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1.
Biosci Biotechnol Biochem ; 85(8): 1910-1914, 2021 Jul 23.
Artículo en Inglés | MEDLINE | ID: mdl-34100908

RESUMEN

We present the complete genome sequences of 3 Erwinia rhapontici strains, MAFF 311153, 311154, and 311155. These chromosome sequences contained variety types of luxI/luxR gene pair involved in acylhomoserine lactone biosynthesis and reception. Large-scale insertion sequence was observed in the indigenous plasmid of MAFF 311154 and contained eraI3/eraR3 gene pair that make possible to produce acylhomoserine lactone.


Asunto(s)
Erwinia/patogenicidad , Genoma Bacteriano , Percepción de Quorum/genética , Acil-Butirolactonas/metabolismo , Erwinia/genética , Erwinia/metabolismo , Plásmidos
2.
New Phytol ; 225(3): 1327-1342, 2020 02.
Artículo en Inglés | MEDLINE | ID: mdl-31550400

RESUMEN

Some virulence effectors secreted from pathogens target host proteins and induce biochemical modifications that are monitored by nucleotide-binding and leucine-rich repeat (NLR) immune receptors. Arabidopsis RIN4 protein (AtRIN4: RPM1-interacting protein 4) homologs are present in diverse plant species and targeted by several bacterial type III effector proteins including the cysteine protease AvrRpt2. RIN4 is 'guarded' by several independently evolved NLRs from various plant species, including Arabidopsis RPS2. Recently, it was shown that the MR5 NLR from a wild apple relative can recognize the AvrRpt2 effector from Erwinia amylovora, but the details of this recognition remained unclear. The present contribution reports the mechanism of AvrRpt2 recognition by independently evolved NLRs, MR5 from apple and RPS2, both of which require proteolytically processed RIN4 for activation. It shows that the C-terminal cleaved product of apple RIN4 (MdRIN4) but not AtRIN4 is necessary and sufficient for MR5 activation. Additionally, two polymorphic residues in AtRIN4 and MdRIN4 are identified that are crucial in the regulation of and physical association with NLRs. It is proposed that polymorphisms in RIN4 from distantly related plant species allow it to remain an effector target while maintaining compatibility with multiple NLRs.


Asunto(s)
Evolución Biológica , Proteasas de Cisteína/metabolismo , Erwinia/enzimología , Erwinia/patogenicidad , Interacciones Huésped-Patógeno , Inmunidad Innata , Malus/inmunología , Proteínas de Plantas/metabolismo , Aminoácidos/metabolismo , Arabidopsis/genética , Arabidopsis/inmunología , Arabidopsis/microbiología , Secuencia Conservada , Malus/microbiología , Mutación/genética , Proteínas de Plantas/química , Proteínas de Plantas/genética , Plantas Modificadas Genéticamente , Polimorfismo Genético , Dominios Proteicos , Receptores de Superficie Celular/metabolismo , Virulencia
3.
Proc Natl Acad Sci U S A ; 114(10): E2053-E2062, 2017 03 07.
Artículo en Inglés | MEDLINE | ID: mdl-28137883

RESUMEN

Detection of pathogens by plants is mediated by intracellular nucleotide-binding site leucine-rich repeat (NLR) receptor proteins. NLR proteins are defined by their stereotypical multidomain structure: an N-terminal Toll-interleukin receptor (TIR) or coiled-coil (CC) domain, a central nucleotide-binding (NB) domain, and a C-terminal leucine-rich repeat (LRR). The plant innate immune system contains a limited NLR repertoire that functions to recognize all potential pathogens. We isolated Response to the bacterial type III effector protein HopBA1 (RBA1), a gene that encodes a TIR-only protein lacking all other canonical NLR domains. RBA1 is sufficient to trigger cell death in response to HopBA1. We generated a crystal structure for HopBA1 and found that it has similarity to a class of proteins that includes esterases, the heme-binding protein ChaN, and an uncharacterized domain of Pasteurella multocida toxin. Self-association, coimmunoprecipitation with HopBA1, and function of RBA1 require two previously identified TIR-TIR dimerization interfaces. Although previously described as distinct in other TIR proteins, in RBA1 neither of these interfaces is sufficient when the other is disrupted. These data suggest that oligomerization of RBA1 is required for function. Our identification of RBA1 demonstrates that "truncated" NLRs can function as pathogen sensors, expanding our understanding of both receptor architecture and the mechanism of activation in the plant immune system.


Asunto(s)
Proteínas de Arabidopsis/química , Arabidopsis/química , Arabidopsis/genética , Regulación de la Expresión Génica de las Plantas , Enfermedades de las Plantas/genética , Proteínas de Plantas/química , Arabidopsis/inmunología , Arabidopsis/microbiología , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/inmunología , Sitios de Unión , Muerte Celular/genética , Muerte Celular/inmunología , Cristalografía por Rayos X , Erwinia/patogenicidad , Erwinia/fisiología , Interacciones Huésped-Patógeno , Modelos Moleculares , Mutación , Enfermedades de las Plantas/inmunología , Enfermedades de las Plantas/microbiología , Inmunidad de la Planta/genética , Proteínas de Plantas/genética , Proteínas de Plantas/inmunología , Unión Proteica , Dominios y Motivos de Interacción de Proteínas , Estructura Secundaria de Proteína , Pseudomonas syringae/patogenicidad , Pseudomonas syringae/fisiología , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/inmunología , Transducción de Señal , Nicotiana/genética , Nicotiana/inmunología , Nicotiana/microbiología , Sistemas de Secreción Tipo III/genética , Sistemas de Secreción Tipo III/metabolismo
4.
Phytopathology ; 106(7): 684-92, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-26926487

RESUMEN

Bacterial wilt is one of the most destructive diseases of cucurbits in the Midwestern and Northeastern United States. Although the disease has been studied since 1900, host colonization dynamics remain unclear. Cucumis- and Cucurbita-derived strains exhibit host preference for the cucurbit genus from which they were isolated. We constructed a bioluminescent strain of Erwinia tracheiphila (TedCu10-BL#9) and colonization of different cucurbit hosts was monitored. At the second-true-leaf stage, Cucumis melo plants were inoculated with TedCu10-BL#9 via wounded leaves, stems, and roots. Daily monitoring of colonization showed bioluminescent bacteria in the inoculated leaf and petiole beginning 1 day postinoculation (DPI). The bacteria spread to roots via the stem by 2 DPI, reached the plant extremities 4 DPI, and the plant wilted 6 DPI. However, Cucurbita plants inoculated with TedCu10-BL#9 did not wilt, even at 35 DPI. Bioluminescent bacteria were detected 6 DPI in the main stem of squash and pumpkin plants, which harbored approximately 10(4) and 10(1) CFU/g, respectively, of TedCu10-BL#9 without symptoms. Although significantly less systemic plant colonization was observed in nonpreferred host Cucurbita plants compared with preferred hosts, the mechanism of tolerance of Cucurbita plants to E. tracheiphila strains from Cucumis remains unknown.


Asunto(s)
Cucumis/microbiología , Cucurbita/microbiología , Erwinia/fisiología , Especificidad del Huésped , Erwinia/patogenicidad , Técnicas de Transferencia de Gen , Mediciones Luminiscentes , Plásmidos
5.
Izv Akad Nauk Ser Biol ; (5): 532-543, 2016 Sep.
Artículo en Inglés, Ruso | MEDLINE | ID: mdl-30226940

RESUMEN

The composition and functional structure of the intestinal microflora of three wireworm species (Agriotes obscurus (L.), Selatosomus aeneus (L.), and Ampedus pomorum (Herbst)) with different dietary regimes were studied. The total abundance of the microorganisms was evaluated by fluorescent microscopy, the group composition was assessed by inoculation on a solid glucose-peptone-yeast medium, and the functional diversity was estimated by multisubstrate testing. It was noted that, in the intestine of the larvae, the total number of microorganisms was lower by 1-2 orders of magnitude than in the soil and decaying wood. It was found that the composition of the intestinal microbial communities of wireworms was radically different from that of the substrate: the Bray-Curtis coefficient did not exceed 0.25. It was found that native forms accounted for more than half of the total number of saprotrophic bacteria: in the larvae, gram-positive cocci, enterobacteria, Vibrionaceae, Acinetobacter, and some genera of coryneform bacteria, which were absent in the soil and wood, prevailed. The micromycetes were either absent (Agriotes) or were found in insignificant quantities (Selatosomus, Ampedus). In Selatosomus, apart from the intestinal forms, representatives of Mezorhizobium, No- cardioides, and Erwinia, occurring on plant substrates, were observed.


Asunto(s)
Escarabajos/microbiología , Microbioma Gastrointestinal , Acinetobacter/patogenicidad , Animales , Escarabajos/clasificación , Escarabajos/crecimiento & desarrollo , Erwinia/patogenicidad , Hongos/patogenicidad , Larva/microbiología , Vibrionaceae/patogenicidad
6.
Mikrobiol Z ; 78(5): 30-41, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-30141862

RESUMEN

Aim: To study the phenotypic properties of isolated Erwinia sp. and collection «Erwinia horticola¼ strains for their identification. Methods: The strains pathogenicity and aggressiveness was tested by an artificial infection of apple, pear buds and immature pear fruit. The physiological and biochemical properties of bacteria was investigated using API testing (API 20E and API 50СН test systems). Fatty acid composition of cellular lipids was determined by gas chromatography Results: Analysis of pathogenic, morphological, cultural, physiological, biochemical properties and fatty acid composition of cellular lipids indicates significant similarity «Erwinia horticola¼ collection and Erwinia sp. isolated strains with the Erwinia amylovora typical strain. Conclusiones: Our results cast doubt on the existence of a separate species «Erwinia horticola¼. Though for the final strains classification at species level is necessary to study their genotypic properties.


Asunto(s)
Erwinia/clasificación , Malus/microbiología , Enfermedades de las Plantas/microbiología , Erwinia/patogenicidad , Ácidos Grasos/análisis , Fenotipo , Pyrus/microbiología , Ucrania
7.
Microb Pathog ; 89: 184-7, 2015 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-26522078

RESUMEN

We conducted a greenhouse trial to determine specific compatible interactions between Erwinia tracheiphila strains and cucurbit host species. Using a modified inoculation system, E. tracheiphila strains HCa1-5N, UnisCu1-1N, and MISpSq-N were inoculated to cucumber (Cucumis sativus) cv. 'Sweet Burpless', melon (Cucumis melo) cv. 'Athena Hybrid', and squash (Cucubita pepo) cv. 'Early Summer Crookneck'. We observed symptoms and disease progression for 30 days; recorded the number of days to wilting of the inoculated leaf (DWIL), days to wilting of the whole plant (DWWP), and days to death of the plant (DDP). We found significant interactions between host cultivar and pathogen strains, which imply host specificity. Pathogen strains HCa1-5N and UnisCu1-1N isolated from Cucumis species exhibited more virulence in cucumber and melon than in squash, while the reverse was true for strain MISpSq-N, an isolate from Cucurbita spp. Our observations confirm a previous finding that E. tracheiphila strains isolated from Cucumis species were more virulent on Cucumis hosts and those from Cucubita were more virulent on Cucubita hosts. This confirmation helps in better understanding the pathosystem and provides baseline information for the subsequent development of new disease management strategies for bacterial wilt. We also demonstrated the efficiency of our modified inoculation and disease scoring methods.


Asunto(s)
Cucurbitaceae/microbiología , Erwinia/fisiología , Especificidad del Huésped , Interacciones Huésped-Patógeno , Enfermedades de las Plantas/microbiología , Erwinia/patogenicidad , Virulencia
8.
Mol Plant Microbe Interact ; 26(10): 1115-22, 2013 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-23745678

RESUMEN

Harpins are glycine-rich and heat-stable proteins that are secreted through type III secretion system in gram-negative plant-pathogenic bacteria. Many studies show that these proteins are mostly targeted to the extracellular space of plant tissues, unlike bacterial effector proteins that act inside the plant cells. Over the two decades since the first harpin of pathogen origin, HrpN of Erwinia amylovora, was reported in 1992 as a cell-free elicitor of hypersensitive response (HR), diverse functional aspects of harpins have been determined. Some harpins were shown to have virulence activity, probably because of their involvement in the translocation of effector proteins into plant cytoplasm. Based on this function, harpins are now considered to be translocators. Their abilities of pore formation in the artificial membrane, binding to lipid components, and oligomerization are consistent with this idea. When harpins are applied to plants directly or expressed in plant cells, these proteins trigger diverse beneficial responses such as induction of defense responses against diverse pathogens and insects and enhancement of plant growth. Therefore, in this review, we will summarize the functions of harpins as virulence factors (or translocators) of bacterial pathogens, elicitors of HR and immune responses, and plant growth enhancers.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa/metabolismo , Proteínas Bacterianas/metabolismo , Bacterias Gramnegativas/metabolismo , Enfermedades de las Plantas/microbiología , Plantas/microbiología , Erwinia/metabolismo , Erwinia/patogenicidad , Erwinia/fisiología , Bacterias Gramnegativas/patogenicidad , Bacterias Gramnegativas/fisiología , Interacciones Huésped-Patógeno , Enfermedades de las Plantas/inmunología , Inmunidad de la Planta , Plantas/inmunología , Pseudomonas/metabolismo , Pseudomonas/patogenicidad , Pseudomonas/fisiología , Virulencia , Factores de Virulencia , Xanthomonas/metabolismo , Xanthomonas/patogenicidad , Xanthomonas/fisiología
9.
Mol Microbiol ; 83(1): 195-207, 2012 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-22111898

RESUMEN

Stewartan and amylovoran exopolysaccharide (EPS) produced by the plant pathogenic bacteria Pantoea stewartii and Erwinia amylovora are virulence factors in the cause of Stewart's vascular wilt and fire blight. The biosynthesis of amylovoran and stewartan is encoded by a set of homologous operons that have been partially characterized, although some annotations are solely on the basis of sequence homology. The major distinguishing features of these two EPS forms are the presence of a terminal pyruvate in amylovoran and glucose in stewartan, even though the gene systems to account for both are conserved and present in each bacterium. This study explores the genetic, structural and functional differences of amylovoran and stewartan, and their potential role in host adaptation. We report that the pyruvyl transferase gene in P. stewartii is non-functional, while the terminal glucosyl transferase is catalytically active. Conversely, in E. amylovora, the homologous glucosyl transferase activity appears to be relatively ineffective, while the pyruvyl transferase function predominates. We also show that the terminally pyruvylated versus glucosylated EPS require specific repeating unit translocases (Wzx). We discuss the evolutionary, functional and biological implications of the terminally pyruvylated and glucosylated polymers and their potential contribution to plant and insect host adaptation.


Asunto(s)
Erwinia/genética , Pantoea/genética , Enfermedades de las Plantas/microbiología , Polisacáridos Bacterianos/biosíntesis , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Secuencia de Carbohidratos , Erwinia/metabolismo , Erwinia/patogenicidad , Malus/microbiología , Datos de Secuencia Molecular , Operón , Pantoea/metabolismo , Pantoea/patogenicidad , Polisacáridos Bacterianos/química , Alineación de Secuencia , Virulencia , Zea mays/microbiología
10.
Phytopathology ; 103(9): 900-5, 2013 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-23927426

RESUMEN

The causal agent of cucurbit bacterial wilt, Erwinia tracheiphila, has a wide host range in the family Cucurbitaceae, including economically important crops such as muskmelon (Cucumis melo), cucumber (C. sativus), and squash (Cucurbita spp.). Genetic variability of 69 E. tracheiphila strains was investigated by repetitive-element polymerase chain reaction (rep-PCR) using BOXA1R and ERIC1-2 primers. Fingerprint profiles revealed significant variability associated with crop host; strains isolated from Cucumis spp. were clearly distinguishable from Cucurbita spp.-isolated strains regardless of geographic origin. Twelve E. tracheiphila strains isolated from muskmelon, cucumber, or summer squash were inoculated onto muskmelon and summer squash seedlings, followed by incubation in a growth chamber. Wilt symptoms were assessed over 3 weeks, strains were reisolated, and rep-PCR profiles were compared with the inoculated strains. Wilting occurred significantly faster when seedlings were inoculated with strains that originated from the same crop host genus (P<0.001). In the first run of the experiment, cucumber and muskmelon strains caused wilting on muskmelon seedlings at a median of 7.8 and 5.6 days after inoculation (dai), respectively. Summer squash seedlings wilted 18.0, 15.7, and 5.7 dai when inoculated with muskmelon-, cucumber-, and squash-origin strains, respectively. In a second run of the experiment, cucumber and muskmelon strains caused wilting on muskmelon at 7.0 and 6.9 dai, respectively, whereas summer squash seedlings wilted at 23.6, 29.0 and 9.0 dai when inoculated with muskmelon-, cucumber-, and squash-origin strains, respectively. Our results provide the first evidence of genetic diversity within E. tracheiphila and suggest that strain specificity is associated with plant host. This advance is a first step toward understanding the genetic and population structure of E. tracheiphila.


Asunto(s)
Cucurbitaceae/microbiología , Erwinia/genética , Variación Genética , Genoma Bacteriano/genética , Enfermedades de las Plantas/microbiología , Cucumis/microbiología , Cucurbita/microbiología , Dermatoglifia del ADN , ADN Bacteriano/genética , Erwinia/aislamiento & purificación , Erwinia/patogenicidad , Geografía , Estados Unidos , Virulencia
11.
World J Microbiol Biotechnol ; 29(3): 411-20, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23117674

RESUMEN

Erwinia carotovora subsp. carotovora (Ecc), the causal agent of bacterial soft rot, is one of the destructive pathogens of postharvest vegetables. In this study, a bacterial isolate (BGP20) from the vegetable farm soil showed strong antagonistic activity against Ecc in vitro, and its twofold cell-free culture filtrate showed excellent biocontrol effect in controlling the postharvest bacterial soft rot of potatoes at 25 °C. The anti-Ecc metabolites produced by the isolate BGP20 had a high resistance to high temperature, UV-light and protease K. Based on the colonial morphology, cellular morphology, sporulation, and partial nucleotide sequences of 16S rRNA and gyrB gene, the isolate BGP20 was identified as Bacillus amyloliquefaciens subsp. plantarum. Further in vivo assays showed that the BGP20 cell culture was more effective in controlling the postharvest bacterial soft rot of green peppers and Chinese cabbages than its twofold cell-free culture filtrate. In contrast, the biocontrol effect and safety of the BGP20 cell culture were very poor on potatoes. In the wounds of potatoes treated with both the antagonist BGP20 and the pathogen Ecc, the viable count of Ecc was 31,746 times that of BGP20 at 48 h of incubation at 25 °C. But in the wounds of green peppers, the viable count of BGP20 increased 182.3 times within 48 h, and that of Ecc increased only 51.3 %. In addition, the treatment with both BGP20 and Ecc induced higher activity of phenylalanine ammonia-lyase (PAL) than others in potatoes. But the same treatment did not induce an increase of PAL activity in green peppers. In conclusion, the present study demonstrated that the isolate BGP20 is a promising candidate in biological control of postharvest bacterial soft rot of vegetables, but its main mode of action is different among various vegetables.


Asunto(s)
Antibiosis , Bacillus/crecimiento & desarrollo , Erwinia/patogenicidad , Control Biológico de Vectores , Enfermedades de las Plantas/prevención & control , Verduras/microbiología , Bacillus/clasificación , Brassica/microbiología , Capsicum/microbiología , Recuento de Colonia Microbiana , Girasa de ADN/genética , Erwinia/efectos de los fármacos , Erwinia/crecimiento & desarrollo , Viabilidad Microbiana , Fenilanina Amoníaco-Liasa/genética , Fenilanina Amoníaco-Liasa/metabolismo , Fenilanina Amoníaco-Liasa/farmacología , Enfermedades de las Plantas/microbiología , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Solanum tuberosum/microbiología
12.
Plant Biotechnol J ; 10(3): 313-27, 2012 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-22077160

RESUMEN

Broad spectrum protection against different insects and pathogens requires multigene engineering. However, such broad spectrum protection against biotic stress is provided by a single protein in some medicinal plants. Therefore, tobacco chloroplasts were transformed with the agglutinin gene from Pinellia ternata (pta), a widely cultivated Chinese medicinal herb. Pinellia ternata agglutinin (PTA) was expressed up to 9.2% of total soluble protein in mature leaves. Purified PTA showed similar hemagglutination activity as snowdrop lectin. Artificial diet with purified PTA from transplastomic plants showed marked and broad insecticidal activity. In planta bioassays conducted with T0 or T1 generation PTA lines showed that the growth of aphid Myzus persicae (Sulzer) was reduced by 89%-92% when compared with untransformed (UT) plants. Similarly, the larval survival and total population of whitefly (Bemisia tabaci) on transplastomic lines were reduced by 91%-93% when compared with UT plants. This is indeed the first report of lectin controlling whitefly infestation. When transplastomic PTA leaves were fed to corn earworm (Helicoverpa zea), tobacco budworm (Heliothis virescens) or the beet armyworm (spodoptera exigua), 100% mortality was observed against all these three insects. In planta bioassays revealed Erwinia population to be 10,000-fold higher in control than in PTA lines. Similar results were observed with tobacco mosaic virus (TMV) challenge. Therefore, broad spectrum resistance to homopteran (sap-sucking), Lepidopteran insects as well as anti-bacterial or anti-viral activity observed in PTA lines provides a new option to engineer protection against biotic stress by hyper-expression of an unique protein that is naturally present in a medicinal plant.


Asunto(s)
Aglutininas/farmacología , Áfidos/efectos de los fármacos , Cloroplastos/metabolismo , Resistencia a la Enfermedad , Pinellia/química , Aglutininas/química , Animales , Antibacterianos/química , Antibacterianos/farmacología , Antivirales/química , Antivirales/farmacología , Cloroplastos/genética , Erwinia/patogenicidad , Fertilidad , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Vectores Genéticos/genética , Vectores Genéticos/metabolismo , Genoma del Cloroplasto , Hemaglutinación , Insecticidas/química , Insecticidas/farmacología , Lepidópteros/efectos de los fármacos , Control Biológico de Vectores/métodos , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/virología , Hojas de la Planta/genética , Hojas de la Planta/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/metabolismo , Plantas Modificadas Genéticamente/genética , Plantas Modificadas Genéticamente/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Solubilidad , Nicotiana/genética , Nicotiana/metabolismo , Virus del Mosaico del Tabaco/patogenicidad , Transgenes
13.
Viruses ; 13(7)2021 06 25.
Artículo en Inglés | MEDLINE | ID: mdl-34202208

RESUMEN

Species belonging to the genus Erwinia are predominantly plant pathogens. A number of bacteriophages capable of infecting Erwinia have been used for the control of plant diseases such as fire blight. Public repositories provide the complete genome information for such phages, which includes genomes ranging from 30 kb to 350 kb in size. However, limited information is available regarding bacteriophages belonging to the family Siphoviridae. A novel lytic siphophage, pEp_SNUABM_08, which specifically infects Erwinia pyrifoliae, was isolated from the soil of an affected apple orchard in South Korea. A comprehensive genome analysis was performed using the Erwinia-infecting siphophage. The whole genome of pEp_SNUABM_08 comprised 62,784 bp (GC content, 57.24%) with 79 open reading frames. The genomic characteristics confirmed that pEp_SNUABM_08 is a singleton lytic bacteriophage belonging to the family Siphoviridae, and no closely related phages have been reported thus far. Our study not only characterized a unique phage, but also provides insight into the genetic diversity of Erwinia bacteriophages.


Asunto(s)
Erwinia/virología , Especificidad del Huésped , Siphoviridae/genética , Siphoviridae/fisiología , ADN Viral/genética , Erwinia/patogenicidad , Genoma Viral , Genómica , Secuenciación de Nucleótidos de Alto Rendimiento , República de Corea , Análisis de Secuencia de ADN , Siphoviridae/clasificación , Siphoviridae/aislamiento & purificación , Microbiología del Suelo
14.
BMC Genomics ; 11: 2, 2010 Jan 04.
Artículo en Inglés | MEDLINE | ID: mdl-20047678

RESUMEN

BACKGROUND: Erwinia pyrifoliae is a newly described necrotrophic pathogen, which causes fire blight on Asian (Nashi) pear and is geographically restricted to Eastern Asia. Relatively little is known about its genetics compared to the closely related main fire blight pathogen E. amylovora. RESULTS: The genome of the type strain of E. pyrifoliae strain DSM 12163T, was sequenced using both 454 and Solexa pyrosequencing and annotated. The genome contains a circular chromosome of 4.026 Mb and four small plasmids. Based on their respective role in virulence in E. amylovora or related organisms, we identified several putative virulence factors, including type III and type VI secretion systems and their effectors, flagellar genes, sorbitol metabolism, iron uptake determinants, and quorum-sensing components. A deletion in the rpoS gene covering the most conserved region of the protein was identified which may contribute to the difference in virulence/host-range compared to E. amylovora. Comparative genomics with the pome fruit epiphyte Erwinia tasmaniensis Et1/99 showed that both species are overall highly similar, although specific differences were identified, for example the presence of some phage gene-containing regions and a high number of putative genomic islands containing transposases in the E. pyrifoliae DSM 12163T genome. CONCLUSIONS: The E. pyrifoliae genome is an important addition to the published genome of E. tasmaniensis and the unfinished genome of E. amylovora providing a foundation for re-sequencing additional strains that may shed light on the evolution of the host-range and virulence/pathogenicity of this important group of plant-associated bacteria.


Asunto(s)
Erwinia/genética , Genoma Bacteriano , Enfermedades de las Plantas/microbiología , Hibridación Genómica Comparativa , ADN Bacteriano/genética , Erwinia/patogenicidad , Islas Genómicas , Datos de Secuencia Molecular , Plásmidos , Análisis de Secuencia de ADN , Programas Informáticos , Factores de Virulencia/genética
15.
BMC Genomics ; 11: 393, 2010 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-20565991

RESUMEN

BACKGROUND: The genus Erwinia includes plant-associated pathogenic and non-pathogenic Enterobacteria. Important pathogens such as Erwinia amylovora, the causative agent of fire blight and E. pyrifoliae causing bacterial shoot blight of pear in Asia belong to this genus. The species E. tasmaniensis and E. billingiae are epiphytic bacteria and may represent antagonists for biocontrol of fire blight. The presence of genes that are putatively involved in virulence in E. amylovora and E. pyrifoliae is of special interest for these species in consequence. RESULTS: Here we provide the complete genome sequences of the pathogenic E. pyrifoliae strain Ep1/96 with a size of 4.1 Mb and of the non-pathogenic species E. billingiae strain Eb661 with a size of 5.4 Mb, de novo determined by conventional Sanger sequencing and next generation sequencing techniques. Genome comparison reveals large inversions resulting from homologous recombination events. Furthermore, comparison of deduced proteins highlights a relation of E. billingiae strain Eb661 to E. tasmaniensis strain Et1/99 and a distance to E. pyrifoliae for the overall gene content as well as for the presence of encoded proteins representing virulence factors for the pathogenic species. Pathogenicity of E. pyrifoliae is supposed to have evolved by accumulation of potential virulence factors. E. pyrifoliae carries factors for type III secretion and cell invasion. Other genes described as virulence factors for E. amylovora are involved in the production of exopolysaccharides, the utilization of plant metabolites such as sorbitol and sucrose. Some virulence-associated genes of the pathogenic species are present in E. tasmaniensis but mostly absent in E. billingiae. CONCLUSION: The data of the genome analyses correspond to the pathogenic lifestyle of E. pyrifoliae and underlines the epiphytic localization of E. tasmaniensis and E. billingiae as a saprophyte.


Asunto(s)
Erwinia/genética , Genoma Bacteriano/genética , Genómica , Enfermedades de las Plantas/microbiología , Pyrus/microbiología , Animales , Bases de Datos Genéticas , Erwinia/metabolismo , Erwinia/patogenicidad , Datos de Secuencia Molecular , Análisis de Secuencia de ADN , Factores de Virulencia/genética
16.
Sci Rep ; 10(1): 21743, 2020 12 10.
Artículo en Inglés | MEDLINE | ID: mdl-33303810

RESUMEN

Erwinia tracheiphila is a bacterial plant pathogen that causes a fatal wilt infection in some cucurbit crop plants. Wilt symptoms are thought to be caused by systemic bacterial colonization through xylem that impedes sap flow. However, the genetic determinants of within-plant movement are unknown for this pathogen species. Here, we find that E. tracheiphila has horizontally acquired an operon with a microbial expansin (exlx) gene adjacent to a glycoside hydrolase family 5 (gh5) gene. Plant inoculation experiments with deletion mutants in the individual genes (Δexlx and Δgh5) and the full operon (Δexlx-gh5) resulted in decreased severity of wilt symptoms, decreased mortality rate, and impaired systemic colonization compared to the Wt strain. Co-inoculation experiments with Wt and Δexlx-gh5 rescued the movement defect of the mutant strain, suggesting that expansin and GH5 function extracellularly. Together, these results show that expansin-GH5 contributes to systemic movement through xylem, leading to rapid wilt symptom development and higher rates of plant death. The presence of expansin genes in diverse species of bacterial and fungal wilt-inducing pathogens suggests that microbial expansin proteins may be an under-appreciated virulence factor for many pathogen species.


Asunto(s)
Cucurbita/genética , Cucurbita/microbiología , Erwinia/genética , Erwinia/patogenicidad , Enfermedades de las Plantas/genética , Enfermedades de las Plantas/microbiología , Proteínas de Plantas/genética , Interacciones Microbiota-Huesped , Operón/genética , Virulencia , Factores de Virulencia , Xilema
17.
Science ; 257(5066): 85-8, 1992 Jul 03.
Artículo en Inglés | MEDLINE | ID: mdl-1621099

RESUMEN

A proteinaceous elicitor of the plant defense reaction known as the hypersensitive response was isolated from Erwinia amylovora, the bacterium that causes fire blight of pear, apple, and other rosaceous plants. The elicitor, named harpin, is an acidic, heat-stable, cell-envelope-associated protein with an apparent molecular weight of 44 kilodaltons. Harpin caused tobacco leaf lamina to collapse and caused an increase in the pH of bathing solutions of suspension-cultured tobacco cells. The gene encoding harpin (hrpN) was located in the 40-kilobase hrp gene cluster of E. amylovora, sequenced, and mutated with Tn5tac1. The hrpN mutants were not pathogenic to pear, did not elicit the hypersensitive response, and did not produce harpin.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa , Proteínas Bacterianas/genética , Erwinia/fisiología , Genes Bacterianos , Proteínas de la Membrana/genética , Familia de Multigenes , Secuencia de Aminoácidos , Proteínas Bacterianas/aislamiento & purificación , Proteínas Bacterianas/metabolismo , Células Cultivadas , Erwinia/genética , Erwinia/patogenicidad , Escherichia coli/genética , Proteínas de la Membrana/aislamiento & purificación , Proteínas de la Membrana/metabolismo , Datos de Secuencia Molecular , Plantas Tóxicas , Mapeo Restrictivo , Nicotiana/microbiología
18.
Lett Appl Microbiol ; 48(3): 324-30, 2009 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-19187512

RESUMEN

AIMS: Bacterial shoot blight of pear in Japan (BSBP) is caused by Erwinia strains which were formerly associated with the species Erwinia amylovora, the causative agent of fire blight. The description of Erwinia pyrifoliae as a pear pathogen in Korea renewed a possible connection of the pear pathogens in both countries. METHODS AND RESULTS: Nucleotide sequence analysis of the 16S rRNA, the house keeping genes gpd and recA, as well as DNA-DNA hybridization kinetics and microbiological assays place the pear pathogens from Japan into the species E. pyrifoliae described as the causative agent of Asian pear blight in Korea. CONCLUSIONS: Erwinia pyrifoliae strains from Korea and the pear pathogenic Erwinia strains from Japan belong taxonomically into the same species, but show slight divergences in nucleotide sequences used for classification. The allocation is not only supported by microbiological properties, but also by a host range restricted to pear observed before by others. SIGNIFICANCE AND IMPACT OF THE STUDY: The data suggest that the BSBP disease observed at the island of Hokkaido was not fire blight and unify BSBP in Japan with the pear pathogenic species E. pyrifoliae from Korea.


Asunto(s)
Erwinia , Glucosafosfato Deshidrogenasa/genética , Enfermedades de las Plantas/microbiología , Pyrus/microbiología , ARN Ribosómico 16S/genética , Rec A Recombinasas/genética , ADN Bacteriano/análisis , ADN Bacteriano/genética , Erwinia/clasificación , Erwinia/genética , Erwinia/aislamiento & purificación , Erwinia/patogenicidad , Japón , Datos de Secuencia Molecular , Hibridación de Ácido Nucleico , Filogenia , Análisis de Secuencia de ADN
19.
Sci Rep ; 9(1): 2818, 2019 02 26.
Artículo en Inglés | MEDLINE | ID: mdl-30808981

RESUMEN

Erwinia amylovora is the etiological agent of fire blight, a devastating disease which is a global threat to commercial apple and pear production. The Erwinia genus includes a wide range of different species belonging to plant pathogens, epiphytes and even opportunistic human pathogens. The aim of the present study is to understand, within the Erwinia genus, the genetic differences between phytopathogenic strains and those strains not reported to be phytopathogenic. The genes related to the hydroxamate siderophores iron uptake have been considered due to their potential druggability. In E. amylovora siderophore-mediated iron acquisition plays a relevant role in the progression of Fire blight. Here we analyzed the taxonomic relations within Erwinia genus and the relevance of the genes related to the siderophore-mediated iron uptake pathway. The results of this study highlight the presence of a well-defined sub-group of Rosaceae infecting species taxonomically and genetically related with a high number of conserved core genes. The analysis of the complete ferrioxamine transport system has led to the identification of two genes exclusively present in the Rosaceae infecting strains.


Asunto(s)
Deferoxamina/metabolismo , Erwinia/genética , Erwinia/metabolismo , Hierro/metabolismo , Infecciones por Enterobacteriaceae , Erwinia/patogenicidad , Compuestos Férricos/metabolismo , Genoma Bacteriano , Genómica , Ácidos Hidroxámicos/metabolismo , Filogenia , Enfermedades de las Plantas , Rosaceae/microbiología , Análisis de Secuencia de ADN , Sideróforos/metabolismo , Virulencia
20.
PLoS One ; 14(12): e0224431, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-31841519

RESUMEN

Dieback disease caused by Erwinia mallotivora is a major threat to papaya plantation in Malaysia. The current study was conducted to evaluate the potential of endophytic lactic acid bacteria (LAB) isolated from papaya seeds for disease suppression of papaya dieback. Two hundred and thirty isolates were screened against E. mallotivora BT-MARDI, and the inhibitory activity of the isolates against the pathogen was ranging from 11.7-23.7 mm inhibition zones. The synergistic experiments revealed that combination of W. cibaria PPKSD19 and Lactococcus lactis subsp. lactis PPSSD39 increased antibacterial activity against the pathogen. The antibacterial activity was partially due to the production of bacteriocin-like inhibitory substances (BLIS). The nursery experiment confirmed that the application of bacterial consortium W. cibaria PPKSD19 and L. lactis subsp. lactis PPSSD39 significantly reduced disease severity to 19% and increased biocontrol efficacy to 69% of infected papaya plants after 18 days of treatment. This study showed that W. cibaria PPKSD19 and L. lactis subsp. lactis PPSSD39 are potential candidate as biocontrol agents against papaya dieback disease.


Asunto(s)
Bacteriocinas/farmacología , Carica/efectos de los fármacos , Erwinia/efectos de los fármacos , Antibacterianos , Antibiosis/efectos de los fármacos , Bacterias/efectos de los fármacos , Fenómenos Biológicos , Carica/metabolismo , Erwinia/patogenicidad , Microbiología de Alimentos , Lactobacillales/efectos de los fármacos , Malasia , Semillas/efectos de los fármacos
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