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1.
J Transl Med ; 22(1): 125, 2024 02 01.
Artículo en Inglés | MEDLINE | ID: mdl-38303030

RESUMEN

BACKGROUND: Previous studies have shown that changes in the microbial community of the female urogenital tract are associated with Human papillomavirus (HPV) infection. However, research on this association was mostly focused on a single site, and there are currently few joint studies on HPV infection and multiple sites in the female urogenital tract. METHODS: We selected 102 healthy women from Yunnan Province as the research object, collected cervical exfoliation fluid, vaginal, urethral, and rectal swabs for microbial community analysis, and measured bacterial load, and related cytokine content. The link between HPV, microbiota, and inflammation was comprehensively evaluated using bioinformatics methods. FINDINGS: The impact of HPV infection on the microbial composition of different parts varies. We have identified several signature bacterial genera that respond to HPV infection in several detection sites, such as Corynebacterium, Lactobacillus, Campylobacter, and Cutibacterium have been detected in multiple sites, reflecting their potential significance in cross body sites HPV infection responses. There was a solid microbial interaction network between the cervix, vagina, and urethra. The interrelationships between inflammatory factors and different bacterial genera might also affect the immune system's response to HPV infection. INTERPRETATION: It might be an effective strategy to prevent and treat HPV infection by simultaneously understanding the correlation between the microbial changes in multiple parts of the female urogenital tract and rectum and HPV infection, and controlling the microbial network related to HPV infection in different parts.


Asunto(s)
Infecciones por Papillomavirus , Recto , Femenino , Humanos , China , Vagina/microbiología , Bacterias , ARN Ribosómico 16S , Papillomaviridae
2.
Artículo en Inglés | MEDLINE | ID: mdl-38652218

RESUMEN

Etomidate is a nonbarbiturate sedative derived from imidazole. Prolonged and excessive use of etomidate can lead to the suppression of adrenocortical function, myoclonus, and even death. This report describes a rare case of a 47-year-old man who died from acute intoxication after oral ingestion of liquid containing etomidate. The cause of death was conclusively attributed to etomidate based on a comprehensive investigation, including autopsy, histopathological examination, toxicological analysis, and biochemical analysis. This is the first reported case of a fatality solely resulting from the oral ingestion of etomidate, which can provide valuable insights for future forensic investigations involving etomidate poisoning. Therefore, it is imperative to share this case with the scientific community.

3.
Opt Lett ; 48(23): 6336-6339, 2023 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-38039261

RESUMEN

Due to the influence of chemical reactions, phase change, and other phenomena, the combustion system is a complicated high-temperature environment. Therefore, the spatio-temporally resolved monitoring of the temperature field is crucial for gaining a comprehensive understanding of the intricate combustion environment. In this study, we proposed a fast and high-precision temperature measurement technique based on mid-infrared (MIR) dual-comb spectroscopy with a high spectral resolution and fast refresh rate. Based on this technique, the spatio-temporally resolved measurement of a non-uniform temperature field was achieved along the laser path. To verify the capability of DCS for temperature measurement, the bandhead ro-vibrational lines of the CO2 molecule were acquired, and the 1-σ uncertainty of the retrieved temperature was 3.2°C at 800°C within 100 ms. The results demonstrate the potential of our fast and high-precision laser diagnostic technique which can be further applied to combustion kinetics.

4.
J Acoust Soc Am ; 154(4): 2112-2123, 2023 10 01.
Artículo en Inglés | MEDLINE | ID: mdl-37787599

RESUMEN

Acoustic spectroscopy and neural networks (NNs) are applied to on-line real-time measurement of particle size distribution (PSD) during wet milling of pharmaceutical nanocrystals. A method for modeling the relationship between acoustic attenuation spectra and PSD is proposed that is based on NNs and principal component analysis (PCA). PCA reduces the dimensions of both the spectra and the PSD; then, a neural network model of 2 × 2 × 2 (input, hidden, output layer nodes) with only eight connection weights is built. Compared with previous instrument models that could require as many as 14 physical properties, the current approach does not need any prior knowledge of the system's properties. In addition, the time taken to complete a PSD measurement is reduced from minutes to seconds and it always generates a single solution, rather than possible multiple PSD solutions as in early methods. Application to hydrotalcite nanomilling found good agreement between the on-line measurements and off-line analysis.


Asunto(s)
Nanopartículas , Redes Neurales de la Computación , Análisis Espectral , Acústica , Preparaciones Farmacéuticas
5.
Mol Genet Genomics ; 297(1): 241-262, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-35031862

RESUMEN

Southwest China was the crossroad for the initial settler people of East Asia, which shows the highest diversity in languages and genetics. This region played a significant role in the formation of the genetic makeup of the proto-Hmong-Mien-speaking people and in the north-to-south human expansion during the Neolithic-to-historic transformation. Their genetic history covering migration events and the admixture processes still needs to be further explored. Therefore, in the current study, we have generated genome-wide data from three genomic aspects covering autosomal, mitochondrial and Y-chromosomal regions in 260 Hmong-Mien, Tibeto-Burman, and Sinitic people from 29 different southwestern Chinese groups, and further analyzed them with 2676 published modern and ancient Eurasian genomes. Here, we have noticed a new southwestern East Asian genetic cline composed of the Hmong-Mien-specific ancestry enriched in modern Hmong and Pathen. This newly identified southern inland East Asian lineage contributed to a great extent of the gene pool in the modern southern East Asians. We also have observed genetic substructure among Hmong-Mien-speaking populations. The southern Hmong-Mien-speaking people showed more genetic affinity with modern Tai-Kadai/Austroasiatic people, while the northern Hmong-Mien speakers expressed a closer genetic connection with the Neolithic-to-modern northern East Asians. Moreover, southwestern Sinitic populations had a strong genomic affinity with the adjacent Hmong-Mien-speaking populations and the lowlander Tibeto-Burman-speaking populations, which suggested the large-scale genetic admixture occurred between them. Allele-sharing-based qpAdm/qpGraph results further confirmed that all included southwestern Chinese populations could be modeled as a mixed result of the major ancestry component from the northern millet farmers in the Yellow River basin and the minor ancestry component from the southern rice farmers in the Yangtze River basin. Usually, this newly identified Hmong-Mien-associated southern East Asian ancestry could improve our understanding of the full-scale genetic landscape of the evolutionary and admixture history of southwestern East Asians. Further ancient genomic studies from southeastern China are required to shed deeper light on our established phylogeny context.


Asunto(s)
Pueblo Asiatico/genética , Etnicidad/genética , Migrantes , Pueblo Asiatico/etnología , China/etnología , Etnicidad/estadística & datos numéricos , Femenino , Flujo Genético , Especiación Genética , Variación Genética , Genética de Población , Geografía , Migración Humana , Humanos , Hibridación Genética/genética , Masculino , Filogenia , Migrantes/estadística & datos numéricos
6.
Phys Chem Chem Phys ; 24(35): 20980-20987, 2022 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-36000294

RESUMEN

It is widely recognized that the intrinsic dipole in two-dimensional (2D) photocatalysts promotes hydrogen production during water splitting. Herein, we wonder whether the intrinsic dipole plays a negative role in water splitting. In this work, we make a comparative study of the structural, electronic, and photocatalytic properties of Janus B2XY (X, Y = S, Se, Te) and F-BNBN-H monolayers using first principles. Our theoretical results reveal that both B2XY and F-BNBN-H monolayers exhibit spatially separated conduction band minimum (CBM) and valence band maximum (VBM), as well as vacuum level differences at the opposite surfaces due to the intrinsic dipole. The F-BNBN-H monolayer has excellent redox ability for water splitting, because its CBM is located at the surface with a lower vacuum level and its VBM is distributed on the opposite surface possessing a higher vacuum level. By sharp contrast, B2XY monolayers have limited or vanishing redox ability, because their CBM is located at the surface with a higher vacuum level and their VBM is distributed on the opposite surface with a lower vacuum level. This work emphasizes the negative role of vacuum level differences of photocatalysts caused by the intrinsic dipole in water splitting.

7.
Genomics ; 113(4): 2199-2210, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-34022340

RESUMEN

The Mongolians are mainly distributed in the modern state of Mongolia, China, Russia, and other countries. While the historic and archaeological records of the rise and fall of the Mongol Empire are well documented, little has been known about the genetic legacy of modern Mongolian populations. Here, 611 Mongolian individuals from Hohhot, Hulunbuir, and Ordos of China were genotyped via the 47 Insertion/Deletion markers. Forensically statistical parameters indicated that this InDel system could be applied to forensic investigation in Mongolian populations. The comprehensive population comparisons indicated that targeted Mongolian populations are a homogeneous population, which kept close genetic proximity with geographically northern East Asians. The findings of the model-based clustering analysis revealed a southern East Asian-specific ancestral component, which was maximized in Hainan Li, and Mongolian populations harbored relatively less Hainan Li-related ancestry and more northern East Asian-related ancestry compared with reference Tai-Kadai, Austroasiatic and Sinitic people.


Asunto(s)
Genética de Población , Mutación INDEL , Pueblo Asiatico/genética , China , Etnicidad/genética , Frecuencia de los Genes , Humanos , Biología Molecular
8.
Mol Genet Genomics ; 296(3): 631-651, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33650010

RESUMEN

Trans-Eurasian cultural and genetic exchanges have significantly influenced the demographic dynamics of Eurasian populations. The Hexi Corridor, located along the southeastern edge of the Eurasian steppe, served as an important passage of the ancient Silk Road in Northwest China and intensified the transcontinental exchange and interaction between populations on the Central Plain and in Western Eurasia. Historical and archeological records indicate that the Western Eurasian cultural elements were largely brought into North China via this geographical corridor, but there is debate on the extent to which the spread of barley/wheat agriculture into North China and subsequent Bronze Age cultural and technological mixture/shifts were achieved by the movement of people or dissemination of ideas. Here, we presented higher-resolution genome-wide autosomal and uniparental Y/mtDNA SNP or STR data for 599 northwestern Han Chinese individuals and conducted 2 different comprehensive genetic studies among Neolithic-to-present-day Eurasians. Genetic studies based on lower-resolution STR markers via PCA, STRUCTURE, and phylogenetic trees showed that northwestern Han Chinese individuals had increased genetic homogeneity relative to northern Mongolic/Turkic/Tungusic speakers and Tibeto-Burman groups. The genomic signature constructed based on modern/ancient DNA further illustrated that the primary ancestry of the northwestern Han was derived from northern millet farmer ancestors, which was consistent with the hypothesis of Han origin in North China and more recent northwestward population expansion. This was subsequently confirmed via excess shared derived alleles in f3/f4 statistical analyses and by more northern East Asian-related ancestry in the qpAdm/qpGraph models. Interestingly, we identified one western Eurasian admixture signature that was present in northwestern Han but absent from southern Han, with an admixture time dated to approximately 1000 CE (Tang and Song dynasties). Generally, we provided supporting evidence that historic Trans-Eurasian communication was primarily maintained through population movement, not simply cultural diffusion. The observed population dynamics in northwestern Han Chinese not only support the North China origin hypothesis but also reflect the multiple sources of the genetic diversity observed in this population.


Asunto(s)
Pueblo Asiatico/genética , Genoma/genética , China , Cromosomas Humanos Y/genética , ADN Antiguo , ADN Mitocondrial/genética , Etnicidad/genética , Genética de Población/métodos , Estudio de Asociación del Genoma Completo/métodos , Migración Humana , Humanos , Filogenia , Polimorfismo de Nucleótido Simple/genética
9.
Opt Express ; 29(17): 27600-27611, 2021 Aug 16.
Artículo en Inglés | MEDLINE | ID: mdl-34615173

RESUMEN

Dual-comb spectroscopy (DCS) is a powerful spectroscopic technique, which is developing for the detection of transient species in reaction kinetics on a short time scale. Conventionally, the simultaneous determination of multiple species is limited to the requirement of broadband spectral measurement at the cost of the measurement speed and spectral resolution owing to the inherent trade-off among these characteristics in DCS. In this study, a high-speed multi-molecular sensing is demonstrated and achieved through using a programmable spectrum-encoded DCS technique, where multiple narrow encoding spectral bands are reserved selectively and other comb lines are filtered out. As a dual-comb spectrometer with a repetition rate of 108 MHz is encoded spectrally over a spectral coverage range of 1520 to 1580 nm, the measurement speed is increased 6.15 times and single-shot absorption spectra of multiple molecules (C2H2, HCN, CO, CO2) at a time scale of 208 µs are obtained. Compared to conventional single-shot dual-comb spectra, encoded dual-comb spectra have improved short-term signal-to-noise ratios (SNRs) by factors of 3.65 with four encoding bands and 5.68 with two encoding bands. Furthermore, a fiber-Bragg-grating-based encoded DCS is demonstrated, which reaches 17.1 times higher average SNR than that of the unencoded DCS. This spectrum-encoded technique can largely improve the DCS measurement speed, and thus is promising for use in studies on multi-species reaction kinetics.

10.
Mol Genet Genomics ; 295(4): 969-979, 2020 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-32279092

RESUMEN

The Tibetan-Yi Corridor, located on the eastern edge of the Tibetan Plateau, is the main route of the people of the plateau. Human settlement and diffusion along the corridor have played a pivotal role in shaping the genetic architecture of Sino-Tibetan-speaking (STs) populations in China. In this study, five STs groups (Chengdu Tibetan, Chengdu Han, Muli Tibetan, Lugu Lake Mosuo and Xichang Yi) settling in the Tibetan-Yi Corridor were genotyped via AGCU InDel 50 kit on the capillary electrophoresis platform to decrypt the genetic landscape and phylogenetic relationship of STs populations and investigate the forensic characteristics. Allele frequency distributions of all autosomal insertion/deletion polymorphisms (InDels) in studied groups comply with Hardy-Weinberg equilibrium. The combined power of discrimination values are 0.9999999999999999998, 0.9999999999999999995, 0.9999999999999999999, 0.999999999999999993 and 0.99999999999999999994, respectively, and all the combined probability of exclusion values exceed 0.9990. Forensically relevant statistics implied that these InDels could be used for individual identification and as a promising alternative to STR profiling in paternity testing. Typical population comparisons showed strikingly high homogeneity among studied STs people, indicating complicated genetic admixture among populations in the Tibetan-Yi Corridor. The STs groups in the Tibetan-Yi Corridor keep close genetic affinity with geographically or linguistically close populations, and the genetic components of investigated populations arose from a mixture of multiple ancestral gene pools (resulting from the admixture from the ancestral Highland Tibetans and ancestral Lowland indigenous populations).


Asunto(s)
Evolución Molecular , Genética de Población , Mutación INDEL/genética , Filogenia , China/epidemiología , Etnicidad/genética , Femenino , Genética Forense/estadística & datos numéricos , Frecuencia de los Genes , Humanos , Masculino , Polimorfismo Genético , Tibet/epidemiología
11.
Opt Express ; 28(19): 27433-27442, 2020 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-32988037

RESUMEN

Coherent pulse synthesis in the mid-infrared (mid-IR) domain is of great interest to achieve broadband sources from parent pulses, motivated by the advantages of optical frequency properties for molecular spectroscopy and quantum dynamics. We demonstrate a simple mid-IR coherent synthesizer based on two high-repetition-rate optical parametric amplifiers (OPAs) at nJ-level pump energy. The relative carrier envelope phase between the two OPAs was passively stable for a shared continuous wave (CW) quantum cascade laser (QCL) seed. Lastly, we synthesized mid-IR pulses with a duration of 105 fs ranging from 3.4 to 4.0 µm. The scheme demonstrated the potential to obtain broader mid-IR sources by coherent synthesis from multiple CW QCL-seeded OPAs.

12.
Electrophoresis ; 41(23): 2021-2028, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-32770750

RESUMEN

In recent years, differentially expressed small RNAs have been widely used to identify the compositions of forensically relevant biological samples, and a vast number of such RNA candidates have been proposed. Nevertheless, when assessing the expression levels of target small RNAs using relative quantitative analysis methods, credible internal controls are usually required for reliable data normalization. Therefore, the identification of optimal reference genes is an important task. In this study, the expression profile of 18 small RNA reference genes was characterized in the Chinese Han population using TaqMan real-time quantitative PCR. Systematic evaluations of these candidate genes were performed based on their expression levels and stability in several common types of body fluids (i.e., venous blood, menstrual blood, saliva, semen, and vaginal secretions). Analysis results from the ΔCq method, BestKeeper, NormFinder, and geNorm were integrated by RefFinder for ranking and comparing the candidates in each type of body fluid. Among all the candidates, miR-191 was identified as the most suitable reference gene because it had a favorable ranking value in all tested samples. In addition, miR-423, miR-93, miR-484, and let-7i were also shown to be applicable reference genes. Overall, this study provides detailed assessment results of these candidate genes in different body fluids; thus, it could be used as a guide for the selection of reference genes according to their performance in the sample of choice.


Asunto(s)
Pueblo Asiatico/genética , Perfilación de la Expresión Génica/métodos , MicroARNs , Transcriptoma/genética , Adulto , Líquidos Corporales/fisiología , China , Femenino , Genética Forense , Marcadores Genéticos , Humanos , Masculino , MicroARNs/análisis , MicroARNs/genética , Especificidad de Órganos , Reacción en Cadena en Tiempo Real de la Polimerasa , Adulto Joven
13.
Ann Hum Biol ; 47(3): 300-303, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-32202169

RESUMEN

Background: Insertions and deletions (Indels) have been used in routine forensic studies, archaeology, and population genetics. They have certain advantages, such as absence of stutter, small amplicon lengths, and low mutation rates. The genetic variations and forensic features of Indels in the Wuzhong Hui population are, as yet, unclear.Aim: To investigate the genetic polymorphisms of 30 Indels in Wuzhong Hui people and explore their genetic relationship with 48 reference populations from all over the world.Subjects and methods: We genotyped 30 Indels included in the Investigator DIPplex Kit in 156 Wuzhong Hui individuals. The genetic polymorphisms and population genetic relationships were analysed and explored via pairwise Fst, principal component analysis, multidimensional scaling plots, phylogenetic tree, and structure.Results: The combined power of discrimination (CPD) and the combined probability of exclusion (CPE) were 0.9999999999899 and 0.9880, respectively. Population genetic diversity and affinity were associated with geographic origin and linguistic affiliation.Conclusions: The 30 Indels can be utilised as an important tool in forensic personal identification and as a supplementary method in paternity testing in Wuzhong Hui. The Wuzhong Hui people have a close genetic relationship with populations of geographical proximity and Sinitic-speaking populations, while they are different from other continental populations and Turkic-speaking populations.


Asunto(s)
Mutación INDEL/genética , Polimorfismo Genético , China , Etnicidad/genética , Humanos , Filogenia , Análisis de Componente Principal
14.
Mol Genet Genomics ; 294(5): 1343-1357, 2019 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-31197471

RESUMEN

China, inhabited by over 1.3 billion people and known for its genetic, cultural and linguistic diversity, is considered to be indispensable for understanding the association between language families and genetic diversity. In order to get a better understanding of the genetic diversity and forensic characteristics of Tai-Kadai-speaking populations in Southwest China, we genotyped 30 insertion/deletion (InDel) markers and amelogenin in 205 individuals from Tai-Kadai-speaking Bouyei people using the Qiagen Investigator DIPplex amplification kit. We carried out a comprehensive population genetic relationship investigation among 14,303 individuals from 84 worldwide populations based on allele frequency correlation and 4907 genotypes of 30 InDels from 36 populations distributed in all continental or major subregions and seven linguistic phyla in China. Forensic parameters observed show highly polymorphic and informative features for Asians, although the DIPplex kit was developed focusing on Europeans, and indicate that this amplification system is appropriate to forensic personal identification and parentage testing. Patterns of InDel variations revealed by principal components analysis, multidimensional scaling plots, phylogenetic relationship exploration, model-based clustering as well as four pairwise genetic distances (Fst, Nei, Cavalli-Sforza and Reynolds) demonstrate significant genetic differentiation at the continental scale and genetic uniformity in Asia except for Tibeto-Burman and Turkic-speaking populations. Additionally, Tai-Kadai speakers, including Bouyei, Zhuang and Dong, share more genetic ancestry components than with other language speakers, and in general they are genetically very similar to Hmong-Mien-speaking populations. The dataset of Bouyei people generated in the present study is valuable for forensic identification and parentage tests in China.


Asunto(s)
Pueblo Asiatico/genética , Etnicidad/genética , Marcadores Genéticos/genética , Mutación INDEL/genética , Mutagénesis Insercional/genética , China , Genética Forense/métodos , Eliminación de Gen , Frecuencia de los Genes/genética , Genética de Población/métodos , Genotipo , Humanos , Filogenia , Análisis de Componente Principal/métodos
15.
Opt Lett ; 44(23): 5848-5851, 2019 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-31774795

RESUMEN

We demonstrate an effective method to obtain high-repetition-rate femtosecond mid-infrared (mid-IR) pulses by nonlinear optical modulation of mid-IR continuous-wave (CW) quantum and interband cascade lasers (ICLs and QCLs). In the experiment, a high-repetition-rate femtosecond ytterbium-doped fiber laser with nanojoule-level pulse energy was used as the pump source of optical parametric amplifiers to modulate and amplify the mid-IR CW laser. Near transform-limited 84 fs duration (7.3 cycles) mid-IR pulses were generated with above 200 mW average power and a repetition rate of 160 MHz. Moreover, the spectral tunability was demonstrated using CW QCL at different wavelengths. The scheme offered a simple method to produce high-repetition-rate ultrashort pulses and that can be flexibly adopted in other mid-IR regions.

16.
Int J Legal Med ; 133(1): 105-108, 2019 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-30218175

RESUMEN

Genetic characterization of ethnically and geographically diverse populations via short tandem repeats (STRs) is relevant to various fundamental and applied areas of forensic genetics, population studies, and even molecular anthropology. In the present study, genetic polymorphisms of 15 autosomal STR loci were firstly obtained from 918 individuals (495 Nakhis and 423 Yis) residing in the foothills of the Himalayas. The cumulative powers of discrimination and probabilities of exclusion in the two studied ethnic groups were both larger than 0.999999999999999982 and 0.9999961, respectively. Genetic similarities and differences among 61 populations were subsequently investigated by pairwise Cavalli-Sforza genetic distance, multidimensional scaling plots, principal component analysis, and phylogenetic relationship reconstruction. Both Nakhi and Yi had the genetically close relationships with Yunnan Bai and distinct relationships with Xinjiang Turkic-speaking populations (Uyghur and Kazakh) and Vietnamese.


Asunto(s)
Pueblo Asiatico/genética , Dermatoglifia del ADN , Frecuencia de los Genes , Polimorfismo Genético , China , Genética de Población , Humanos , Repeticiones de Microsatélite
17.
Ann Hum Biol ; 46(6): 498-501, 2019 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-31665944

RESUMEN

Kyrgyz people, a Turkic-speaking ethnic group native to Central Asia, are considered as one mixed population from different historical tribes through the processes of conquest, intermarriage, assimilation and migration. The aim of this study was to infer the forensic statistical parameters and genetic structure of Chinese Kyrgyz and explore the patterns of their genetic relationships with adjacent and worldwide reference populations. We genotyped 25 forensic-related markers (amelogenin, Y-indel of rs2032678 and 23 Autosomal Short Tandem Repeats, A-STRs) in 491 Chinese Kyrgyzs. Allele frequency and forensic parameters were calculated using the STRAF software. Pairwise genetic distances were estimated using Phylip and subsequently dissected via principal component analysis, multidimensional scaling plots and phylogenetic relationship reconstruction. Investigations of allele frequency and forensic parameters indicated that all studied A-STRs are informative in the Chinese Kyrgyz population and can be used as a powerful tool in forensic individual identification and parentage testing. Results from genetic relationship analyses demonstrated that Akto Kyrgyz people harbour a genetically close relationship with Turkic-speaking Uyghur and Kazakh. Genetic structure analysis based on the raw genotype data among Eurasian populations further suggested that genetic ancestries and population substructures in Asia are largely associated with language and geography.


Asunto(s)
Etnicidad/genética , Marcadores Genéticos , Polimorfismo Genético , China , Femenino , Pruebas Genéticas , Genotipo , Humanos , Lenguaje , Masculino
18.
Ann Hum Biol ; 46(6): 514-518, 2019 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-31559868

RESUMEN

Background: Short tandem repeats (STRs) have gained considerable attention in family search (Y-chromosomal STRs), complex paternity identification (X-chromosomal STRs), routine forensic personal identification (autosomal STRs) and population genetics.Aim: To explore the forensic characteristics of 23 autosomal STRs included in the Huaxia Platinum system in the South Pakistan Hazara population and investigate the genetic similarities and differences between Hazara and 54 worldwide reference populations.Subjects and methods: Variation of the 23 autosomal STRs included in the Huaxia Platinum system was first investigated and reported in a sample of 261 Quetta Hazara in Balochistan Province, Southwest Pakistan.Results: The combined power of discrimination is 0.999999999999999999999999999 and combined power of exclusion is 0.99999999989596 in Quetta Hazara. Comprehensive population comparisons between Hazara and another 13 Eurasian populations based on genotype data, as well as between Hazara and 54 worldwide populations based on the allele frequency distribution, were conducted. Multidimensional scaling plots, principal component analysis, and neighbour-joining phylogenetic trees consistently demonstrated that Pakistan Hazara harbours close affinities with neighbouring Turkic-speaking populations. Model-based genetic structure analysis further suggests that Quetta Hazara derives about half its ancestry directly from the East Asians.Conclusion: Twenty-five forensic-related markers included in the Huaxia Platinum system can be used for forensic practice in the Central Asia Hazara population. Quetta Hazara has a close genetic relationship with the Turkic-speaking populations of Uyghur and Kazakh. Further whole-genome sequencing of Hazara needs to be conducted to validate the observed genetic structure and reconstruct the fine-scale population history of Hazara.


Asunto(s)
Etnicidad/genética , Sitios Genéticos , Repeticiones de Microsatélite , Filogenia , Polimorfismo Genético , Femenino , Pruebas Genéticas , Genética de Población , Genotipo , Humanos , Masculino , Pakistán
19.
Ann Hum Biol ; 46(7-8): 589-600, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31762339

RESUMEN

Background: The Uyghur is the fifth largest group in China and also the largest ethnic minority in Xinjiang.Aim: To explore the genetic variations of 27 forensic genetic markers included in the newly developed SureID® PanGlobal Human DNA Identification System and analyse the genetic relationship between Xinjiang Uyghur and their neighbours.Subjects and methods: We genotyped 27 markers in 2,189 unrelated Uyghur individuals from the Hotan Prefecture in Southwest Xinjiang. Comprehensive population genetic studies among Chinese populations and worldwide populations were conducted via various statistics.Results: The combined power of discrimination (CPD) and the combined power of exclusion (CPE) of the new-generation autosomal STR amplification system in the Hotan Uyghur are 9,9999-E01 and 9,9999-E01, respectively. Population genetic studies indicate that the Hotan Uyghur show a close genetic relationship with geographically different Uyghurs and Kazakhs, while significant genetic differentiation exists between the Hotan Uyghur and some ethnicities from other non-Turkic-speaking populations. The results of population comparisons among the 52 worldwide populations demonstrate that geographically approached intercontinental populations have close genetic relationships.Conclusions: 24 autosomal STRs are highly polymorphic and informative in the Uyghur and this system is suitable for forensic personal identification and paternity testing. Our findings not only reveal that Chinese Uyghur is a homogenous population based on forensic genetic markers, but also indicate that population genetic affinity is closely related to the adjacent populations with common ethnic origin.


Asunto(s)
Etnicidad/genética , Repeticiones de Microsatélite , Polimorfismo Genético , China , Femenino , Genética Forense , Humanos , Masculino
20.
Ann Hum Biol ; 46(7-8): 574-580, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31795774

RESUMEN

Background: Guizhou province is located in southwest China with abundant genetic, linguistic and cultural diversity. The Bouyei is one of the 18 officially recognised minority groups in Guizhou, accounting for about 97% of the total Bouyei population in China. However, the genetic history and forensic characterisation of the Bouyei people is largely unknown due to a lack of genetic data.Aim: We aim to investigate genetic polymorphisms and forensic characterisation of the Guizhou Bouyei population, as well as the relationships between the Bouyei and other East Asian populations.Subjects and methods: We genotyped 19 X-STRs in 188 males and 165 females of Guizhou Bouyei using the AGCU X19 STR Kit. We estimated allele frequencies, forensic parameters and genetic distances between the Bouyei and other East Asian populations. We presented the genetic distances in a phylogenetic tree, an MDS plot and a PCA plot.Results: In Guizhou Bouyei individuals, we observed 216 alleles with corresponding frequencies ranging from 0.0019 to 0.6757. All of the six combined powers of PDm, PDf, MEC Krüger, MEC Kishida, MEC Desmarais and MEC Desmarais in allele diversity and haplotype diversity are larger than 0.99999995. We found genetic affinities among the Bouyei people and their geographical neighbouring populations in Guizhou, such as the Sui, Miao and Han.Conclusions: The highly polymorphic and informative forensic parameters of the 19 X-STRs in Bouyei people show the powerful potential of those markers in forensic identification and parentage tests. The genetic relationships of the Bouyei with other East Asian populations correspond well with geographic affiliations as well as linguistic classifications.


Asunto(s)
Cromosomas Humanos X/genética , Etnicidad/genética , Genotipo , Repeticiones de Microsatélite , Polimorfismo Genético , China , Femenino , Genética Forense , Humanos , Masculino
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