Lead optimization of purine based orally bioavailable Mps1 (TTK) inhibitors.

Efforts to optimize biological activity, novelty, selectivity and oral bioavailability of Mps1 inhibitors, from a purine based lead MPI-0479605, are described in this Letter. Mps1 biochemical activity and cytotoxicity in HCT-116 cell line were improved. On-target activity confirmation via mechanism based G2/M escape assay was demonstrated. Physico-chemical and ADME properties were optimized to improve oral bioavailability in mouse.

Rapidly reversible hydrophobization: an approach to high first-pass drug extraction.

We have investigated a rapidly reversible hydrophobization of therapeutic agents for improving first-pass uptake in locoregional drug therapy. This approach involves the attachment of a hydrophobic moiety to the drug by highly labile chemical linkages that rapidly hydrolyze upon injection. Hydrophobization drastically enhances cell-membrane association of the prodrug and, consequently, drug uptake, while the rapid lability protects nontargeted tissues from exposure to the highly active agent. Using the membrane-impermeable DNA intercalator propidium iodide, and melphalan, we report results from in vitro cellular internalization and toxicity studies. Additionally, we report in vivo results after a single liver arterial bolus injection, demonstrating both tumor targeting and increased survival in a mouse tumor model.

Donor-Acceptor Supramolecular Organic Nanofibers as Visible-Light Photoelectrocatalysts for Hydrogen Production.

Perylene tetracarboxylic diimide (PTCDI) derivatives have been extensively studied for one-dimensional (1D) self-assembled systems and for applications in photocatalysis. Herein, we constructed a PTCDI-based donor-acceptor (D-A) supramolecular system via in situ self-assembly on an indium tin oxide conductive glass surface. The self-assembled PTCDI nanostructures exhibit well-defined nanofibril morphologies and strong photocurrents. Interestingly, a strong and reversible electrochromic color change was observed during cyclic voltammetry. The color of the nanofibers changed from red to blue and then to violet as the reduction progressed to the radical anion and then to the dianion. This series of one-electron reductions was confirmed by UV absorption, electron paramagnetic resonance spectroscopy, and hydrazine reduction. Most importantly, these PTCDI nanofibers exhibit efficient photoelectrocatalytic hydrogen production with remarkable stability under xenon lamp illumination (λ ≥ 420 nm). Among the three nanofibers prepared, the fibers assembled from PTCDI molecule 2 were found to be the most effective catalyst with 30% Faradaic efficiency. In addition, the nanofibers produced hydrogen at a steady-state for more than 8 h and produced repeatable results in 3 consecutive testing cycles, giving them great potential for practical industrial applications. Under an applied bias voltage, the 1D intermolecular stacking along the long axis of the nanofibers affords efficient separation and migration of photogenerated charge carriers, which play a crucial role in the photoelectrocatalytic process. As a proof-of-concept, the D-A-structured PTCDI nanofibers presented herein may guide future research on photoelectrocatalysis based on self-assembled supramolecular systems by providing more options for material design of the catalysts to achieve greater efficiencies.

Thermoactivated Electrical Conductivity in Perylene Diimide Nanofiber Materials.

Thermoactivated electrical conductivity has been studied on nanofibers fabricated from the derivatives of perylene tetracarboxylic diimide (PTCDI) both in the dark and under visible light illumination. The activation energy obtained for the nanofibers fabricated from donor-acceptor (D-A) PTCDIs are higher than that for symmetric n-dodecyl substituted PTCDI. Such difference originates from the strong dependence of thermoactivated charge hopping on material disorder, which herein is dominated by the D-A charge-transfer and dipole-dipole interactions between stacked molecules. When the nanofibers were heated above the first phase transition temperature (around 85 °C), the activation energy was significantly increased because of the thermally enhanced polaronic effect. Moreover, charge carrier density can be increased in the D-A nanofibers under visible light illumination. Consistent with the theoretical models in the literature, the increased charge carrier density did cause decrease in the activation energy due to the up-shifting of Fermi level closer to the conduction band edge.

Chemical Self-Doping of Organic Nanoribbons for High Conductivity and Potential Application as Chemiresistive Sensor.

Intrinsically low electrical conductivity of organic semiconductors hinders their further development into practical electronic devices. Herein, we report on an efficient chemical self-doping to increase the conductivity through one-dimensional stacking arrangement of electron donor-acceptor (D-A) molecules. The D-A molecule employed was a 1-methylpiperidine-substituted perylene tetracarboxylic diimide (MP-PTCDI), of which the methylpiperidine moiety is a strong electron donor, and can form a charge transfer complex with PTCDI (acting as the acceptor), generating anionic radical of PTCDI as evidenced in molecular solutions. Upon self-assembling into nanoribbons through columnar π-π stacking, the intermolecular charge transfer interaction between methylpiperidine and PTCDI would be enhanced, and the electrons generated are delocalized along the π-π stacking of PTCDIs, leading to enhancement in conductivity. The conductive fiber materials thus produced can potentially be used as chemiresistive sensor for vapor detection of electron deficient chemicals such as hydrogen peroxide, taking advantage of the large surface area of nanofibers. As a major component of improvised explosives, hydrogen peroxide remains a critical signature chemical for public safety screening and monitoring.

Discovery and SAR of methylated tetrahydropyranyl derivatives as inhibitors of isoprenylcysteine carboxyl methyltransferase (ICMT).

A series of tetrahydropyranyl (THP) derivatives has been developed as potent inhibitors of isoprenylcysteine carboxyl methyltransferase (ICMT) for use as anticancer agents. Structural modification of the submicromolar hit compound 3 led to the potent 3-methoxy substituted analogue 27. Further SAR development around the THP ring resulted in an additional 10-fold increase in potency, exemplified by analogue 75 with an IC(50) of 1.3 nM. Active and potent compounds demonstrated a dose-dependent increase in Ras cytosolic protein. Potent ICMT inhibitors also reduced cell viability in several cancer cell lines with growth inhibition (GI(50)) values ranging from 0.3 to >100 µM. However, none of the cellular effects observed using ICMT inhibitors were as pronounced as those resulting from a farnesyltransferase inhibitor.

Analogues of 4-[(7-Bromo-2-methyl-4-oxo-3H-quinazolin-6-yl)methylprop-2-ynylamino]-N-(3-pyridylmethyl)benzamide (CB-30865) as potent inhibitors of nicotinamide phosphoribosyltransferase (Nampt).

We have shown previously that the target of the potent cytotoxic agent 4-[(7-bromo-2-methyl-4-oxo-3H-quinazolin-6-yl)methyl-prop-2-ynylamino]-N-(3-pyridylmethyl)benzamide (CB38065, 1) is nicotinamide phosphoribosyltransferase (Nampt). With its cellular target known we sought to optimize the biochemical and cellular Nampt activity of 1 as well as its cytotoxicity. It was found that a 3-pyridylmethylamide substituent in the A region was critical to cellular Nampt activity and cytotoxicity, although other aromatic substitution did yield compounds with submicromolar enzymatic inhibition. Small unsaturated groups worked best in the D-region of the molecule, with 3,3-dimethylallyl providing optimal potency. The E region required a quinazolin-4-one or 1,2,3-benzotriazin-4-one group for activity, and many substituents were tolerated at C² of the quinazolin-4-one. The best compounds showed subnanomolar inhibition of Nampt and low nanomolar cytotoxicity in cellular assays.

Entrapment and condensation of DNA in neutral reverse micelles.

DNA condensation and compaction is induced by a variety of condensing agents such as polycations. The present study analyzed the structure of plasmid DNA (DNA) in the small inner space of reverse micelles formed from nonionic surfactants (isotropic phase). Spectroscopic studies indicated that DNA was dissolved in an organic solvent in the presence of a neutral detergent. Fluorescent quenching of ethidium bromide and of rhodamine covalently attached to DNA suggested that the DNA within neutral, reverse micelles was condensed. Circular dichroism indicated that the DNA structure was C form (member of B family) and not the dehydrated A form. Concordantly, NMR experiments indicated that the reverse micelles contained a pool of free water, even at a ratio of water to surfactant (Wo) of 3.75. Electron microscopic analysis also indicated that the DNA was in a ring-like structure, probably toroids. Atomic force microscopic images also revealed small, compact particles after the condensed DNA structures were preserved using an innovative cross-linking strategy. In the lamellar phase, the DNA was configured in long strands that were 20 nm in diameter. Interestingly, such DNA structures, reminiscent of "nanowires," have apparently not been previously observed.

Efficient in vitro and in vivo expression of covalently modified plasmid DNA.

The tracking of plasmid DNA (pDNA) movement within cells requires the attachment of labels to the DNA in a manner such that: (a) the pDNA remains intact during the labeling process and (b) the labels remain stably attached to the DNA. Keeping these two criteria in mind, we have recently developed a series of alkylating reagents that facilitate the one-step, covalent attachment of compounds directly onto nucleic acids in a nondestructive manner. Using these DNA-alkylating reagents, we have attached a wide range of both fluorescent and nonfluorescent reporter molecules onto pDNAs. We now show that even with the covalent attachment of various marker compounds, the pDNA remains expression competent. The ability to create labeled, expression-competent DNA allows for the simultaneous tracking of both pDNA location and reporter gene expression within living or fixed cells.