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1.
PLoS Genet ; 17(5): e1009561, 2021 05.
Artículo en Inglés | MEDLINE | ID: mdl-33999950

RESUMEN

The DEFECTIVE EMBRYO AND MERISTEMS 1 (DEM1) gene encodes a protein of unknown biochemical function required for meristem formation and seedling development in tomato, but it was unclear whether DEM1's primary role was in cell division or alternatively, in defining the identity of meristematic cells. Genome sequence analysis indicates that flowering plants possess at least two DEM genes. Arabidopsis has two DEM genes, DEM1 and DEM2, which we show are expressed in developing embryos and meristems in a punctate pattern that is typical of genes involved in cell division. Homozygous dem1 dem2 double mutants were not recovered, and plants carrying a single functional DEM1 allele and no functional copies of DEM2, i.e. DEM1/dem1 dem2/dem2 plants, exhibit normal development through to the time of flowering but during male reproductive development, chromosomes fail to align on the metaphase plate at meiosis II and result in abnormal numbers of daughter cells following meiosis. Additionally, these plants show defects in both pollen and embryo sac development, and produce defective male and female gametes. In contrast, dem1/dem1 DEM2/dem2 plants showed normal levels of fertility, indicating that DEM2 plays a more important role than DEM1 in gamete viability. The increased importance of DEM2 in gamete viability correlated with higher mRNA levels of DEM2 compared to DEM1 in most tissues examined and particularly in the vegetative shoot apex, developing siliques, pollen and sperm. We also demonstrate that gamete viability depends not only on the number of functional DEM alleles inherited following meiosis, but also on the number of functional DEM alleles in the parent plant that undergoes meiosis. Furthermore, DEM1 interacts with RAS-RELATED NUCLEAR PROTEIN 1 (RAN1) in yeast two-hybrid and pull-down binding assays, and we show that fluorescent proteins fused to DEM1 and RAN1 co-localize transiently during male meiosis and pollen development. In eukaryotes, RAN is a highly conserved GTPase that plays key roles in cell cycle progression, spindle assembly during cell division, reformation of the nuclear envelope following cell division, and nucleocytoplasmic transport. Our results demonstrate that DEM proteins play an essential role in cell division in plants, most likely through an interaction with RAN1.


Asunto(s)
Arabidopsis/citología , Arabidopsis/genética , Genes Esenciales , Genes de Plantas/genética , Células Germinativas/metabolismo , Alelos , Proteínas de Arabidopsis/metabolismo , División Celular , Supervivencia Celular/genética , Evolución Molecular , Dosificación de Gen , Regulación de la Expresión Génica de las Plantas , Prueba de Complementación Genética , Células Germinativas/citología , Meiosis , Familia de Multigenes , Especificidad de Órganos , Polen/crecimiento & desarrollo , ARN Mensajero/genética , Proteínas de Unión al ARN/metabolismo , Semillas , Transgenes , Proteína de Unión al GTP ran/metabolismo
2.
J Appl Microbiol ; 134(7)2023 Jul 04.
Artículo en Inglés | MEDLINE | ID: mdl-37422439

RESUMEN

AIMS: Show that tomato leaf phyllosphere bacteria are candidates for biocontrol of tomato leaf diseases. METHODS AND RESULTS: Seven bacterial isolates from surface-sterilized Moneymaker tomato plants were tested for growth inhibition of 14 tomato pathogens on potato dextrose agar. Biocontrol assays were conducted with tomato leaf pathogens, Pseudomonas syringae pv. tomato (Pto) and Alternaria solani (A. solani). Two potential isolates showing the greatest inhibition were identified by 16S rDNA sequencing as Rhizobium sp. (isolate b1) and Bacillus subtilis (isolate b2), both produce protease and isolate b2 cellulase. Both reduced tomato leaf infections by Pto and A. solani in detached leaf bioassays. Both bacteria b1 and b2 reduced pathogen development in a tomato growth trial. Bacteria b2 also induced the tomato plant salicylic acid (SA) immune response pathway. Disease suppression in biocontrol assays with b1 and b2 varied between five commercial tomato varieties. CONCLUSIONS: Tomato phyllosphere bacteria when used as phyllosphere inoculants, inhibited tomato diseases caused by Pto and A. solani.


Asunto(s)
Rhizobium , Solanum lycopersicum , Pseudomonas syringae/genética , Bacillus subtilis/genética , Plantas , Hojas de la Planta/microbiología , Enfermedades de las Plantas/microbiología
3.
J Appl Microbiol ; 132(4): 3111-3124, 2022 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-35061923

RESUMEN

AIM: To understand how beneficial bacteria assist chilli plants (Capsicum annuum) in defence against biotrophic or hemibiotrophic pathogens. METHOD AND RESULTS: We quantified marker genes of plant defence pathways in Phytophthora capsici-infected chilli pepper treated with anti-oomycete plant growth-promoting rhizobacteria, Bacillus amyloliquefaciens, Bacillus velezensis and Acinetobacter sp. Plants displayed strong resistance, and the pathogen load in the roots was significantly lower in infected plants treated with bacterial biocontrol agents at all time points tested (1, 2 and 7 days after pathogen inoculation, p < 0.05). Gene expression profiling revealed that P. capsici infection in the absence of beneficial bacteria led to the upregulation of a wide array of defence genes. The addition of biocontrol bacteria modulated defence by further enhancing genes involved in programmed cell death, such as CaLOX1, CaPAL1, CaChitIV and CaPTI1, while suppressing others CaLRR1, a negative regulator of cell death. CONCLUSIONS: Our results suggest that the bacteria exerted a combined effect by directly antagonizing the pathogen and enhancing the expression of key plant defence genes, including those involved in cell death, causing resistance at early stages of infection by this hemibiotrophic pathogen.


Asunto(s)
Capsicum , Phytophthora , Apoptosis , Bacterias , Capsicum/genética , Capsicum/microbiología , Phytophthora/genética , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/prevención & control , Rizosfera
4.
New Phytol ; 229(5): 2873-2885, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-33131088

RESUMEN

An emerging experimental framework suggests that plants under biotic stress may actively seek help from soil microbes, but empirical evidence underlying such a 'cry for help' strategy is limited. We used integrated microbial community profiling, pathogen and plant transcriptive gene quantification and culture-based methods to systematically investigate a three-way interaction between the wheat plant, wheat-associated microbiomes and Fusarium pseudograminearum (Fp). A clear enrichment of a dominant bacterium, Stenotrophomonas rhizophila (SR80), was observed in both the rhizosphere and root endosphere of Fp-infected wheat. SR80 reached 3.7 × 107 cells g-1 in the rhizosphere and accounted for up to 11.4% of the microbes in the root endosphere. Its abundance had a positive linear correlation with the pathogen load at base stems and expression of multiple defence genes in top leaves. Upon re-introduction in soils, SR80 enhanced plant growth, both the below-ground and above-ground, and induced strong disease resistance by boosting plant defence in the above-ground plant parts, but only when the pathogen was present. Together, the bacterium SR80 seems to have acted as an early warning system for plant defence. This work provides novel evidence for the potential protection of plants against pathogens by an enriched beneficial microbe via modulation of the plant immune system.


Asunto(s)
Microbiología del Suelo , Suelo , Fusarium , Raíces de Plantas , Rizosfera , Stenotrophomonas
5.
J Phycol ; 57(1): 258-268, 2021 02.
Artículo en Inglés | MEDLINE | ID: mdl-33025589

RESUMEN

Phaeodactylum tricornutum is a lipid-rich marine diatom that contains a high level of omega-3 polyunsaturated fatty acids, especially eicosapentaenoic acid (EPA). In an effort to reduce costs for large-scale cultivation of this microalga, this study first established a New BBM medium (0.3 x strength BBM with only 3% of the initial phosphate level) to replace the traditional F/2 medium. Phaeodactylum tricornutum could grow in extremely low phosphate concentrations (25 µM), without compromising the EPA content. In the presence of sea salts, silicate addition was not necessary for high rate growth, high EPA content, or lipid accumulation in this species. Using urea as the sole nitrogen source tended to increase EPA contents per dry biomass (by 24.7%) while not affecting growth performance. The use of sea salts, rather than just sodium chloride, led to significantly improved biomass yields (20% increase) and EPA contents of total fatty acid (46-52% increase), most likely because it supplied sufficient essential elements such as magnesium. A salinity level of 35 led to significantly higher biomass yields compared with 20, but salinity had no significant influence on EPA content. EPA became the dominant fatty acid with average levels of 51.8% of total fatty acids during the exponential growth phase at 20 ppt in New BBM medium with sea salts.


Asunto(s)
Diatomeas , Ácidos Grasos Omega-3 , Medios de Cultivo , Ácido Eicosapentaenoico , Ácidos Grasos
6.
Saudi Pharm J ; 28(12): 1834-1841, 2020 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-33424272

RESUMEN

In recent decades, marine microorganisms have become known for their ability to produce a wide variety of secondary bioactive metabolites. Several compounds have been isolated from marine microorganisms for the development of novel bioactives for the food and pharmaceutical industries. In this study, a number of microalgae were evaluated for their antimicrobial activity against gram-positive and gram-negative bacteria, including food and plant pathogens, using various extraction techniques and antimicrobial assays. Disc diffusion and spot-on-lawn assays were conducted to confirm the antimicrobial activity. To measure the potency of the extracts, minimum inhibition concentrations (MIultCs) were measured. Three microalgae, namely Isochrysis galbana, Scenedesmus sp. NT8c, and Chlorella sp. FN1, showed strong inhibitory activity preferentially against gram-positive bacteria. These microalgal species were then selected for further purification and analysis, leading to compound identification. By using a mixture of different chromatography techniques gas chromatography-mass spectrometry (GC-MS) and high-performance liquid chromatography (HPLC) and ultra-high performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UHPLC-Q-TOF-MS), we were able to separate and identify the dominant compounds that are responsible for the inhibitory activity. Additionally, nuclear magnetic resonance (NMR) was used to confirm the presence of these compounds. The dominant compounds that were identified and purified in the extracts are linoleic acid, oleic acid, docosahexaenoic acid (DHA) and eicosapentaenoic acid (EPA). These compounds are the potential candidates that inhibit the growth of gram-positive bacteria. This indicates the potential use of microalgae and their antimicrobial compounds as biocontrol agents against food and plant pathogens.

7.
Int J Mol Sci ; 20(13)2019 Jun 29.
Artículo en Inglés | MEDLINE | ID: mdl-31261879

RESUMEN

Reactive oxygen species (ROS) are highly controlled signaling species that are involved in regulating gene expression in response to different environmental cues. The production of heat shock proteins (HSPs) is a key strategy that plants use to defend themselves against diverse stresses, including oxidative stress. In this study, expression patterns of the Arabidopsis HSP17.4CI gene, a cytosolic class I small HSP, were systematically profiled under different abiotic, biotic and oxidative stresses. Our data show that HSP17.4CI was early and highly induced by heat, cold, salt, drought and high-light. HSP17.4CI also showed high expression levels in Arabidopsis plants infected with the biotrophic pathogen Pseudomonas syringae, but not in response to the necrotrophic pathogens Alternaria brassicicola and Fusarium oxysporum. Oxidative stress treatments including H2O2 and the herbicide methyl viologen led to induction of HSP17.4CI. The plant hormones abscisic acid (ABA) and salicylic acid (SA) induced the expression of HSP17.4CI, whereas methyl jasmonate (MJ) did not affect the expression level of this gene. Furthermore, we found enhanced expression of HSP17.4CI in catalase mutant plants, which are deficient in catalase 2 activity and accumulate intracellular H2O2. Taken together, data presented here suggest that HSP17.4CI expression is regulated by various signals that connect biotic and abiotic stresses with ROS and can be used as a molecular marker for oxidative stress.


Asunto(s)
Proteínas de Arabidopsis/genética , Regulación de la Expresión Génica de las Plantas , Proteínas de Choque Térmico/genética , Estrés Oxidativo , Ácido Abscísico/metabolismo , Arabidopsis/genética , Arabidopsis/metabolismo , Arabidopsis/microbiología , Proteínas de Arabidopsis/metabolismo , Resistencia a la Enfermedad , Fusarium/patogenicidad , Proteínas de Choque Térmico/metabolismo , Pseudomonas syringae/patogenicidad , Especies Reactivas de Oxígeno/metabolismo , Ácido Salicílico/metabolismo
8.
J Environ Manage ; 241: 243-250, 2019 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-31005725

RESUMEN

Sustainability assessments have revealed that integration of CO2 from coal-fired flue gas with microalgae cultivation systems could reduce greenhouse gas emissions. The technical goal of this integration is to utilize exhaust from coal power plants to enhance microalgae cultivation processes by capturing and recycling of carbon dioxide from a more toxic to a less toxic form. However, heavy metals are also introduced along with CO2 to the cultivation system which could contaminate biomass and have deleterious effects on products derived from such systems. The present study aimed at shedding some light on capability of microalgae to sustain their diversity and propagate them under different CO2 concentrations from coal-fired flue gas. Mixed microalgal culture was grown in nutrient rich medium and heavy metals (Al, Cu, Fe, Mn and Zn) are expected to be introduced from flue gas. Three concentrations (1%, 3% and 5.5%) of CO2 were evaluated (reference concentrations from flue gas). Comparative studies were carried out by flue gas and control systems in photobioreactors. Under the 3% CO2 (30% flue gas), the highest fraction of B, Mn and Zn were found to be internalized by the cells (46.8 ±9.45 gL-1, 253.66 ± 40.62 gL-1 and 355.5 ±50.69 gL-1 respectively) during their cultivation period into biomass. Hence, microalgae may offer solution to two major challenges: providing potential biofuel feedstock for energy security and reducing heavy metal pollution to the air.


Asunto(s)
Metales Pesados , Microalgas , Biodegradación Ambiental , Dióxido de Carbono , Carbón Mineral
9.
Mol Plant Microbe Interact ; 28(9): 1049-58, 2015 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-26035128

RESUMEN

Jasmonic acid (JA) is an essential hormone in plant development and defense responses in Arabidopsis thaliana. Exogenous treatment with JA has recently been shown to alter root exudate profiles and the composition of root-associated bacterial communities. However, it is currently unknown whether disruptions of the JA in the rhizosphere affect root exudation profiles and the relative abundance of bacteria and archaea in the rhizosphere. In the present study, two Arabidopsis mutants that are disrupted in different branches of the jasmonate pathway, namely myc2 and med25, were cultivated in nutrient solution and soil to profile root exudates and bacterial and archaeal communities, respectively. Compared with the wild type, both mutants showed distinct exudation patterns, including lower amounts of asparagine, ornithine, and tryptophan, as well as distinct bacterial and archaeal community composition, as illustrated by an increased abundance of Streptomyces, Bacillus, and Lysinibacillus taxa in the med25 rhizosphere and an Enterobacteriaceae population in myc2. Alternatively, the Clostridiales population was less abundant in the rhizosphere of both mutants. Similarities between plant genotypes were highly correlated, as determined by operational taxonomic units in the rhizosphere and metabolites in root exudates. This strongly suggests that root exudates play a major role in modulating changes in microbial community composition upon plant defense responses.


Asunto(s)
Arabidopsis/fisiología , Ciclopentanos/metabolismo , Oxilipinas/metabolismo , Exudados de Plantas/fisiología , Raíces de Plantas/metabolismo , Raíces de Plantas/microbiología , Transducción de Señal/fisiología , Consorcios Microbianos , Microbiología del Suelo
10.
Biotechnol Bioeng ; 112(6): 1243-9, 2015 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-25708183

RESUMEN

Omega-3 fatty acids, such as eicosapentaenoic acid (EPA), provide substantial health benefits. As global fish stocks are declining and in some cases are contaminated with heavy metals, there is a need to find more sustainable land-based sources of these essential fatty acids. The oleaginous microalga Nannochloropsis sp. has been identified as a highly efficient producer of omega-3 fatty acids. In this study, we present a new process to rapidly induce biosynthesis of essential fatty acids, including EPA in Nannochloropsis sp. BR2. Short exposure to UV-C at a dose of 100 or 250 mJ/cm(2) led to a significant increase in total cellular lipid contents when compared to mock-treated controls. A low dosage of 100 mJ/cm(2) also led to a twofold increase in total EPA content within 24 h that constituted 30% of total fatty acids and up to 12% of total dry weight at higher dosages. UV-C radiation may find uses as an easily applicable external inducer for large-scale production of omega-3 production from microalgae.


Asunto(s)
Vías Biosintéticas/efectos de la radiación , Ácidos Grasos Omega-3/biosíntesis , Estramenopilos/metabolismo , Estramenopilos/efectos de la radiación , Rayos Ultravioleta , Factores de Tiempo
11.
Biotechnol Bioeng ; 112(10): 2106-14, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-25899651

RESUMEN

Microalgae are primary producers of organic pigments carotenoids in aquatic environments. However, commercial-scale microalgae application for high value carotenoids production is rarely economical due to the cost-effectiveness of carotenoid induction and microalgal harvesting process. Here, we present a novel approach, using a small dose of externally applied UV-C radiation, to rapidly induce unsaturated fatty acids and carotenoid biosynthesis in Dunaliella salina and Haematococcus pluvialis, and also to significantly promote their swimming cells settling for primary dewatering. The amount of total carotenoids and ß-carotenoid were doubled in 24 h on D. salina upon 50 mJ/cm(2) of UV-C radiation, whereas the astaxanthin yield of H. pluvialis was increased five times in 48 h at 30 mJ/cm(2) . Meanwhile, 95% of algal cells of D. salina and H. pluvialis settled in 15 h and 2 h, respectively. This novel technique represents a convenient, time-saving and cost-effective method for commercial microalgal carotenoids production.


Asunto(s)
Carotenoides/biosíntesis , Pigmentos Biológicos/biosíntesis , Rayos Ultravioleta , Volvocida/metabolismo , Volvocida/efectos de la radiación , Carotenoides/aislamiento & purificación , Pigmentos Biológicos/aislamiento & purificación , Factores de Tiempo
12.
Appl Microbiol Biotechnol ; 99(22): 9407-16, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26201492

RESUMEN

Carotenoids prevent different degenerative diseases and improve human health. Microalgae are commercially exploited for carotenoids, including astaxanthin and ß-carotene. Two commercially important microalgae, Dunaliella salina and Tetraselmis suecica, were treated with plant hormones salicylic acid (SA) and methyl jasmonate (MJ), or by UV-C radiation (T. suecica only) and a combination thereof. Significant increases in total carotenoids were found for D. salina and T. suecica after treatment with MJ (10 µmol/L) and SA (70-250 µmol/L), respectively. T. suecica also had significant increases in total carotenoids following UV-C radiation compared to control cultures. Among the carotenoids, lutein was the highest induced carotenoid. A combination of these two treatments also showed a significant increase in total carotenoids and lutein for T. suecica, when compared to controls. Plant hormones and UV-C radiation may be useful tools for increasing carotenoid accumulation in green microalgae although the responses are species- and dose-specific and should be trialed in medium to large scale to explore commercial production.


Asunto(s)
Carotenoides/biosíntesis , Chlorophyta/metabolismo , Microalgas/metabolismo , Microbiología del Agua , Acetatos/farmacología , Antiinfecciosos/farmacología , Carotenoides/química , Chlorophyta/química , Chlorophyta/efectos de los fármacos , Chlorophyta/efectos de la radiación , Ciclopentanos/farmacología , Luteína/biosíntesis , Microalgas/efectos de los fármacos , Microalgas/genética , Microalgas/efectos de la radiación , Oxilipinas/farmacología , Reguladores del Crecimiento de las Plantas/farmacología , Ácido Salicílico/farmacología , Rayos Ultravioleta , Xantófilas/biosíntesis , beta Caroteno/biosíntesis
13.
Plant Biotechnol J ; 12(8): 1044-52, 2014 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-24944109

RESUMEN

Polyhydroxyalkanoates (PHAs) are bacterial carbon storage polymers used as renewable, biodegradable plastics. PHA production in plants may be a way to reduce industrial PHA production costs. We recently demonstrated a promising level of peroxisomal PHA production in the high biomass crop species sugarcane. However, further production strategies are needed to boost PHA accumulation closer to commercial targets. Through exogenous fatty acid feeding of Arabidopsis thaliana plants that contain peroxisome-targeted PhaA, PhaB and PhaC enzymes from Cupriavidus necator, we show here that the availability of substrates derived from the ß-oxidation cycle limits peroxisomal polyhydroxybutyrate (PHB) biosynthesis. Knockdown of peroxisomal citrate synthase activity using artificial microRNA increased PHB production levels approximately threefold. This work demonstrates that reduction of peroxisomal citrate synthase activity may be a valid metabolic engineering strategy for increasing PHA production in other plant species.


Asunto(s)
Arabidopsis/enzimología , Citrato (si)-Sintasa/genética , Peroxisomas/enzimología , Polihidroxialcanoatos/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Vías Biosintéticas , Citrato (si)-Sintasa/metabolismo , Ácidos Grasos/metabolismo , Técnicas de Silenciamiento del Gen , Ingeniería Metabólica , Oxidación-Reducción , Plantas Modificadas Genéticamente , Especificidad por Sustrato
14.
Microb Cell Fact ; 13: 14, 2014 Jan 24.
Artículo en Inglés | MEDLINE | ID: mdl-24456581

RESUMEN

Microalgae cells have the potential to rapidly accumulate lipids, such as triacylglycerides that contain fatty acids important for high value fatty acids (e.g., EPA and DHA) and/or biodiesel production. However, lipid extraction methods for microalgae cells are not well established, and there is currently no standard extraction method for the determination of the fatty acid content of microalgae. This has caused a few problems in microlagal biofuel research due to the bias derived from different extraction methods. Therefore, this study used several extraction methods for fatty acid analysis on marine microalga Tetraselmis sp. M8, aiming to assess the potential impact of different extractions on current microalgal lipid research. These methods included classical Bligh & Dyer lipid extraction, two other chemical extractions using different solvents and sonication, direct saponification and supercritical CO2 extraction. Soxhlet-based extraction was used to weigh out the importance of solvent polarity in the algal oil extraction. Coupled with GC/MS, a Thermogravimetric Analyser was used to improve the quantification of microalgal lipid extractions. Among these extractions, significant differences were observed in both, extract yield and fatty acid composition. The supercritical extraction technique stood out most for effective extraction of microalgal lipids, especially for long chain unsaturated fatty acids. The results highlight the necessity for comparative analyses of microalgae fatty acids and careful choice and validation of analytical methodology in microalgal lipid research.


Asunto(s)
Lípidos/aislamiento & purificación , Extracción Líquido-Líquido/métodos , Microalgas/metabolismo , Biocombustibles , Biomasa , Ácidos Grasos/análisis , Ácidos Grasos/química , Ácidos Grasos/aislamiento & purificación , Cromatografía de Gases y Espectrometría de Masas , Lípidos/análisis , Lípidos/química , Solventes/química , Sonicación , Triglicéridos/análisis , Triglicéridos/química , Triglicéridos/aislamiento & purificación
15.
Mar Drugs ; 12(6): 3381-98, 2014 Jun 04.
Artículo en Inglés | MEDLINE | ID: mdl-24901700

RESUMEN

With the depletion of global fish stocks, caused by high demand and effective fishing techniques, alternative sources for long chain omega-3 fatty acids are required for human nutrition and aquaculture feeds. Recent research has focused on land-based cultivation of microalgae, the primary producers of omega-3 fatty acids in the marine food web. The effect of salinity on fatty acids and related gene expression was studied in the model marine microalga, Tetraselmis sp. M8. Correlations were found for specific fatty acid biosynthesis and gene expression according to salinity and the growth phase. Low salinity was found to increase the conversion of C18:4 stearidonic acid (SDA) to C20:4 eicosatetraenoic acid (ETA), correlating with increased transcript abundance of the Δ-6-elongase-encoding gene in salinities of 5 and 10 ppt compared to higher salinity levels. The expression of the gene encoding ß-ketoacyl-coenzyme was also found to increase at lower salinities during the nutrient deprivation phase (Day 4), but decreased with further nutrient stress. Nutrient deprivation also triggered fatty acids synthesis at all salinities, and C20:5 eicosapentaenoic acid (EPA) increased relative to total fatty acids, with nutrient starvation achieving a maximum of 7% EPA at Day 6 at a salinity of 40 ppt.


Asunto(s)
Chlorophyta/metabolismo , Ácidos Grasos/biosíntesis , Regulación de la Expresión Génica , Chlorophyta/genética , Ácido Eicosapentaenoico/biosíntesis , Microalgas/genética , Microalgas/metabolismo , Salinidad , Factores de Tiempo
16.
Trends Plant Sci ; 29(4): 482-494, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-37977879

RESUMEN

Plant microbiomes play a vital role in promoting plant growth and resilience to cope with environmental stresses. Plant microbiome engineering holds significant promise to increase crop yields, but there is uncertainty about how this can best be achieved. We propose a step-by-step approach involving customized direct and indirect methods to condition soils and to match plants and microbiomes. Although three approaches, namely the development of (i) 'plant- and microbe-friendly' soils, (ii) 'microbe-friendly' plants, and (iii) 'plant-friendly' microbiomes, have been successfully tested in isolation, we propose that the combination of all three may lead to a step-change towards higher and more stable crop yields. This review aims to provide knowledge, future directions, and practical guidance to achieve this goal via customized plant microbiome engineering.


Asunto(s)
Microbiota , Rizosfera , Microbiología del Suelo , Plantas/genética , Suelo , Seguridad Alimentaria , Raíces de Plantas
17.
Front Bioeng Biotechnol ; 12: 1379301, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38646010

RESUMEN

The increase in global population and industrial development has led to a significant release of organic and inorganic pollutants into water streams, threatening human health and ecosystems. Microalgae, encompassing eukaryotic protists and prokaryotic cyanobacteria, have emerged as a sustainable and cost-effective solution for removing these pollutants and mitigating carbon emissions. Various microalgae species, such as C. vulgaris, P. tricornutum, N. oceanica, A. platensis, and C. reinhardtii, have demonstrated their ability to eliminate heavy metals, salinity, plastics, and pesticides. Synthetic biology holds the potential to enhance microalgae-based technologies by broadening the scope of treatment targets and improving pollutant removal rates. This review provides an overview of the recent advances in the synthetic biology of microalgae, focusing on genetic engineering tools to facilitate the removal of inorganic (heavy metals and salinity) and organic (pesticides and plastics) compounds. The development of these tools is crucial for enhancing pollutant removal mechanisms through gene expression manipulation, DNA introduction into cells, and the generation of mutants with altered phenotypes. Additionally, the review discusses the principles of synthetic biology tools, emphasizing the significance of genetic engineering in targeting specific metabolic pathways and creating phenotypic changes. It also explores the use of precise engineering tools, such as CRISPR/Cas9 and TALENs, to adapt genetic engineering to various microalgae species. The review concludes that there is much potential for synthetic biology based approaches for pollutant removal using microalgae, but there is a need for expansion of the tools involved, including the development of universal cloning toolkits for the efficient and rapid assembly of mutants and transgenic expression strains, and the need for adaptation of genetic engineering tools to a wider range of microalgae species.

18.
Semin Cell Dev Biol ; 22(7): 741-8, 2011 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-21803167

RESUMEN

Since its original discovery in yeast, the Mediator complex has been identified in a wide range of organisms across the eukaryotic kingdom. Despite being experimentally purified from a number of fungal and metazoan organisms, it was not until 2007, thirteen years after its initial discovery, that the Mediator complex was successfully isolated from plants. With a number of papers now beginning to emerge on the plant Mediator complex, this review aims to provide an overview of the diverse functions that have been identified for individual plant Mediator subunits. In addition to demonstrating roles in plant development, flowering, hormone signaling and biotic and abiotic stress tolerance; recent findings have revealed novel functions for plant Mediator subunits, including mRNA, miRNA and rRNA processing, as well as controlling DNA and protein stability. These diverse activities have expanded the known functions of the Mediator complex and demonstrate a variety of new insights that have been gained from investigations into the plant Mediator complex. Future directions for research into this multi-functional protein complex will be discussed.


Asunto(s)
Complejo Mediador/genética , Complejo Mediador/metabolismo , Plantas/genética , Plantas/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Proteínas de Unión al ADN , Flores/metabolismo , Proteínas Nucleares/genética , Proteínas Nucleares/metabolismo , Desarrollo de la Planta , Procesamiento Postranscripcional del ARN , ARN no Traducido/biosíntesis , Transducción de Señal , Estrés Fisiológico , Transcripción Genética
19.
Plant Physiol ; 160(1): 541-55, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22822211

RESUMEN

The PHYTOCHROME AND FLOWERING TIME1 gene encoding the MEDIATOR25 (MED25) subunit of the eukaryotic Mediator complex is a positive regulator of jasmonate (JA)-responsive gene expression in Arabidopsis (Arabidopsis thaliana). Based on the function of the Mediator complex as a bridge between DNA-bound transcriptional activators and the RNA polymerase II complex, MED25 has been hypothesized to function in association with transcriptional regulators of the JA pathway. However, it is currently not known mechanistically how MED25 functions to regulate JA-responsive gene expression. In this study, we show that MED25 physically interacts with several key transcriptional regulators of the JA signaling pathway, including the APETALA2 (AP2)/ETHYLENE RESPONSE FACTOR (ERF) transcription factors OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF59 and ERF1 as well as the master regulator MYC2. Physical interaction detected between MED25 and four group IX AP2/ERF transcription factors was shown to require the activator interaction domain of MED25 as well as the recently discovered Conserved Motif IX-1/EDLL transcription activation motif of MED25-interacting AP2/ERFs. Using transcriptional activation experiments, we also show that OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF59- and ERF1-dependent activation of PLANT DEFENSIN1.2 as well as MYC2-dependent activation of VEGETATIVE STORAGE PROTEIN1 requires a functional MED25. In addition, MED25 is required for MYC2-dependent repression of pathogen defense genes. These results suggest an important role for MED25 as an integrative hub within the Mediator complex during the regulation of JA-associated gene expression.


Asunto(s)
Acetatos/farmacología , Proteínas de Arabidopsis/metabolismo , Arabidopsis/genética , Ciclopentanos/farmacología , Regulación de la Expresión Génica de las Plantas , Proteínas Nucleares/metabolismo , Oxilipinas/farmacología , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Arabidopsis/efectos de los fármacos , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Factores de Transcripción Básicos con Cremalleras de Leucinas y Motivos Hélice-Asa-Hélice/genética , Factores de Transcripción Básicos con Cremalleras de Leucinas y Motivos Hélice-Asa-Hélice/metabolismo , Secuencia Conservada , Proteínas de Unión al ADN , Genes de Plantas , Proteínas de Homeodominio/genética , Proteínas de Homeodominio/metabolismo , Datos de Secuencia Molecular , Proteínas Nucleares/genética , Unión Proteica , Mapeo de Interacción de Proteínas , Receptores de Superficie Celular/genética , Receptores de Superficie Celular/metabolismo , Transducción de Señal , Factores de Transcripción/genética , Factores de Transcripción/metabolismo , Activación Transcripcional , Técnicas del Sistema de Dos Híbridos
20.
Microb Cell Fact ; 11: 96, 2012 Jul 25.
Artículo en Inglés | MEDLINE | ID: mdl-22830315

RESUMEN

Omega-3 fatty acids eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) provide significant health benefits and this has led to an increased consumption as dietary supplements. Omega-3 fatty acids EPA and DHA are found in animals, transgenic plants, fungi and many microorganisms but are typically extracted from fatty fish, putting additional pressures on global fish stocks. As primary producers, many marine microalgae are rich in EPA (C20:5) and DHA (C22:6) and present a promising source of omega-3 fatty acids. Several heterotrophic microalgae have been used as biofactories for omega-3 fatty acids commercially, but a strong interest in autotrophic microalgae has emerged in recent years as microalgae are being developed as biofuel crops. This paper provides an overview of microalgal biotechnology and production platforms for the development of omega-3 fatty acids EPA and DHA. It refers to implications in current biotechnological uses of microalgae as aquaculture feed and future biofuel crops and explores potential applications of metabolic engineering and selective breeding to accumulate large amounts of omega-3 fatty acids in autotrophic microalgae.


Asunto(s)
Ácidos Grasos Omega-3/biosíntesis , Microalgas/metabolismo , Animales , Organismos Acuáticos/metabolismo , Suplementos Dietéticos/análisis , Cadena Alimentaria , Humanos , Ingeniería Metabólica , Microalgas/genética
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