The evolutionary history of holometabolous insects inferred from transcriptome-based phylogeny and comprehensive morphological data.

BACKGROUND: Despite considerable progress in systematics, a comprehensive scenario of the evolution of phenotypic characters in the mega-diverse Holometabola based on a solid phylogenetic hypothesis was still missing. We addressed this issue by de novo sequencing transcriptome libraries of representatives of all orders of holometabolan insects (13 species in total) and by using a previously published extensive morphological dataset. We tested competing phylogenetic hypotheses by analyzing various specifically designed sets of amino acid sequence data, using maximum likelihood (ML) based tree inference and Four-cluster Likelihood Mapping (FcLM). By maximum parsimony-based mapping of the morphological data on the phylogenetic relationships we traced evolutionary transformations at the phenotypic level and reconstructed the groundplan of Holometabola and of selected subgroups. RESULTS: In our analysis of the amino acid sequence data of 1,343 single-copy orthologous genes, Hymenoptera are placed as sister group to all remaining holometabolan orders, i.e., to a clade Aparaglossata, comprising two monophyletic subunits Mecopterida (Amphiesmenoptera + Antliophora) and Neuropteroidea (Neuropterida + Coleopterida). The monophyly of Coleopterida (Coleoptera and Strepsiptera) remains ambiguous in the analyses of the transcriptome data, but appears likely based on the morphological data. Highly supported relationships within Neuropterida and Antliophora are Raphidioptera + (Neuroptera + monophyletic Megaloptera), and Diptera + (Siphonaptera + Mecoptera). ML tree inference and FcLM yielded largely congruent results. However, FcLM, which was applied here for the first time to large phylogenomic supermatrices, displayed additional signal in the datasets that was not identified in the ML trees. CONCLUSIONS: Our phylogenetic results imply that an orthognathous larva belongs to the groundplan of Holometabola, with compound eyes and well-developed thoracic legs, externally feeding on plants or fungi. Ancestral larvae of Aparaglossata were prognathous, equipped with single larval eyes (stemmata), and possibly agile and predacious. Ancestral holometabolan adults likely resembled in their morphology the groundplan of adult neopteran insects. Within Aparaglossata, the adult's flight apparatus and ovipositor underwent strong modifications. We show that the combination of well-resolved phylogenies obtained by phylogenomic analyses and well-documented extensive morphological datasets is an appropriate basis for reconstructing complex morphological transformations and for the inference of evolutionary histories.

Morphological and molecular evidence converge upon a robust phylogeny of the megadiverse Holometabola.

We present the largest morphological character set ever compiled for Holometabola. This was made possible through an optimized acquisition of data. Based on our analyses and recently published hypotheses based on molecular data, we discuss higher-level phylogeny and evolutionary changes. We comment on the information content of different character systems and discuss the role of morphology in the age of phylogenomics. Microcomputer tomography in combination with other techniques proved highly efficient for acquiring and documenting morphological data. Detailed anatomical information (356 characters) is now available for 30 representatives of all holometabolan orders. A combination of traditional and novel techniques complemented each other and rapidly provided reliable data. In addition, our approach facilitates documenting the anatomy of model organisms. Our results show little congruence with studies based on rRNA, but confirm most clades retrieved in a recent study based on nuclear genes: Holometabola excluding Hymenoptera, Coleopterida (= Strepsiptera + Coleoptera), Neuropterida excl. Neuroptera, and Mecoptera. Mecopterida (= Antliophora + Amphiesmenoptera) was retrieved only in Bayesian analyses. All orders except Megaloptera are monophyletic. Problems in the analyses are caused by taxa with numerous autapomorphies and/or inapplicable character states due to the loss of major structures (such as wings). Different factors have contributed to the evolutionary success of various holometabolan lineages. It is likely that good flying performance, the ability to occupy different habitats as larvae and adults, parasitism, liquid feeding, and co-evolution with flowering plants have played important roles. We argue that even in the "age of phylogenomics", comparative morphology will still play a vital role. In addition, morphology is essential for reconstructing major evolutionary transformations at the phenotypic level, for testing evolutionary scenarios, and for placing fossil taxa. © The Willi Hennig Society 2010.

A simple "hands-off" apparatus to inflate concealed soft parts of the genitalia of small insect specimens.

We describe a simple, effective and relatively cheap instrument for the inflation of soft parts of insect genitalia, particularly the vesica (endophallus) of small male lepidopteran specimens. It can also be applied in female genitalia and for the hyperextension of postabdominal segments of the telescoping type. A fine glass capillary is mounted on a self-constructed micromanipulator system with capillary holder, moveably placed aside a microscope. The micromanipulator is constructed from the x- and y-pinions of a discarded microscope table and the z-pinion of a discarded microscope. Preparation is carried out as usual on a microscopic slide. The inflatable soft parts are pushed out mechanically and then fully inflated and subsequently hardened by pumping absolute alcohol with a medical syringe via a flexible PVC tube, the capillary holder and the glass capillary into the phallus. With affordable effort, our "hands-off"apparatus might considerably ease preparation.

The skeletomuscular system of the larva of Drosophila melanogaster (Drosophilidae, Diptera): a contribution to the morphology of a model organism.

The morphological features of the third instar larva of the most important insect model, Drosophila melanogaster, are documented for the first time using a broad spectrum of modern morphological techniques. External structures of the body wall, the cephaloskeleton, and the musculature are described and illustrated. Additional information about other internal organs is provided. The systematic implications of the findings are discussed briefly. Internal apomorphic features of Brachycera and Cyclorrhapha are confirmed for Drosophila. Despite the intensive investigations of the phylogeny of the megadiverse Diptera, evolutionary reconstructions are still impeded by the scarcity of anatomical data for brachyceran larvae. The available morphological information for the life stages of three insect model organisms -D. melanogaster (Diptera, Drosophilidae), Manduca sexta (Lepidoptera, Sphingidae) and Tribolium castaneum (Coleoptera, Tenebrionidae) - is addressed briefly. The usefulness of a combination of traditional and innovative techniques for an optimized acquisition of anatomical data for different life stages is highlighted.

The female postabdomen and genitalia of the basal moth family Heterobathmiidae (Insecta: Lepidoptera): structure and phylogenetic significance.

Female Heterobathmia have the segments behind VIII forming a compact 'terminal unit' with a large saddle-shaped dorsal plate and a membranous ventroposterior surface bearing the separate gonopore and anus. While females of most of the nine known species are overall similar, Heterobathmia valvifer is unique amongst lepidopterans in possessing paired ventral appendages ('ovipositor valves') arising from the intersegmental groove following segment VIII; evidence from musculature contradicts an interpretation of these appendages structures as 'true' ovipositor valves. The ventroposterior wall of the terminal unit in H. valvifer bears paired sclerites, possible homologues of the 'ventral rods' in basal Lepidoptera-Glossata. In Heterobathmia megadecella sclerites on paired longitudinal elevations in comparable positions probably are/include homologues of these sclerites. Their similarity with paired sclerotizations in the corresponding region of hydrobiosid caddisflies is noted. A prominent frame-like sclerotization in the genital chamber, located in front of the spermathecal duct origin, is present only in H. megadecella. Putative heterobathmiid autapomorphies include an enlarged 'subgenital plate' on venter VIII, absence of apophyses on segment VIII, shortened apophyses on the terminal unit, multilobed accessory glands (but their 'type 1' secretory epithelium is plesiomorphic at this level), a conspicuous papilla in the chamber cuticle bearing the opening of the ductus bursae on its apex, and inwards-pointing spines in the ductus bursae. A variably developed thickening of the anterior genital chamber intima is another putative family autapomorphy, while an extreme thickening of the posterior intima seen in Heterobathmia pseuderiocrania is not of general occurrence in heterobathmiids. A sistergroup relationship between Heterobathmiidae and Glossata is supported by their fully developed '2-compartment section' of the spermathecal duct and losses of some likely lepidopteran groundplan muscles.

The evolution of "deformed" brains in ant-like stone beetles (Scydmaeninae, Staphylinidae).

We present the first study of the central nervous system of adult representatives of Scydmaeninae. Histological staining, scanning electron microscopy and computer-based 3D reconstruction techniques were used to document the shape and configuration of the major cephalic elements of the central nervous system and to explain its anomalies compared to other Coleoptera. For the first time we report the presence of cephalic glands in ant-like stone beetles: in Scydmaenus (Cholerus) hellwigii openings of voluminous glands are located near the occipital constriction and their secretion accumulates in a large cavity of the dorsal head region. In Scydmaenus (Cholerus) perrisi the proto-, deuto-, tritocerebrum and the suboesophageal ganglion together form a large and compact ganglionic mass around the anterior foregut in the retracted neck region of the head. We exclude miniaturization as the driving force of the observed modifications. Comparative study of the head anatomy of S. perrisi, S. hellwigii, Scydmaenus (s. str.) tarsatus, Scydmaenus (Parallomicrus) rufus and Neuraphes elongatulus suggests a possible evolutionary scenario. We propose an evolutionary reversal hypothesis, involving a) the displacement and concentration of the cephalic central nervous system induced by the development of glandular cavities of the head, followed by b) a reduction of the glandular structures, without a secondary relocation of the cephalic CNS. The interpretation of head modifications in Scydmaeninae in the light of such a scenario may turn out as important for the reconstruction of the phylogeny and evolution of this highly successful group of beetles.

The morphology and evolution of the female postabdomen of Holometabola (Insecta).

In the present article homology issues, character evolution and phylogenetic implications related to the female postabdomen of the holometabolan insects are discussed, based on an earlier analysis of a comprehensive morphological data set. Hymenoptera, the sistergroup of the remaining Holometabola, are the only group where the females have retained a fully developed primary ovipositor of the lepismatid type. There are no characters of the female abdomen supporting a clade Coleopterida + Neuropterida. The invagination of the terminal segments is an autapomorphy of Coleoptera. The ovipositor is substantially modified in Raphidioptera and distinctly reduced in Megaloptera and Neuroptera. The entire female abdomen is extremely simplified in Strepsiptera. The postabdomen is tapering posteriorly in Mecopterida and retractile in a telescopic manner (oviscapt). The paired ventral sclerites of segments VIII and IX are preserved, but valvifers and valvulae are not distinguishable. In Amphiesmenoptera sclerotizations derived from the ventral appendages VIII are fused ventromedially, forming a solid plate, and the appendages IX are reduced. The terminal segments are fused and form a terminal unit which bears the genital opening subapically. The presence of two pairs of apophyses and the related protraction of the terminal unit by muscle force are additional autapomorphies, as is the fusion of the rectum with the posterior part of the genital chamber (cloaca). Antliophora are supported by the presence of a transverse muscle between the ventral sclerites of segment VIII. Secondary egg laying tubes have evolved independently within Boreidae (absent in Caurinus) and in Tipulomorpha. The loss of two muscle associated with the genital chamber are likely autapomorphies of Diptera. The secondary loss of the telescopic retractability of the postabdomen is one of many autapomorphies of Siphonaptera.

The larval abdomen of the enigmatic Nannochoristidae (Mecoptera, Insecta).

External and internal structures of the larval abdomen of Nannochorista are described in detail, with emphasis on the posterior segments. The results are compared with conditions found in other groups of Antliophora, especially the mecopteran subgroups Boreidae and Pistillifera. Like the entire postcephalic body, the larval abdomen of Nannochorista is extremely slender and nearly cylindrical. The anterior segments are largely unmodified. The surface is smooth and lacks any protuberances or prolegs. The term "cloaca" for the posterior membranous pouch of Nannochorista sp. is morphologically unjustified. A list of muscles of segments IX and X is presented. The abdominal musculature was partly homologized following Snodgrass. The muscles of segment X are highly modified. They move the membranous pouch, the anal papillae, and the terminal lobes. The presence of these structures is likely an adaptation to the specific aquatic life style of nannochoristid larvae. The anal papillae are possibly homologous to the 4-lobed terminal attachment apparatus of larvae of Caurinus (Boreidae) and Pistillifera (Panorpidae, Bittacidae, Choristidae) but this is uncertain. The specific condition in both groups, i.e. two retractile papillae with tracheae and Malpighian tubules in Nannochoristidae, and a 4-lobed exposed attachment device in Pistillifera + Boreidae (groundplan) are very likely autapomorphic for both groups, respectively. A slender abdomen with smooth surface is very likely plesiomorphic within Antliophora and Mecopterida. This condition is found in Trichoptera (partim), Nannochoristidae, Siphonaptera, and many basal groups of Diptera. An eruciform or scarabaeiform body shape with a soft, largely unsclerotised cuticle is probably a synapomorphy of Boreidae and Pistillifera. The presence of ventral protuberances resembling prolegs on the anterior segments is an autapomorphy of the latter group. The homology of paired or unpaired terminal appendages of segment X is uncertain. However, the specific condition of paired and 3-segmented appendages with hooks in Nannochoristidae is almost certainly autapomorphic for this family. The protracted opening of the hind gut on the membranous pouch is another potential autapomorphy of Nannochoristidae. Aquatic habits of larvae, also very likely an apomorphic condition, have likely evolved several times independently in Antliophora.

The male postabdomen of the "ancestral" archostematan beetle Tetraphalerus bruchi Heller, 1913 (Ommatidae) and its phylogenetic significance.

External and internal features of the male postabdomen of Tetraphalerus bruchi were examined with a broad spectrum of morphological techniques and are described in detail. The conditions found in males of Tetraphalerus are compared to those in other archostematan beetles and members of other coleopteran suborders. The far-reaching reduction of the sternite I, structural modifications of sternite II, the retracted condition of the terminal segments, and ventromedially fused apodemes arising from the anterior margin of tergite IX are likely autapomorphies of Coleoptera. The male postabdomen of Tetraphalerus is less derived than in most other groups of Coleoptera. The sclerotized elements are symmetrical. In contrast to earlier statements on the archostematan male genital apparatus a distinctly developed, sclerotized basal piece is present. The aedeagus is trilobed and all elements of the copulatory apparatus are distinct. The muscular equipment is simple and moderately developed. All muscles (except the transverse muscles 61 and 62) occur pairwise and symmetrically. The distinct increase of the number of postabdominal muscles in representatives of the higher lineages of Coleoptera is likely linked with a torsion of the copulatory apparatus, which also results in asymmetries of the sclerotised parts. The testes of Tetraphalerus are long, multi-coiled tubes like in other archostematans, Myxophaga (Torridincola) and Adephaga. The presence of a deep notch on the parameres is a synapomorphy of Tetraphalerus and Omma. Curved parameres, a shortened distal portion, and a distinctly shortened penis are potential synapomorphies of Omma rutherfordi and Omma mastersi. The large size of the sclerotized part of the phallobase ('basal piece') and the division of the sclerotization of sternum IX are potential ground-plan autapomorphies of Archostemata, with secondary modification of the latter feature in Cupedidae. The reduced condition of the sclerotization of sternum VIII is an apomorphic condition which has likely evolved independently in Tetraphalerus and Paracupes. Further anatomical investigation of the male genital apparatus of Coleoptera and holometabolous insects in general is required for a reliable morphological and phylogenetic interpretation. Concerning the presence or absence of particular sclerotizations (e.g., 'basal piece' of phallobase) histological section series and Confocal Laser Scanning Microscopy can add more precise information to what can be observed using permanent preparations of macerated specimens.