidrofolato Deshidrogenasa/genética , Virulencia/genética
17.
Science ; 306(5703): 1930-3, 2004 Dec 10.
Artículo en Inglés | MEDLINE | ID: mdl-15591202

RESUMEN

To establish infection in the host, malaria parasites export remodeling and virulence proteins into the erythrocyte. These proteins can traverse a series of membranes, including the parasite membrane, the parasitophorous vacuole membrane, and the erythrocyte membrane. We show that a conserved pentameric sequence plays a central role in protein export into the host cell and predict the exported proteome in Plasmodium falciparum. We identified 400 putative erythrocyte-targeted proteins corresponding to approximately 8% of all predicted genes, with 225 virulence proteins and a further 160 proteins likely to be involved in remodeling of the host erythrocyte. The conservation of this signal across Plasmodium species has implications for the development of new antimalarials.


Asunto(s)
Secuencias de Aminoácidos , Plasmodium falciparum/metabolismo , Plasmodium falciparum/patogenicidad , Señales de Clasificación de Proteína , Proteínas Protozoarias/metabolismo , Factores de Virulencia/metabolismo , Secuencia de Aminoácidos , Animales , Biología Computacional , Citoplasma/metabolismo , Membrana Eritrocítica/metabolismo , Perfilación de la Expresión Génica , Genes Protozoarios , Humanos , Interacciones Hidrofóbicas e Hidrofílicas , Malaria Falciparum/parasitología , Proteínas de la Membrana/química , Proteínas de la Membrana/metabolismo , Datos de Secuencia Molecular , Análisis de Secuencia por Matrices de Oligonucleótidos , Plasmodium/química , Plasmodium/genética , Plasmodium/metabolismo , Plasmodium falciparum/genética , Plasmodium falciparum/crecimiento & desarrollo , Transporte de Proteínas , Proteínas Protozoarias/química , Proteínas Protozoarias/genética , Proteínas Recombinantes de Fusión/metabolismo , Alineación de Secuencia , Vacuolas/metabolismo , Vacuolas/parasitología , Virulencia , Factores de Virulencia/química , Factores de Virulencia/genética
18.
J Biol Chem ; 278(16): 14480-6, 2003 Apr 18.
Artículo en Inglés | MEDLINE | ID: mdl-12556470

RESUMEN

The recognition and invasion of human erythrocytes by the most lethal malaria parasite Plasmodium falciparum is dependent on multiple ligand-receptor interactions. Members of the erythrocyte binding-like (ebl) family, including the erythrocyte binding antigen-175 (EBA-175), are responsible for high affinity binding to glycoproteins on the surface of the erythrocyte. Here we describe a paralogue of EBA-175 and show that this protein (EBA-181/JESEBL) binds in a sialic acid-dependent manner to erythrocytes. EBA-181 is expressed at the same time as EBA-175 and co-localizes with this protein in the microneme organelles of asexual stage parasites. The receptor binding specificity of EBA-181 to erythrocytes differs from other members of the ebl family and is trypsin-resistant and chymotrypsin-sensitive. Furthermore, using glycophorin B-deficient erythrocytes we show that binding of EBA-181 is not dependent on this sialoglycoprotein. The level of expression of EBA-181 differs among parasite lines, and the importance of this ligand for invasion appears to be strain-dependent as the EBA-181 gene can be disrupted in W2mef parasites, without affecting the invasion phenotype, but cannot be targeted in 3D7 parasites.


Asunto(s)
Antígenos de Protozoos/química , Antígenos de Protozoos/metabolismo , Eritrocitos/inmunología , Eritrocitos/parasitología , Plasmodium falciparum/metabolismo , Tripsina/farmacología , Animales , Antígenos/metabolismo , Antígenos de Superficie , Proteínas Portadoras/química , Proteínas Portadoras/metabolismo , Quimotripsina/farmacología , Electroforesis en Gel de Poliacrilamida , Eritrocitos/metabolismo , Humanos , Immunoblotting , Ligandos , Microscopía Fluorescente , Modelos Genéticos , Fenotipo , Plásmidos/metabolismo , Unión Proteica , Estructura Terciaria de Proteína , Proteínas Protozoarias/química , Proteínas Protozoarias/metabolismo , Recombinación Genética , Sialoglicoproteínas/química , Factores de Tiempo , Transfección
19.
J Infect Dis ; 189(7): 1245-56, 2004 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-15031794

RESUMEN

The primary pathophysiological events contributing to fatal malaria are the cerebral syndrome, anemia, and lactic acidosis. The molecular basis of each event has been unclear. In the present study, microarray analysis of murine transcriptional responses during the development of severe disease revealed temporal, organ-specific, and pathway-specific patterns. More than 400 genes in the brain and 600 genes in the spleen displayed transcriptional changes. Dominant patterns revealed strongly suppressed erythropoiesis, starting early during infection, and highly up-regulated transcription of genes that control host glycolysis, including lactate dehydrogenase. The latter presents a mechanism that may contribute to metabolic acidosis. No evidence for hypoxia-mediated regulation of these events was observed. Interferon-regulated gene transcripts dominated the inflammatory response to cytokines. These results demonstrate previously unknown transcriptional changes in the host that may underlie the development of malarial syndromes, such as anemia and metabolic dysregulation, and increase the utility of murine models in investigation of basic malarial pathogenesis.


Asunto(s)
Eritropoyesis/genética , Glucólisis/genética , Interferón gamma/genética , Malaria/genética , Malaria/metabolismo , Plasmodium berghei , Transcripción Genética/genética , Animales , ADN/genética , Perfilación de la Expresión Génica , Interferón gamma/biosíntesis , Malaria/sangre , Malaria/patología , Ratones , Ratones Endogámicos BALB C , Análisis de Secuencia por Matrices de Oligonucleótidos , Reacción en Cadena de la Polimerasa , ARN Mensajero/biosíntesis , ARN Mensajero/genética , Transcripción Genética/fisiología , Regulación hacia Arriba/fisiología
20.
J Biol Chem ; 277(49): 47524-32, 2002 Dec 06.
Artículo en Inglés | MEDLINE | ID: mdl-12228245

RESUMEN

The Plasmodium falciparum serine repeat antigen (SERA) has shown considerable promise as a blood stage vaccine for the control of malaria. A related protein, SERPH, has also been described in P. falciparum. Whereas their biological role remains unknown, both proteins possess papain-like protease domains that may provide attractive targets for therapeutic intervention. Genomic sequencing has recently shown that SERA and SERPH are the fifth and sixth genes, respectively, in a cluster of eight SERA homologues present on chromosome 2. In this paper, the expression and functional relevance of these eight genes and of a ninth SERA homologue found on chromosome 9 were examined in blood stage parasites. Using reverse transcriptase-PCR and microarray approaches, we demonstrate that whereas mRNA to all nine SERA genes is synthesized late in the erythrocytic cycle, it is those genes in the central region of the chromosome 2 cluster that are substantially up-regulated at this time. Using antibodies specific to each SERA, it was apparent that SERA4 to -6, and possibly also SERA9, are synthesized in blood stage parasites. The reactivity of antibodies from malaria-immune individuals with the SERA recombinant proteins suggested that SERA2 and SERA3 are also expressed at least in some parasite populations. To examine whether SERA genes are essential to blood stage growth, each of the eight chromosome 2 SERA genes was targeted for disruption. Whereas genes at the periphery of the cluster were mostly dispensable (SERA2 and -3 and SERA7 and -8), those in the central region (SERA4 to -6) could not be disrupted. The inability to disrupt SERA4, -5, and -6 is consistent with their apparent dominant expression and implies an important role for these genes in maintenance of the erythrocytic cycle.


Asunto(s)
Antígenos de Protozoos/biosíntesis , Antígenos de Protozoos/genética , Eritrocitos/parasitología , Plasmodium falciparum/genética , Plasmodium falciparum/metabolismo , Animales , Southern Blotting , Western Blotting , Cromosomas , ADN/metabolismo , Electroforesis en Gel de Poliacrilamida , Eritrocitos/metabolismo , Femenino , Técnica del Anticuerpo Fluorescente Indirecta , Glutatión Transferasa/metabolismo , Ratones , Ratones Endogámicos BALB C , Microscopía Fluorescente , Modelos Genéticos , Familia de Multigenes , Análisis de Secuencia por Matrices de Oligonucleótidos , Estructura Terciaria de Proteína , Conejos , Proteínas Recombinantes/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Factores de Tiempo , Transfección
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