Genomic characterization of the dominating Beta, V2 variant carrying vaccinated (Oxford-AstraZeneca) and nonvaccinated COVID-19 patient samples in Bangladesh: A metagenomics and whole-genome approach.

Rahaman, Md Mizanur; Sarkar, Md Murshed Hasan; Rahman, M Shaminur; Islam, M Rafiul; Islam, Israt; Saha, Otun; Akter, Shahina; Banu, Tanjian Akhtar; Jahan, Iffat; Habib, Md Ahasan; Goswami, Barna; Bari, Latiful; Malek, Md Abdul; Khan, Md Salim

Genomic characterization of the dominating Beta, V2 variant carrying vaccinated (Oxford-AstraZeneca) and nonvaccinated COVID-19 patient samples in Bangladesh: A metagenomics and whole-genome approach.

Rahaman, Md Mizanur; Sarkar, Md Murshed Hasan; Rahman, M Shaminur; Islam, M Rafiul; Islam, Israt; Saha, Otun; Akter, Shahina; Banu, Tanjian Akhtar; Jahan, Iffat; Habib, Md Ahasan; Goswami, Barna; Bari, Latiful; Malek, Md Abdul; Khan, Md Salim.

Afiliación

Rahaman MM; Department of Microbiology, University of Dhaka, Dhaka, Bangladesh.
Sarkar MMH; Genomics Research Laboratory, Bangladesh Council of Scientific and Industrial Research, BCSIR, Dhaka, Bangladesh.
Rahman MS; Department of Microbiology, Jashore University of Science and Technology, Jashore, Bangladesh.
Islam MR; Department of Microbiology, University of Dhaka, Dhaka, Bangladesh.
Islam I; Department of Microbiology, University of Dhaka, Dhaka, Bangladesh.
Saha O; Department of Microbiology, University of Dhaka, Dhaka, Bangladesh.
Akter S; Genomics Research Laboratory, Bangladesh Council of Scientific and Industrial Research, BCSIR, Dhaka, Bangladesh.
Banu TA; Genomics Research Laboratory, Bangladesh Council of Scientific and Industrial Research, BCSIR, Dhaka, Bangladesh.
Jahan I; Genomics Research Laboratory, Bangladesh Council of Scientific and Industrial Research, BCSIR, Dhaka, Bangladesh.
Habib MA; Genomics Research Laboratory, Bangladesh Council of Scientific and Industrial Research, BCSIR, Dhaka, Bangladesh.
Goswami B; Genomics Research Laboratory, Bangladesh Council of Scientific and Industrial Research, BCSIR, Dhaka, Bangladesh.
Bari L; Centre for Advanced Research in Sciences, University of Dhaka, Dhaka, Bangladesh.
Malek MA; Department of Microbiology, University of Dhaka, Dhaka, Bangladesh.
Khan MS; Centre for Advanced Research in Sciences, University of Dhaka, Dhaka, Bangladesh.

J Med Virol ; 94(4): 1670-1688, 2022 04.

Article en En | MEDLINE | ID: mdl-34939673

Asunto(s)

COVID-19/virología; ChAdOx1 nCoV-19/administración & dosificación; Metagenómica; SARS-CoV-2/genética; Adolescente; Adulto; Anciano; Bacterias/clasificación; Bacterias/genética; Infecciones Bacterianas/epidemiología; Infecciones Bacterianas/microbiología; Infecciones Bacterianas/virología; Bangladesh/epidemiología; COVID-19/epidemiología; COVID-19/microbiología; COVID-19/prevención & control; Coinfección/epidemiología; Coinfección/microbiología; Coinfección/virología; Farmacorresistencia Bacteriana/genética; Femenino; Genoma Bacteriano/genética; Genoma Viral/genética; Humanos; Masculino; Microbiota/genética; Persona de Mediana Edad; Mutación; Filogenia; SARS-CoV-2/clasificación; SARS-CoV-2/aislamiento & purificación; Selección Genética; Vacunación; Proteínas Virales/genética; Adulto Joven

Palabras clave

SARS-CoV-2; antimicrobial resistance gene (AMR); coinfection; metatranscriptomics (mRNA); variants

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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Metagenómica / SARS-CoV-2 / COVID-19 / ChAdOx1 nCoV-19 País/Región como asunto: Asia Idioma: En Revista: J Med Virol Año: 2022 Tipo del documento: Article País de afiliación: Bangladesh

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