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Innovation, conservation, and repurposing of gene function in root cell type development.
Kajala, Kaisa; Gouran, Mona; Shaar-Moshe, Lidor; Mason, G Alex; Rodriguez-Medina, Joel; Kawa, Dorota; Pauluzzi, Germain; Reynoso, Mauricio; Canto-Pastor, Alex; Manzano, Concepcion; Lau, Vincent; Artur, Mariana A S; West, Donnelly A; Gray, Sharon B; Borowsky, Alexander T; Moore, Bryshal P; Yao, Andrew I; Morimoto, Kevin W; Bajic, Marko; Formentin, Elide; Nirmal, Niba A; Rodriguez, Alan; Pasha, Asher; Deal, Roger B; Kliebenstein, Daniel J; Hvidsten, Torgeir R; Provart, Nicholas J; Sinha, Neelima R; Runcie, Daniel E; Bailey-Serres, Julia; Brady, Siobhan M.
Afiliación
  • Kajala K; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA; Plant Ecophysiology, Institute of Environmental Biology, Utrecht University, 3584 Utrecht, the Netherlands.
  • Gouran M; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA; Plant Biology Graduate Group, University of California, Davis, Davis, CA 95616, USA.
  • Shaar-Moshe L; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Mason GA; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Rodriguez-Medina J; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA; Integrative Genetics and Genomics Graduate Group, University of California, Davis, Davis, CA 95616, USA.
  • Kawa D; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Pauluzzi G; Center for Plant Cell Biology, Department of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.
  • Reynoso M; Center for Plant Cell Biology, Department of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA; IBBM, FCE-UNLP CONICET, La Plata 1900, Argentina.
  • Canto-Pastor A; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Manzano C; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Lau V; Department of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, 25 Willcocks St., Toronto, ON M5S 3B2, Canada.
  • Artur MAS; Plant Ecophysiology, Institute of Environmental Biology, Utrecht University, 3584 Utrecht, the Netherlands.
  • West DA; Integrative Genetics and Genomics Graduate Group, University of California, Davis, Davis, CA 95616, USA; Department of Plant Biology, University of California, Davis, Davis, CA 95616, USA.
  • Gray SB; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Borowsky AT; Center for Plant Cell Biology, Department of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.
  • Moore BP; Fort Valley State University, Fort Valley, GA 31030, USA.
  • Yao AI; Department of Biomedical Engineering and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Morimoto KW; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Bajic M; Department of Biology, Emory University, Atlanta, GA 30322, USA.
  • Formentin E; Center for Plant Cell Biology, Department of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA; Department of Biology, University of Padova, Padova, Italy.
  • Nirmal NA; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Rodriguez A; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
  • Pasha A; Department of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, 25 Willcocks St., Toronto, ON M5S 3B2, Canada.
  • Deal RB; Department of Biology, Emory University, Atlanta, GA 30322, USA.
  • Kliebenstein DJ; Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA.
  • Hvidsten TR; Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432 Ås, Norway.
  • Provart NJ; Department of Cell and Systems Biology/Centre for the Analysis of Genome Evolution and Function, University of Toronto, 25 Willcocks St., Toronto, ON M5S 3B2, Canada.
  • Sinha NR; Department of Plant Biology, University of California, Davis, Davis, CA 95616, USA.
  • Runcie DE; Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA.
  • Bailey-Serres J; Plant Ecophysiology, Institute of Environmental Biology, Utrecht University, 3584 Utrecht, the Netherlands; Center for Plant Cell Biology, Department of Botany and Plant Sciences, University of California, Riverside, Riverside, CA 92521, USA.
  • Brady SM; Department of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA. Electronic address: sbrady@ucdavis.edu.
Cell ; 184(12): 3333-3348.e19, 2021 06 10.
Article en En | MEDLINE | ID: mdl-34010619
ABSTRACT
Plant species have evolved myriads of solutions, including complex cell type development and regulation, to adapt to dynamic environments. To understand this cellular diversity, we profiled tomato root cell type translatomes. Using xylem differentiation in tomato, examples of functional innovation, repurposing, and conservation of transcription factors are described, relative to the model plant Arabidopsis. Repurposing and innovation of genes are further observed within an exodermis regulatory network and illustrate its function. Comparative translatome analyses of rice, tomato, and Arabidopsis cell populations suggest increased expression conservation of root meristems compared with other homologous populations. In addition, the functions of constitutively expressed genes are more conserved than those of cell type/tissue-enriched genes. These observations suggest that higher order properties of cell type and pan-cell type regulation are evolutionarily conserved between plants and animals.
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Genes de Plantas / Arabidopsis / Solanum lycopersicum / Raíces de Plantas / Invenciones Tipo de estudio: Prognostic_studies Idioma: En Revista: Cell Año: 2021 Tipo del documento: Article País de afiliación: Países Bajos
Texto completo
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Genes de Plantas / Arabidopsis / Solanum lycopersicum / Raíces de Plantas / Invenciones Tipo de estudio: Prognostic_studies Idioma: En Revista: Cell Año: 2021 Tipo del documento: Article País de afiliación: Países Bajos