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Reclassification of Haloactinobacterium glacieicola as Occultella glacieicola gen. nov., comb. nov., of Haloactinobacterium album as Ruania alba comb. nov, with an emended description of the genus Ruania, recognition that the genus names Haloactinobacterium and Ruania are heterotypic synonyms and description of Occultella aeris sp. nov., a halotolerant isolate from surface soil sampled at an ancient copper smelter.
Schumann, Peter; Kalensee, Franziska; Cao, Jialan; Criscuolo, Alexis; Clermont, Dominique; Köhler, Johann Michael; Meier-Kolthoff, Jan P; Neumann-Schaal, Meina; Tindall, Brian J; Pukall, Rüdiger.
Afiliación
  • Schumann P; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124 Braunschweig, Germany.
  • Kalensee F; Present address: Universitätsklinikum Frankfurt, Theodor-Stern-Kai 7, D-60590 Frankfurt, Germany.
  • Cao J; TU Ilmenau, Institute of Micro- and Nanotechnologies/ Institute of Chemistry and Biotechnology, Prof.-Schmidt-Straße 26, D-98693 Ilmenau, Germany.
  • Criscuolo A; TU Ilmenau, Institute of Micro- and Nanotechnologies/ Institute of Chemistry and Biotechnology, Prof.-Schmidt-Straße 26, D-98693 Ilmenau, Germany.
  • Clermont D; Hub de Bioinformatique et Biostatistique ‒ Département Biologie Computationnelle, Institut Pasteur, USR 3756 CNRS, Paris, France.
  • Köhler JM; Institut Pasteur - CIP - Collection of Institut Pasteur, Paris, France.
  • Meier-Kolthoff JP; TU Ilmenau, Institute of Micro- and Nanotechnologies/ Institute of Chemistry and Biotechnology, Prof.-Schmidt-Straße 26, D-98693 Ilmenau, Germany.
  • Neumann-Schaal M; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124 Braunschweig, Germany.
  • Tindall BJ; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124 Braunschweig, Germany.
  • Pukall R; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, 38124 Braunschweig, Germany.
Article en En | MEDLINE | ID: mdl-33835911
In the course of screening the surface soils of ancient copper mines and smelters (East Harz, Germany) an aerobic, non-motile and halotolerant actinobacterium forming small rods or cocci was isolated. The strain designated F300T developed creamy to yellow colonies on tryptone soy agar and grew optimally at 28 °C, pH 7-8 and with 0.5-2 % (m/v) NaCl. Its peptidoglycan was of type A4α l-Lys-l-Glu (A11.54). The menaquinone profile was dominated by MK-8(II, III-H4) and contained minor amounts of MK-8(H2), MK-8(H6) and MK-9(H4). The polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, mono and diacylated phosphatidylinositol dimannosides, and components that were not fully characterized, including two phospholipids, two glycolipids and an uncharacterized lipid. Major whole-cell sugars were rhamnose and ribose. The fatty acid profile contained mainly iso and anteiso branched fatty acids (anteiso-C15 : 0, iso-C14 : 0) and aldehydes/dimethylacetals (i.e. not fatty acids). Sequence analysis of its genomic DNA and subsequent analysis of the data placed the isolate in the group currently defined by members of the genera Ruania and Haloactinobacterium (family Ruaniaceae, order Micrococcales) as a sister taxon to the previously described species Haloactinobacterium glacieicola, sharing an average nucleotide identity and average amino acid identity values of 85.3 and 85.7 %, respectively. Genotypic and chemotaxonomic analyses support the view that strain F300T (=DSM 108350T=CIP 111667T) is the type strain of a new genus and new species for which the name Occultella aeris gen. nov., sp. nov. is proposed. Based on revised chemotaxonomic and additional genome based data, it is necessary to discuss and evaluate the results in the light of the classification and nomenclature of members of the family Ruaniaceae, i.e. the genera Haloactinobacterium and Ruania. Consequently, the reclassification of Haloactinobacterium glacieicola as Occultella glacieicola comb. nov. and Haloactinobacterium album as Ruania alba comb. nov., with an emended description of the genus Ruania are proposed.
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Filogenia / Microbiología del Suelo / Actinobacteria / Cobre País/Región como asunto: Europa Idioma: En Revista: Int J Syst Evol Microbiol Asunto de la revista: MICROBIOLOGIA Año: 2021 Tipo del documento: Article País de afiliación: Alemania

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Filogenia / Microbiología del Suelo / Actinobacteria / Cobre País/Región como asunto: Europa Idioma: En Revista: Int J Syst Evol Microbiol Asunto de la revista: MICROBIOLOGIA Año: 2021 Tipo del documento: Article País de afiliación: Alemania