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1.
Zhongguo Yi Liao Qi Xie Za Zhi ; 47(6): 638-644, 2023 Nov 30.
Artículo en Zh | MEDLINE | ID: mdl-38086721

RESUMEN

Vascular interventional surgery is an important means to treat cardiovascular and cerebrovascular diseases, but the particularity of its working environment will bring greater radiation threat to doctors. Vascular interventional surgery robots can effectively improve the working environment of doctors and can provide more stable operations, improve the success rate of surgery. This study mainly introduces the current research status, key technologies, and future application of vascular interventional surgical robots.


Asunto(s)
Robótica , Procedimientos Quirúrgicos Vasculares/métodos , Corazón , Tecnología
2.
Zhongguo Yi Liao Qi Xie Za Zhi ; 47(6): 591-597, 2023 Nov 30.
Artículo en Zh | MEDLINE | ID: mdl-38086712

RESUMEN

Robotic puncture system has been widely used in modern minimally invasive surgery, which usually uses hand-eye calibration to calculate the spatial relationship between the robot and the optical tracking system. However, the hand-eye calibration process is time-consuming and sensitive to environmental changes, which makes it difficult to guarantee the puncture accuracy of the robot. This study proposes an uncalibrated positioning method for puncture robot based on optical navigation. The method divides the target path positioning into two stages, angle positioning and position positioning, and designs angle image features and position image features respectively. The corresponding image Jacobian matrix is constructed based on the image features and updated by online estimation with a cubature Kalman filter to drive the robot to perform target path localization. The target path positioning results show that the method is more accurate than the traditional hand-eye calibration method and saves significant preoperative preparation time by eliminating the need for calibration.


Asunto(s)
Dispositivos Ópticos , Procedimientos Quirúrgicos Robotizados , Robótica , Calibración , Procedimientos Quirúrgicos Mínimamente Invasivos
3.
Zhongguo Yi Liao Qi Xie Za Zhi ; 46(5): 509-513, 2022 Sep 30.
Artículo en Zh | MEDLINE | ID: mdl-36254477

RESUMEN

The precision of optical positioning system is one of the most important factors which affects the precision of navigation guided surgery. In this study, an efficient and low-cost tool and its algorithm were proposed to evaluate the accuracy of optical positioning system based on the ablation scenario of liver cancer, and two validation experiments were designed. Experimental results show that the tool and its algorithm can evaluate the accuracy of the current positioning system accurately and efficiently.


Asunto(s)
Neoplasias Hepáticas , Dispositivos Ópticos , Cirugía Asistida por Computador , Algoritmos , Humanos , Neoplasias Hepáticas/cirugía , Cirugía Asistida por Computador/métodos
4.
Zhongguo Yi Liao Qi Xie Za Zhi ; 45(3): 246-249, 2021 Jun 08.
Artículo en Zh | MEDLINE | ID: mdl-34096229

RESUMEN

In neurosurgery, skull repair caused by surgical approach is one of the important research contents. In this paper, a rapid reconstruction method of the skull defect with optical navigation system is proposed. This method can automatically reconstruct the structure of skull defect with the intraoperative defect edge points and preoperative medical image data. The head model experiment was used to evaluate the effect of the method, the average error of the reconstruction of the defect in the right orbit was 0.424 mm, while the average error of the reconstruction of the defect in the posterior skull base was 0.377 mm. The experimental results show that the structure of the defect is consistent with the actual defect, and the reconstruction accuracy satisfies the clinical requirements in neurosurgery.


Asunto(s)
Cirugía Asistida por Computador , Craneotomía
5.
J Med Syst ; 44(4): 83, 2020 Mar 09.
Artículo en Inglés | MEDLINE | ID: mdl-32152742

RESUMEN

The distribution of fiducial markers is one of the main factors affected the accuracy of optical navigation system. However, many studies have been focused on improving the fiducial registration accuracy or the target registration accuracy, but few solutions involve optimization model for the distribution of fiducial markers. In this paper, we propose an optimization model for the distribution of fiducial markers to improve the optical navigation accuracy. The strategy of optimization model is reducing the distribution from three dimensional to two dimensional to obtain the 2D optimal distribution by using optimization algorithm in terms of the marker number and the expectation equation of target registration error (TRE), and then extend the 2D optimal distribution in two dimensional to three dimensional to calculate the optimal distribution according to the distance parameter and the expectation equation of TRE. The results of the experiments show that the averaged TRE for the human phantom is approximately 1.00 mm by applying the proposed optimization model, and the averaged TRE for the abdominal phantom is 0.59 mm. The experimental results of liver simulator model and ex-vivo porcine liver model show that the proposed optimization model can be effectively applied in liver intervention.


Asunto(s)
Marcadores Fiduciales/normas , Hígado/cirugía , Cirugía Asistida por Computador/normas , Algoritmos , Humanos
6.
J Med Syst ; 43(6): 153, 2019 Apr 24.
Artículo en Inglés | MEDLINE | ID: mdl-31020459

RESUMEN

Marker-based optical tracking systems (OTS) are widely used in clinical image-guided therapy. However, the emergence of ghost markers, which is caused by the mistaken recognition of markers and the incorrect correspondences between marker projections, may lead to tracking failures for these systems. Therefore, this paper proposes a strategy to prevent the emergence of ghost markers by identifying markers based on the features of their projections, finding the correspondences between marker projections based on the geometric information provided by markers, and fast-tracking markers in a 2D image between frames based on the sizes of their projections. Apart from validating its high robustness, the experimental results show that the proposed strategy can accurately recognize markers, correctly identify their correspondences, and meet the requirements of real-time tracking.


Asunto(s)
Dispositivos Ópticos , Cirugía Asistida por Computador/métodos , Algoritmos , Humanos
7.
Ren Fail ; 40(1): 671-679, 2018 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-30741617

RESUMEN

BACKGROUND: Anemia is extremely common among dialysis patients and underlies some of the symptoms associated with reduced kidney function, including fatigue, depression, reduced exercise tolerance, and dyspnea. OBJECTIVES: A clearer cognition of the prognosistic impact of hemoglobin (Hb) or hematocrit (Hct) target for the outcomes of dialysis patients is urgent. This article aims to establish the suitable hemoglobin in order to provide clinical guidance. METHODS: MEDLINE, EmBase, the Cochrane Library and other databases were searched with both MeSH terms and keywords to gather randomized controlled trials that assessed all-cause mortality, cardiovascular events, fistula thrombosis, infectious diseases and transfusion among dialysis-dependent patients using erythropoiesis-stimulating agents. The meta-analysis was accomplished via Revman 5.3 version. FINDINGS: Totally, nine eligible studies were included, with study subjects involving 3228 patients. There was a significantly higher risk of fistula thrombosis without heterogeneity (RR 1.34, 95% CI 1.15-1.55; p < 0.05) in the higher Hb target group than in the lower Hb target group in the fixed effects model. However, no significant difference was found in all-cause mortality in the fixed effects model (RR 1.09, 95% CI 0.93-1.27; p = 0.30), cardiovascular events (RR 0.77, 95% CI 0.31-1.92; p = 0.58), infectious diseases (RR 0.69, 95% CI 0.24-1.96; p = 0.49) and transfusion (RR 0.92, 95% CI 0.42-1.99; p = 0.82) in the random effects model between the higher Hb target group and the lower Hb target group. DISCUSSION: The results favor lower Hb target. To target lower Hb target when treating dialysis patients with anemia may decrease the risk of fistula thrombosis without increasing the risk of death, cardiovascular events, infectious diseases and transfusion.


Asunto(s)
Anemia/tratamiento farmacológico , Hematínicos/normas , Hemoglobinas/análisis , Diálisis Renal/efectos adversos , Insuficiencia Renal Crónica/terapia , Anemia/sangre , Anemia/mortalidad , Hematínicos/uso terapéutico , Hematócrito , Hemoglobinas/normas , Humanos , Guías de Práctica Clínica como Asunto , Ensayos Clínicos Controlados Aleatorios como Asunto , Insuficiencia Renal Crónica/sangre , Insuficiencia Renal Crónica/complicaciones , Insuficiencia Renal Crónica/mortalidad , Resultado del Tratamiento
8.
Zhongguo Yi Liao Qi Xie Za Zhi ; 42(1): 27-30, 2018 Jan 30.
Artículo en Zh | MEDLINE | ID: mdl-29862741

RESUMEN

This paper designed an automatic robotic puncture system for accurate liver cancer ablation based on optical surgical navigation. The near-infrared optical surgical navigation system we constructed for liver ablation was applied to carry out surgical planning and simulation, the near-infrared cameras dynamically tracked the current position of puncture needle relative to the location of the patient's anatomy, then guided the surgery robot to position precisely in three-dimensional space and performed the surgery.


Asunto(s)
Neoplasias Hepáticas/cirugía , Procedimientos Quirúrgicos Robotizados , Humanos , Agujas , Punciones , Cirugía Asistida por Computador
9.
Biomed Eng Online ; 16(1): 39, 2017 Mar 28.
Artículo en Inglés | MEDLINE | ID: mdl-28351368

RESUMEN

BACKGROUND: Dual-source computed tomography (DSCT) is a very effective way for diagnosis and treatment of heart disease. The quantitative information of spatiotemporal DSCT images can be important for the evaluation of cardiac function. To avoid the shortcoming of manual delineation, it is imperative to develop an automatic segmentation technique for 4D cardiac images. METHODS: In this paper, we implement the heart segmentation-propagation framework based on nonrigid registration. The corresponding points of anatomical substructures are extracted by using the extension of n-dimensional scale invariant feature transform method. They are considered as a constraint term of nonrigid registration using the free-form deformation, in order to restrain the large variations and boundary ambiguity between subjects. RESULTS: We validate our method on 15 patients at ten time phases. Atlases are constructed by the training dataset from ten patients. On the remaining data the median overlap is shown to improve significantly compared to original mutual information, in particular from 0.4703 to 0.5015 ([Formula: see text]) for left ventricle myocardium and from 0.6307 to 0.6519 ([Formula: see text]) for right atrium. CONCLUSIONS: The proposed method outperforms standard mutual information of intensity only. The segmentation errors had been significantly reduced at the left ventricle myocardium and the right atrium. The mean surface distance of using our framework is around 1.73 mm for the whole heart.


Asunto(s)
Tomografía Computarizada Cuatridimensional , Corazón/diagnóstico por imagen , Procesamiento de Imagen Asistido por Computador/métodos , Algoritmos , Automatización , Humanos
10.
J Med Syst ; 40(4): 107, 2016 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-26899151

RESUMEN

Surgical navigation systems can help doctors maximize the accuracy of surgeries, minimize operation durations, avoid mistakes, and improve the survival chances of patients. The tracking of device is an important component in surgical navigation systems. However, commercial surgical tracking devices are expensive, thus hindering the development of surgical navigation systems, particularly in developing countries. Therefore, an accurate and low-cost near-infrared optical tracking system is presented in this study for the real-time tracking of surgical tools and for measuring and displaying the positions of these tools relative to lesions and other targets inside a patient's body. A relative algorithm for the registration of surgical tools is also proposed in this paper to yield easy, safe, and precise tracking. Experiments are conducted to test the performance of the system. Results show that the mean square errors of the distances between the light-emitting points on the surgical tools are less than 0.3 mm, with the mean square error of distance between the tip and light-emitting points is less than 0.025 mm and that between two adjacent corner points is 0.2714 mm.


Asunto(s)
Rayos Infrarrojos , Dispositivos Ópticos , Cirugía Asistida por Computador/instrumentación , Instrumentos Quirúrgicos , Algoritmos , Diseño de Equipo , Humanos , Procesamiento de Imagen Asistido por Computador/métodos , Diseño de Software , Cirugía Asistida por Computador/economía , Interfaz Usuario-Computador
11.
J Med Syst ; 40(1): 7, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26573644

RESUMEN

The accuracy of optical tracking systems is important to scientists. With the improvements reported in this regard, such systems have been applied to an increasing number of operations. To enhance the accuracy of these systems further and to reduce the effect of synchronization and visual field errors, this study introduces a field-programmable gate array (FPGA)-based synchronization control method, a method for measuring synchronous errors, and an error distribution map in field of view. Synchronization control maximizes the parallel processing capability of FPGA, and synchronous error measurement can effectively detect the errors caused by synchronization in an optical tracking system. The distribution of positioning errors can be detected in field of view through the aforementioned error distribution map. Therefore, doctors can perform surgeries in areas with few positioning errors, and the accuracy of optical tracking systems is considerably improved. The system is analyzed and validated in this study through experiments that involve the proposed methods, which can eliminate positioning errors attributed to asynchronous cameras and different fields of view.


Asunto(s)
Rayos Infrarrojos , Cirugía Asistida por Computador/instrumentación , Cirugía Asistida por Computador/normas , Humanos
12.
J Med Syst ; 40(3): 67, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26728393

RESUMEN

Near-infrared optical tracking devices, which are important components of surgical navigation systems, need to be calibrated for effective tracking. The calibration results has a direct influence on the tracking accuracy of an entire system. Therefore, the study of calibration techniques is of theoretical significance and practical value. In the present work, a systematic calibration method based on movable plates is established, which analyzes existing calibration theories and implements methods using calibration reference objects. First, the distortion model of near-infrared cameras (NICs) is analyzed in the implementation of this method. Second, the calibration images from different positions and orientations are used to establish the required linear equations. The initial values of the NIC parameters are calculated with the direct linear transformation method. Finally, the accurate internal and external parameters of the NICs are obtained by conducting nonlinear optimization. Analysis results show that the relative errors of the left and right NICs in the tracking system are 0.244 and 0.282 % for the focal lengths and 0.735 and 1.111 % for the principal points, respectively. The image residuals of the left and right image sets are both less than 0.01 pixel. The standard error of the calibration result is lower than 1, and the measurement error of the tracking system is less than 0.3 mm. The experimental data show that the proposed method of calibrating NICs is effective and can generate favorable calibration results.


Asunto(s)
Algoritmos , Procesamiento de Imagen Asistido por Computador/instrumentación , Procesamiento de Imagen Asistido por Computador/normas , Rayos Infrarrojos , Procedimientos Quirúrgicos Oftalmológicos/instrumentación , Calibración , Diseño de Equipo , Humanos
13.
J Med Syst ; 40(1): 19, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26525057

RESUMEN

Radiofrequency ablation therapy of liver cancer is a local mini-invasive treatment technology with several advantages, such as low trauma, safety, effectiveness, and quick postoperative recovery. The application of the optical surgical navigation system in radiofrequency ablation therapy can realize the real-time positioning of surgical instruments and focus. The positioning results can be displayed on the computer, thereby guiding doctors to accurately insert the radiofrequency electrode into the focus and improving surgical efficiency. Meanwhile, the accurate evaluation of the form and size of the ablation focus by the navigation system is the key to realizing the complete ablation of liver cancer. Therefore, based on the heat conduction equation, this paper simplifies the simulation process of the ablation focus, calculates the volume of the ablation focus by distinguishing boundary points and internal points, achieves the effective simulation of the ablation results in the surgery, and reconstructs the ablation focus by using ray casting algorithm and mobile cube algorithm for 3D visualization processing, thereby providing doctors the convenience of being able to simulate the radiofrequency ablation surgery before the actual surgery.


Asunto(s)
Algoritmos , Ablación por Catéter/métodos , Imagenología Tridimensional/instrumentación , Neoplasias Hepáticas/cirugía , Cirugía Asistida por Computador/instrumentación , Humanos
14.
J Med Syst ; 39(10): 129, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-26310950

RESUMEN

CVD (cardiovascular disease) is one of the biggest threats to human beings nowadays. An early and quantitative diagnosis of CVD is important in extending lifespan and improving people's life quality. Coronary artery stenosis can prevent CVD. To diagnose the degree of stenosis, the inner diameter of coronary artery needs to be measured. To achieve such measurement, the coronary artery is segmented by using a method that is based on morphology and the continuity between computed tomography image slices. A centerline extraction method based on mechanical simulation is proposed. This centerline extraction method can figure out a basic framework of the coronary artery by simulating pixel dots of the artery image into mass points. Such mass points have tensile forces, with which the outer pixel dots can be drawn to the center. Subsequently, the centerline of the coronary artery can be outlined by using the local line-fitting method. Finally, the nearest point method is adopted to measure the inner diameter. Experimental results showed that the methods proposed in this paper can precisely extract the centerline of the coronary artery and can accurately measure its inner diameter, thereby providing a basis for quantitative diagnosis of coronary artery stenosis.


Asunto(s)
Algoritmos , Estenosis Coronaria/diagnóstico , Estenosis Coronaria/patología , Vasos Coronarios/patología , Interpretación de Imagen Radiográfica Asistida por Computador/métodos , Estenosis Coronaria/diagnóstico por imagen , Vasos Coronarios/diagnóstico por imagen , Humanos , Reproducibilidad de los Resultados , Tomografía Computarizada por Rayos X
15.
Mol Plant Pathol ; 25(4): e13447, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38561315

RESUMEN

Genetic engineering using negative regulators of plant immunity has the potential to provide a huge impetus in agricultural biotechnology to achieve a higher degree of disease resistance without reducing yield. Type 2C protein phosphatases (PP2Cs) represent the largest group of protein phosphatases in plants, with a high potential for negative regulatory functions by blocking the transmission of defence signals through dephosphorylation. Here, we established a PP2C functional protoplast screen using pFRK1::luciferase as a reporter and found that 14 of 56 PP2Cs significantly inhibited the immune response induced by flg22. To verify the reliability of the system, a previously reported MAPK3/4/6-interacting protein phosphatase, PP2C5, was used; it was confirmed to be a negative regulator of PAMP-triggered immunity (PTI). We further identified PP2C15 as an interacting partner of BRI1-associated receptor kinase 1 (BAK1), which is the most well-known co-receptor of plasma membrane-localized pattern recognition receptors (PRRs), and a central component of PTI. PP2C15 dephosphorylates BAK1 and negatively regulates BAK1-mediated PTI responses such as MAPK3/4/6 activation, defence gene expression, reactive oxygen species bursts, stomatal immunity, callose deposition, and pathogen resistance. Although plant growth and 1000-seed weight of pp2c15 mutants were reduced compared to those of wild-type plants, pp2c5 mutants did not show any adverse effects. Thus, our findings strengthen the understanding of the mechanism by which PP2C family members negatively regulate plant immunity at multiple levels and indicate a possible approach to enhance plant resistance by eliminating specific PP2Cs without affecting plant growth and yield.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , Reproducibilidad de los Resultados , Fosfoproteínas Fosfatasas/genética , Fosfoproteínas Fosfatasas/metabolismo , Fosfoproteínas Fosfatasas/farmacología , Inmunidad de la Planta/fisiología , Regulación de la Expresión Génica de las Plantas , Proteínas Quinasas/genética , Proteínas Quinasas/metabolismo
16.
Int J Med Robot ; : e2601, 2023 Dec 11.
Artículo en Inglés | MEDLINE | ID: mdl-38082485

RESUMEN

BACKGROUND: Robotic puncture system (RPS) consists of an optical tracking system (OTS) and a robotic arm gripping the puncture needle. Typically, the RPS requires hand-eye calibration before the surgery in order to obtain the relative position between the OTS and the robotic arm. However, if there is any displacement or angular deviation in either the robotic arm or the OTS, the calibration results become invalid, necessitating recalibration. METHODS: We propose an uncalibrated robotic puncture method that does not rely on the hand-eye relationship of the RPS. By constructing angle and position graph jacobian matrices respectively, and employing Square Root Cubature Kalman Filter for online estimation. This enables obtaining control variables for the robot to perform puncture operations. RESULTS: In simulation experiments, our method achieves an average error of 1.3495 mm and an average time consumption of 39.331 s. CONCLUSIONS: Experimental results indicate that our method possesses high accuracy, low time consumption, and strong robustness.

17.
Artículo en Inglés | MEDLINE | ID: mdl-37490371

RESUMEN

The demand for cone-beam computed tomography (CBCT) imaging in clinics, particularly in dentistry, is rapidly increasing. Preoperative surgical planning is crucial to achieving desired treatment outcomes for imaging-guided surgical navigation. However, the lack of surface texture hinders effective communication between clinicians and patients, and the accuracy of superimposing a textured surface onto CBCT volume is limited by dissimilarity and registration based on facial features. To address these issues, this study presents a CBCT imaging system integrated with a monocular camera for reconstructing the texture surface by mapping it onto a 3D surface model created from CBCT images. The proposed method utilizes a geometric calibration tool for accurate mapping of the camera-visible surface with the mosaic texture. Additionally, a novel approach using 3D-2D feature mapping and surface parameterization technology is proposed for texture surface reconstruction. Experimental results, obtained from both real and simulation data, validate the effectiveness of the proposed approach with an error reduction to 0.32 mm and automated generation of integrated images. These findings demonstrate the robustness and high accuracy of our approach, improving the performance of texture mapping in CBCT imaging.

18.
Turk Neurosurg ; 33(2): 199-207, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-35652175

RESUMEN

AIM: To perform an accurate primary repair of temporal bone defects. MATERIAL AND METHODS: The temporal bone defect models were performed in beagles. Extended estimated patches of the defects were predesigned by 3D reconstruction software and molded from polyether ether ketone (PEEK) using a lathe. The precise trimming of the extended PEEK patches was established via coordinate transformation of the patches between the navigation system and the reconstruction software, and in real-time tracing via intraoperative navigation. Trimmed PEEK patches were embedded onto the defects. Blood tests and image examinations were conducted postoperatively. RESULTS: The extended PEEK patches were prepared precisely according to the predesign. Real-time tracing of the actual skull defect profile was performed quickly and accurately. Trimmed skull patches perfectly matched the shape of the defects. No signs of infection, absorption, or translocation of the patches occurred postoperatively, and little epidural effusion was found. CONCLUSION: With the assistance of navigation and 3D reconstruction technology, customized molded PEEK patches can be used for accurate primary repair of temporal bone defects.


Asunto(s)
Polietilenglicoles , Prótesis e Implantes , Perros , Animales , Cetonas , Cráneo/cirugía
19.
Plants (Basel) ; 12(14)2023 Jul 21.
Artículo en Inglés | MEDLINE | ID: mdl-37514328

RESUMEN

Reversible phosphorylation of proteins is a ubiquitous regulatory mechanism in vivo that can respond to external changes, and plays an extremely important role in cell signal transduction. Protein phosphatase 2C is the largest protein phosphatase family in higher plants. Recently, it has been found that some clade A members can negatively regulate ABA signaling pathways. However, the functions of several subgroups of Arabidopsis PP2C other than clade A have not been reported, and whether other members of the PP2C family also participate in the regulation of ABA signaling pathways remains to be studied. In this study, based on the previous screening and identification work of PP2C involved in the ABA pathway, the clade F member PIA1 encoding a gene of the PP2C family, which was down-regulated after ABA treatment during the screening, was selected as the target. Overexpression of PIA1 significantly down-regulated the expression of ABA marker gene RD29A in Arabidopsis protoplasts, and ABA-responsive elements have been found in the cis-regulatory elements of PIA1 by promoter analysis. When compared to Col-0, transgenic plants overexpressing PIA1 were less sensitive to ABA, whereas pia1 showed the opposite trait in seed germination, root growth, and stomatal opening experiments. Under drought stress, SOD, POD, CAT, and APX activities of PIA1 overexpression lines were lower than Col-0 and pia1, while the content of H2O2 was higher, leading to its lowest survival rate in test plants, which were consistent with the significant inhibition of the expression of ABA-dependent stress-responsive genes RD29B, ABI5, ABF3, and ABF4 in the PIA1 transgenic background after ABA treatment. Using yeast two-hybrid and luciferase complementation assays, PIA1 was found to interact with multiple ABA key signaling elements, including 2 RCARs and 6 SnRK2s. Our results indicate that PIA1 may reduce plant drought tolerance by functioning as a common negative regulator involved in ABA signaling pathway.

20.
Plant Sci ; 331: 111686, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-36963637

RESUMEN

Many pattern-recognition receptors (PRRs) and their corresponding ligands have been identified. However, it is largely unknown how similar and different these ligands are in inducing plant innate immunity and affecting plant development. In this study, we examined three well characterized ligands in Arabidopsis thaliana, namely flagellin 22 (flg22), plant elicitor peptide 1 (pep1) and a conserved 20-amino-acid fragment found in most necrosis and ethylene-inducing peptide 1-like proteins (nlp20). Our quantitative analyses detected the differences in amplitude in the early immune responses of these ligands, with nlp20-induced responses typically being slower than those mediated by flg22 and pep1. RNA sequencing showed the shared differentially expressed genes (DEGs) was mostly enriched in defense response, whereas nlp20-regulated genes represent only a fraction of those genes differentially regulated by flg22 and pep1. The three elicitors all inhibited primary root growth, especially pep1, which inhibited both auxin transport and signaling pathway. In addition, pep1 significantly inhibited the cell division and genes involved in cell cycle. Compared with flg22 and nlp20, pep1 induced much stronger expression of its receptor in roots, suggesting a potential positive feedback regulation in the activation of immune response. Despite PRRs and their co-receptor BAK1 were necessary for both PAMP induced immune response and root growth inhibition, bik1 mutant only showed impaired defense response but relatively normal root growth inhibition, suggesting BIK1 acts differently in these two biological processes.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Flagelina/farmacología , Flagelina/genética , Arabidopsis/fisiología , Proteínas de Arabidopsis/metabolismo , Péptidos/metabolismo , Inmunidad de la Planta/genética , Regulación de la Expresión Génica de las Plantas , Proteínas Serina-Treonina Quinasas/metabolismo
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