Reference transcriptome assembly and annotation for perennial ryegrass.
Genome
; 60(12): 1086-1088, 2017 Dec.
Article
en En
| MEDLINE
| ID: mdl-28841400
ABSTRACT
RNA-Seq methodology has been used to generate a comprehensive transcriptome sequence resource for perennial ryegrass, an important temperate pasture grass species. A total of 931 547 255 reads were obtained from libraries corresponding to 19 distinct tissue samples, including both vegetative and reproductive stages of development. Assembly of data generated a final filtered reference set of 48 713 contigs and scaffolds. The transcriptome resource will support whole genome sequence assembly, comparative genomics, implementation of genotyping-by-sequencing (GBS) methods based on transcript sampling, and identification of candidate genes for multiple biological functions.
Palabras clave
Texto completo:
1
Colección:
01-internacional
Banco de datos:
MEDLINE
Asunto principal:
Lolium
/
Genoma de Planta
/
Mapeo Contig
/
Transcriptoma
Tipo de estudio:
Prognostic_studies
Idioma:
En
Revista:
Genome
Asunto de la revista:
GENETICA
Año:
2017
Tipo del documento:
Article
País de afiliación:
Australia