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1.
Biochem Biophys Res Commun ; 722: 150152, 2024 Aug 30.
Artículo en Inglés | MEDLINE | ID: mdl-38795452

RESUMEN

MicroRNAs (miRNAs) can positively regulate gene expression through an unconventional RNA activation mechanism involving direct targeting 3' untranslated regions (UTRs). Our prior study found miR-93-5p activates mitogen-activated protein kinase kinase kinase 2 (MAP3K2) in hepatocellular carcinoma (HCC) via its 3'UTR. However, the underlying mechanism remains elusive. Here, we identified two candidate AU-rich element (ARE) motifs (ARE1 and ARE2) adjacent to the miR-93-5p binding site located within the MAP3K2 3'UTR using AREsite2. Luciferase reporter and translation assays validated that only ARE2 participated in MAP3K2 activation. Integrative analysis revealed that human antigen R (HuR), an ARE2-associated RNA-binding protein (RBP), physically and functionally interacted with the MAP3K2 3'UTR. Consequently, an HuR-ARE2 complex was shown to facilitate miR-93-5p-mediated upregulation of MAP3K2 expression. Furthermore, bioinformatics analysis and studies of HCC cells and specimens highlighted an oncogenic role for HuR and positive HuR-MAP3K2 expression correlation. HuR is also an enhancing factor in the positive feedback circuit comprising miR-93-5p, MAP3K2, and c-Jun demonstrated in our prior study. The newly identified HuR-ARE2 involvement enriches the mechanism of miR-93-5p-driven MAP3K2 activation and suggests new therapeutic strategies warranted for exploration in HCC.


Asunto(s)
Regiones no Traducidas 3' , Carcinoma Hepatocelular , Proteína 1 Similar a ELAV , Regulación Neoplásica de la Expresión Génica , Neoplasias Hepáticas , MAP Quinasa Quinasa Quinasa 2 , MicroARNs , Humanos , MicroARNs/genética , MicroARNs/metabolismo , Carcinoma Hepatocelular/genética , Carcinoma Hepatocelular/metabolismo , Carcinoma Hepatocelular/patología , Neoplasias Hepáticas/genética , Neoplasias Hepáticas/metabolismo , Neoplasias Hepáticas/patología , Regiones no Traducidas 3'/genética , MAP Quinasa Quinasa Quinasa 2/metabolismo , MAP Quinasa Quinasa Quinasa 2/genética , Proteína 1 Similar a ELAV/metabolismo , Proteína 1 Similar a ELAV/genética , Línea Celular Tumoral , Biosíntesis de Proteínas
2.
Comput Intell Neurosci ; 2022: 6315674, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35845867

RESUMEN

Interactive genetic algorithm (IGA) is an effective way to help users with product design optimization. However, in this process, users need to evaluate the fitness of all individuals in each generation. It will cause users' fatigue when users cannot find satisfactory products after multi-generation evaluations. To solve this problem, an improved interactive genetic algorithm (IGA-KDTGIM) is proposed, which combines K-dimensional tree surrogate model and a graphic interaction mechanism. In this algorithm, the K-dimensional tree surrogate model is built on the basis of users' historical evaluation information to assist the user's evaluation, so as to reduce the times of users' evaluation. At the same time, users are allowed to interact with the graphic interface to adjust the shape of the individual, so as to increase users' creation fun and to make the evolution direction of the population conform to users' expectations. The IGA-KDTGIM is applied to the 3D vase design system and independently experimented with IGA, IGA-KDT, and IGA-GIM, respectively. The average fitness, maximum average fitness, and evaluation times of statistical data were compared and analyzed. Compared with traditional IGA, the number of evaluations required by users decreased by 60.0%, and the average fitness of the population increased by 15.0%. The results show that this method can reduce the users' operation fatigue and improve the ability of finding satisfactory solutions to a certain extent.


Asunto(s)
Algoritmos , Fatiga , Humanos , Inmunoglobulina A
3.
Comput Intell Neurosci ; 2018: 1365747, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30510568

RESUMEN

Compressed sensing (CS) is an important research area of signal sampling and compression, and the essence of signal recovery in CS is an optimization problem of solving the underdetermined system of equations. Greedy pursuit algorithms are widely used to solve this problem. They have low computational complexity; however, their recovery performance is limited. In this paper, an intelligence recovery algorithm is proposed by combining the Bat Algorithm (BA) and the pruning technique in subspace pursuit. Experimental results illustrate that the proposed algorithm has better recovery performance than greedy pursuit algorithms. Moreover, applied to the microseismic monitoring system, the BA can recover the signal well.


Asunto(s)
Algoritmos , Compresión de Datos , Procesamiento de Señales Asistido por Computador , Teorema de Bayes , Humanos
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