Rat-Bite Fever in Human with Streptobacillus notomytis Infection, Japan.

We report a case of rat-bite fever in a 94-year-old woman with Streptobacillus notomytis infection. We established an epidemiologic link between exposure to rats and human infection by performing nested PCRs that detected S. notomytis in the intraoral swab specimens obtained from rats captured in the patient's house.

A study of the red-shift of a neutral donor bound exciton in GaN nanorods by hydrogenation.

In this paper we account for the physics behind the exciton peak shift in GaN nanorods (NRs) due to hydrogenation. GaN NRs were selectively grown on a patterned Ti/Si(111) substrate using plasma-assisted molecular beam epitaxy, and the effect of hydrogenation on their optical properties was investigated in detail using low-temperature photoluminescence measurements. Due to hydrogenation, the emissions corresponding to the donor-acceptor pair and yellow luminescence in GaN NRs were strongly suppressed, while the emission corresponding to the neutral to donor bound exciton (D0X) exhibited red-shift. Thermal annealing of hydrogenated GaN NRs demonstrated the recovery of the D0X and deep level emission. To determine the nature of the D0X peak shift due to hydrogenation, comparative studies were carried out on various diameters of GaN NRs, which can be controlled by different growth conditions and wet-etching times. Our experimental results reveal that the D0X shift depends on the diameter of the GaN NRs after hydrogenation. The results clearly demonstrate that the hydrogenation leads to band bending of GaN NRs as compensated by hydrogen ions, which causes a red-shift in the D0X emission.

Bacteremia secondary to Alloscardovia omnicolens urinary tract infection.

A 70-year-old woman was admitted to our hospital with malaise, bilateral leg edema, and oliguria. She had a history of advanced uterine cancer. Bilateral double-J catheters were inserted because growth of intra-abdominal metastases led to bilateral ureteral stricture and hydronephrosis. Two days later, she suddenly developed high fever. Thin gram-positive bacilli of moderate length were detected in the anaerobic blood culture bottles. We performed 16S ribosomal RNA analysis of the isolate and it showed 100% match with Alloscardovia omnicolens DSM 21503(T). She was successfully treated with cefmetazole in addition to percutaneous nephrostomy.

A first case of isolation of Kerstersia gyiorum from urinary tract.

An 82-year-old man with percutaneous nephrostomy presented to our Hospital with dysuria for one day. The patient's percutaneous nephrostomy tube was exchanged, with about 20 mL of creamy purulent urine being collected. Direct smear of the urine specimen showed polymorphonuclear leukocytes and small Gram-negative bacilli, some of which had undergone phagocytosis. This organism was identified as Kerstersia gyiorum using 16S ribosomal RNA gene analysis. He was successfully recovered with exchange of his percutaneous nephrostomy tube and fluoroquinolone internal use treatment. This is the first case report of urinary tract infection due to K. gyiorum.

Thinning enhances forest soil C storage by shifting the soil toward an oligotrophic condition.

Forests are significant carbon reservoirs, with approximately one-third of this carbon stored in the soil. Forest thinning, a prevalent management technique, is designed to enhance timber production, preserve biodiversity, and maintain ecosystem functions. Through its influence on biotic and abiotic factors, thinning can profoundly alter soil carbon storage. Yet, the full implications of thinning on forest soil carbon reservoirs and the mechanisms underpinning these changes remain elusive. In this study, we undertook a two-year monitoring initiative, tracking changes in soil extracellular enzyme activities (EEAs), microbial communities, and other abiotic parameters across four thinning intensities within a temperate pine forest. Our results show a marked increase in soil carbon stock following thinning. However, thinning also led to decreased dissolved organic carbon (DOC) content and a reduced DOC to soil organic carbon (SOC) ratio, pointing toward a decline in soil carbon lability. Additionally, fourier transform infrared spectroscopy (FTIR) analysis revealed an augmented relative abundance of aromatic compounds after thinning. There was also a pronounced increase in absolute EEAs (per gram of dry soil) post-thinning, implying nutrient limitations for soil microbes. Concurrently, the composition of bacterial and fungal communities shifted toward oligotrophic dominance post thinning. Specific EEAs (per gram of soil organic matter) exhibit a significant reduction following thinning, indicating a deceleration in organic matter decomposition rates. In essence, our findings reveal that thinning transitions soil toward an oligotrophic state, dampening organic matter decomposition, and thus bolstering the soil carbon storage potential of forest. This study provides enhanced insights into the nuanced relationship between thinning practices and forest soil carbon dynamics, serving as a robust foundation for enlightened forest management strategies.

Multi-site assessment of soil nitrogen stocks across temperate forests under different thinning intensities, recovery times, and site conditions.

Increasing research interests have been paid to understand the factors controlling soil nitrogen (N) stocks under diverse environmental conditions and forest thinning regimes. This study investigated soil N stocks across 13 temperate forests, each of which received three thinning intensities (unthinned control, 15-30 %, and 30-50 % basal area removals) under varying pre-treatment conditions (altitude, slope, soil pH, soil moisture, stand age, stand density, diameter at breast height, and tree height). The total N stored in the forest floor (L, F, and H layers) and mineral soils (0-10, 10-20, and 20-30 cm) was determined 1, 4, and 7 years after thinning. Given the various site conditions and thinning regimes, a standardized effect size was used to analyze the influences of thinning on N stocks. The N stocks (Mg N ha-1) of the forest floor and at 0-10, 10-20, and 20-30 cm mineral soil depths were 0.02-0.46, 0.32-3.21, 0.29-3.03, and 0.25-2.54 across all studied forests, respectively. The averaged effect sizes indicated decrease in forest floor N stocks and increase in mineral soil N stocks under thinning due to the reduced litterfall and eventual input of thinning residues. Thinning intensity negatively affected the effect sizes for the N stocks (P < 0.05), suggesting that excessively heavy thinning may be inappropriate for retaining forest soil N. However, multimodel inference showed that soil pH (relative importance = 1.00) and stand age (relative importance = 0.42) had the largest influence on the effect sizes for forest floor and mineral soil N stocks. This pattern suggests that the effects of thinning on soil N stocks might vary with pre-treatment conditions, even more than thinning intensities and recovery time; therefore, thinning to manage forest soil N should consider pre-treatment environmental conditions in addition to thinning regime.

Soil organic carbon is a key determinant of CH4 sink in global forest soils.

Soil organic carbon (SOC) is a primary regulator of the forest-climate feedback. However, its indicative capability for the soil CH4 sink is poorly understood due to the incomplete knowledge of the underlying mechanisms. Therefore, SOC is not explicitly included in the current model estimation of the global forest CH4 sink. Here, using in-situ observations, global meta-analysis, and process-based modeling, we provide evidence that SOC constitutes an important variable that governs the forest CH4 sink. We find that a CH4 sink is enhanced with increasing SOC content on regional and global scales. The revised model with SOC function better reproduces the field observation and estimates a 39% larger global forest CH4 sink (24.27 Tg CH4 yr-1) than the model without considering SOC effects (17.46 Tg CH4 yr-1). This study highlights the role of SOC in the forest CH4 sink, which shall be factored into future global CH4 budget quantification.

Effects of vegetation shift from needleleaf to broadleaf species on forest soil CO2 emission.

Forest soil harbors diverse microbial communities with decisive roles in ecosystem processes. Vegetation shift from needleleaf to broadleaf species is occurring across the globe due to climate change and anthropogenic activities, potentially change forest soil microbial communities and C cycle. However, our knowledge on the impact of such vegetation shift on soil microbial community and activities, and its consequences on forest soil C dynamics are still not well established. Here, we examined the seasonal variation of soil CO2 emission, soil extracellular enzyme activities (EEAs), and soil bacterial, fungal communities in subtropical forest from broadleaf, needleleaf, and mixed stands. In addition, soil CO2 emission and soil EEAs were measured in temperate forest during the growing season. Soil organic matter (SOM) content significantly differs between broadleaf and needleleaf forests and primarily distinguish various soil chemical and microbial characteristics. Significantly higher EEAs and soil CO2 emission in broadleaf forest compared to needleleaf forest were observed both in subtropical and temperate forests. The relative abundance of Basidiomycota positively correlated with SOM and EEAs and indirectly increase soil CO2 emission whereas the relative abundance of Ascomycota exhibits opposite trend, suggesting that soil fungal communities play a key role in determining the different microbial activities between broadleaf and needleleaf stands. The temperature sensitivity of soil CO2 emission was significantly higher in broadleaf forest compared to needleleaf forest, further suggesting that the soil organic carbon in broadleaf forests is more vulnerable to warming.

Effect of Trap Behavior on the Reliability Instability of Metamorphic Buffer in InAlAs/InGaAs MHEMT on GaAs.

Our investigation focused on assessing the influence of the metamorphic buffer in metamorphic high-electron-mobility transistors (MHEMT) that were grown on GaAs substrates. While an MHEMT exhibited elevated off-state current levels, its direct current (DC) and radio frequency (RF) traits were found to be comparable to those of InP-based lattice-matched high-electron-mobility transistors (LM-HEMTs). However, the Pulsed I-V measurement results confirmed the presence of the fast transient charging effect, leading to a more substantial degradation in drain current observed in MHEMT. In addition, through the low-frequency noise characteristics, it was confirmed that the dominant trapping location was located in the bulk site. The slope of the 1/f noise measurement indicated that the primary trapping site was in proximity to the bulk traps. The carrier-number-fluctuation (CNF) model was employed to extract the bulk trap density (Nt). For the LM-HEMTs, the value was at 3.27 × 1016 eV-1·cm-3, while for the MHEMT, it was 3.56 × 1017 eV-1·cm-3.

The growth of a low defect InAs HEMT structure on Si by using an AlGaSb buffer layer containing InSb quantum dots for dislocation termination.

It is found that the surface migration and nucleation behaviors of InSb quantum dots on AlSb/Si substrates, formed by molecular beam epitaxy in Stranski-Krastanov (SK) growth mode, are dependent on the substrate temperature. At relatively high temperatures above 430 degrees C, quantum dots are migrated and preferentially assembled onto the surface steps of high defect AlSb layers grown on Si substrates, while they are uniformly distributed on the surface at lower temperatures below 400 degrees C. It is also found that quantum dots located on the defect sites lead to effective termination of the propagation of micro-twin-induced structural defects into overlying layers, resulting in the low defect material grown on a largely mismatched substrate. The resulting 1.0 microm thick Al(x)Ga(1-x)Sb (x = 0.8) layer grown on the silicon substrate shows atomically flat (0.2 nm AFM mean roughness) surface and high crystal quality, represented by a narrow full width at half-maximum of 300 arc s in the x-ray rocking curve. The room-temperature electron mobility of higher than 16 000 cm(2) V(-1) s(-1) in InAs/AlGaSb FETs on the Si substrate is obtained with a relatively thin buffer layer, when a low defect density ( approximately 10(6) cm(-2)) AlGaSb buffer layer is obtained by the proposed method.

Microbial biomass and enzymatic responses to temperate oak and larch forest thinning: Influential factors for the site-specific changes.

Microbial biomass and enzyme activity are essential for ecosystem function in managed forests; however, uncertainty remains because microbial biomass and enzymatic responses to thinning highly differ with case studies. This study addressed the drivers for the site-specific responses of microbial biomass and enzyme activity to thinning. Study sites included two oak and three larch forests; each had un-thinned control, intermediate thinning (15-23% basal area reduction), and heavy thinning treatments (30-44% basal area reduction). Soil properties (temperature, water content, pH, total and inorganic nitrogen, and total carbon/nitrogen ratio), microbial biomass, enzyme (ß-glucosidase, N-acetylglucosaminidase, leucyl aminopeptidase, acid phosphatase, and phenol oxidase) activity, and soil carbon storage were determined 6 years after thinning. Compared to the control, microbial biomass carbon and nitrogen were higher under the intermediate and the heavy thinning by 13.9 and 24.4% and 11.5 and 29.9% at one oak forests, respectively, and higher under the intermediate thinning by 53.7 and 70.7% at one larch forests. There were the post-thinning changes in leucyl aminopeptidase activity by -46.9% and by 150.0-210.0% at an oak and larch forest, respectively, acid phosphatase activity by 60.0% at one oak forest, and phenol oxidase activity by 355.0% at one oak forest. The effect sizes of thinning for soil properties explained 94% and 77% of variance of the effect sizes for microbial biomass and enzyme activity. Especially, the effect sizes for soil water content, NH4+, total carbon/nitrogen ratio, and temperature were the most influential. Furthermore, the effect size for soil carbon storage was parabolically related to the effect size for microbial biomass carbon (R2 = 0.66). These findings highlight that inconsistent thinning effects on soil properties varied microbial biomass and enzymatic responses to thinning, which differentiated the change in soil carbon storage across sites. Future studies should consider such inconsistencies when examining the effects of forest management.

Molecular epidemiology and clinical features of extended-spectrum beta-lactamase- or carbapenemase-producing Escherichia coli bacteremia in Japan.

OBJECTIVES: To identify risk factors and clinical outcomes in patients with bacteremia due to extended-spectrum beta-lactamase (ESBL) or carbapenemase-producing Escherichia coli, as well as to determine the prevalence and genetic background of such isolates. METHODS: Case control study was performed with patients with E. coli bacteremia between January 2008 and May 2013 (n = 115) at a tertiary university hospital in Japan. Cases had ESBL-producing E. coli (ESBL-EC) whereas controls had non-ESBL-producing E. coli (non-ESBL-EC) isolates. A retrospective chart review was performed to identify risk factors and clinical outcomes. Isolates were characterized by antimicrobial susceptibility testing, polymerase chain reaction analysis for beta-lactamase genes, and multi-locus sequence typing. RESULTS: Of 115 unique cases of E. coli bacteremia, 30 (26.1%) were due to ESBL-EC and three (2.6%) were due to carbapenemase-producing E. coli. All three carbapenemase-producing E. coli isolates were IMP-6 and concurrently produced ESBL (ESBL/IMP-6-EC). ESBL-EC isolates showed multidrug resistance. Of the ESBL-EC isolates, CTX-M-27 was the most prevalent (33.3%), followed by CTX-M-14 (30%). Multi-locus sequence typing revealed that 19 (63.3%) isolates were ST131. The multivariate analysis identified nursing home-associated infections and antibiotic administration in the preceding 30 days as risk factors for ESBL-EC bacteremia. The 14-day mortality non-ESBL-EC, ESBL-EC, and ESBL/IMP-6-EC was 4.7% (4/85), 20% (6/30), and 66.7% (2/3), respectively. CONCLUSIONS: CTX-M-27, CTX-M-14, and ST131 were the most prevalent ESBL-EC isolates from bacteremic patients in a Japanese hospital. Further studies with larger sample sizes are warranted to investigate the clinical significance of ESBL-EC and ESBL/IMP-6-EC.

Asymmetric activation in the prefrontal cortex by sound-induced affect.

This study is based on previous information regarding asymmetric activation in the prefrontal cortex by film-induced affects, as well as the inverse proportionality of prefrontal cortex activity to power in the alpha band of EEG. To search for a specific EEG band where the asymmetric activation in the prefrontal cortex by sound-induced affects is mainly reflected, we measured 32 college students' EEGs; 11 bands ranged from 6.5 to 35.0 Hz, at Fp1 and Fp2 sites. The power in the alpha band (8.0 to 13.0 Hz) at Fp2, especially in the alpha-2 band (9.0 to 11.0 Hz) increased while the students listened to music, during which participants reported positive affect. In contrast, the power at Fp1 increased while the students listened to noise, during which participants reported negative affect. These results imply that sound-induced positive affect increases relative left-sided activation in the prefrontal cortex, whereas induced negative affect elicits the opposite pattern of asymmetric activation.

3D surface profiling and high resolution imaging for refining the florin rings and epicuticular wax crystals of Pinus koraiensis needles.

3D surface profiling and high resolution imaging were performed to refine the Florin rings and epicuticular wax crystals of Pinus koraiensis needles. Needles were collected from four-year-old seedlings and air-dried for surface observations. Field emission scanning electron microscopy revealed that stomata were found on the abaxial (lower) surface of needles. Measured as ca. 40 µm long, they were largely elliptical or oval-shaped. Epicuticular wax crystals were present in the epistomatal chambers as well as on the surrounding epidermis. Rodlets were prevalently found on the stomatal bands and furrows as well as within the epistomatal chambers. The presence of wax tubules was ascertained by the distinct terminal openings at their ends. The occurrence of wax ridges was evident on the epidermis near the saw-tooth margins (nonstomatal areas). No distinct wax ridges were detected on the dewaxed needles. Raised Florin rings were distinct on the stomata. White light scanning interferometry showed that the diameter and width of stomata were ca. 44.02 ± 3.33 µm and 32.10 ± 3.30 µm, respectively. Measured from the neighboring epidermis to the stomatal aperture, the mean height of the stoma reached ca. 6.23 ± 1.28 µm. Focus variation metrology allowed measuring the mean elevation angle of the stoma, reaching ca. 41.41 ± 11.25°. This is the first report on a novel approach to the establishment of quantitative criteria of Florin ring classification by nontactile 3D surface profiling beyond the previous qualitative descriptions of Florin rings of coniferous species.

Optical and redox properties of ruthenium phthalocyanine complexes tuned with axial ligand substituents.

The optical and electrochemical properties of the ruthenium phthalocyanine complexes [[(t-Bu)4Pc]Ru(4-Rpy)2], where R = NO2, Me, NH2, and NMe2, are reported. The electron density at the macrocycle may be adjusted using the axial ligand substituents, which have varying electron-donating/withdrawing strengths. Electrochemical data show that the axial pyridine ligand substituents exert significant influence over the phthalocyanine ring-based redox processes. The axial ligands also influence the electronic absorption properties of the complexes with influence also being observed in the electrogenerated oxidized and reduced species.

Analysis of mutual information content for EEG responses to odor stimulation for subjects classified by occupation.

To investigate the changes of cortico-cortical connectivity during odor stimulation of subjects classified by occupation, the mutual information content of EEGs was examined for general workers, perfume salespersons and professional perfume researchers. Analysis of the averaged-cross mutual information content (A-CMI) from the EEGs revealed that among the professional perfume researchers changes in the A-CMI values during odor stimulation were more apparent in the frontal region of the brain, while for the general workers and perfume salespersons such changes were more conspicuous in the overall posterior temporal, parietal and frontal regions. These results indicate that the brains of professional perfume researchers respond to odors mainly in the frontal region, reflecting the function of the orbitofrontal cortex (OFC) due to the occupational requirement of these subjects to discriminate or identify odors. During odor stimulation, the perfume salespersons, although relatively more exposed to odors than the general workers, showed similar changes to the general workers. The A-CMI value is in inverse proportion to psychological preferences of the professional perfume researchers and perfume salespersons, though this is not the case with the general workers. This result suggests that functional coupling for people who are occupationally exposed to odors may be related to psychological preference.