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Anal Biochem ; 657: 114904, 2022 11 15.
Artículo en Inglés | MEDLINE | ID: mdl-36152875

RESUMEN

In the present study, we developed a protein identification method using low-cost and easy-to-operate amino acid composition analysis. The identification program automatically compares the quantitative result for each amino acid concentration obtained from the amino acid analysis to the amino acid composition data retrieved from the UniProt protein database. We found that the accuracy of protein identification using amino acid composition analysis was comparable to that of mass spectrometry analysis. The method was able to distinguish and identify differences in amino acid substitutions of several residues between proteins with high sequence homology. The identification accuracy of proteins was also improved by correcting the concentrations in the program for Cys, Trp, and Ile residues, which cannot be quantified by general sample preparation for amino acid analysis. Moreover, the amino acid analyzer was remotely controlled in accordance with the growing demand for remote work. The measured amino acid data were automatically uploaded to the IoT portal within a few minutes of each measurement, allowing researchers to download data and analyze them using the identification program anywhere and at any time by connecting to a network. The results indicated that the present method is useful for protein identification.


Asunto(s)
Aminoácidos , Proteómica , Aminoácidos/química , Bases de Datos de Proteínas , Espectrometría de Masas , Proteínas/química , Proteómica/métodos
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