Hierarchical integration of DNA nanostructures and NanoGold onto a microchip facilitates covalent chemistry-mediated purification of circulating tumor cells in head and neck squamous cell carcinoma.

It is well-established that the combined use of nanostructured substrates and immunoaffinity agents can enhance the cell-capture performance of the substrates, thus offering a practical solution to effectively capture circulating tumor cells (CTCs) in peripheral blood. Developing along this strategy, this study first demonstrated a top-down approach for the fabrication of tetrahedral DNA nanostructure (TDN)-NanoGold substrates through the hierarchical integration of three functional constituents at various length-scales: a macroscale glass slide, sub-microscale self-organized NanoGold, and nanoscale self-assembled TDN. The TDN-NanoGold substrates were then assembled with microfluidic chaotic mixers to give TDN-NanoGold Click Chips. In conjunction with the use of copper (Cu)-catalyzed azide-alkyne cycloaddition (CuAAC)-mediated CTC capture and restriction enzyme-triggered CTC release, TDN-NanoGold Click Chips allow for effective enumeration and purification of CTCs with intact cell morphologies and preserved molecular integrity. To evaluate the clinical utility of TDN-NanoGold Click Chips, we used these devices to isolate and purify CTCs from patients with human papillomavirus (HPV)-positive (+) head and neck squamous cell carcinoma (HNSCC). The purified HPV(+) HNSCC CTCs were then subjected to RT-ddPCR testing, allowing for detection of E6/E7 oncogenes, the characteristic molecular signatures of HPV(+) HNSCC. We found that the resulting HPV(+) HNSCC CTC counts and E6/E7 transcript copy numbers are correlated with the treatment responses in the patients, suggesting the potential clinical utility of TDN-NanoGold Click Chips for non-invasive diagnostic applications of HPV(+) HNSCC.

Implementation of Fault-Tolerant Encoding Circuit Based on Stabilizer Implementation and "Flag" Bits in Steane Code.

Quantum error correction (QEC) is an effective way to overcome quantum noise and de-coherence, meanwhile the fault tolerance of the encoding circuit, syndrome measurement circuit, and logical gate realization circuit must be ensured so as to achieve reliable quantum computing. Steane code is one of the most famous codes, proposed in 1996, however, the classical encoding circuit based on stabilizer implementation is not fault-tolerant. In this paper, we propose a method to design a fault-tolerant encoding circuit for Calderbank-Shor-Steane (CSS) code based on stabilizer implementation and "flag" bits. We use the Steane code as an example to depict in detail the fault-tolerant encoding circuit design process including the logical operation implementation, the stabilizer implementation, and the "flag" qubits design. The simulation results show that assuming only one quantum gate will be wrong with a certain probability p, the classical encoding circuit will have logic errors proportional to p; our proposed circuit is fault-tolerant as with the help of the "flag" bits, all types of errors in the encoding process can be accurately and uniquely determined, the errors can be fixed. If all the gates will be wrong with a certain probability p, which is the actual situation, the proposed encoding circuit will also be wrong with a certain probability, but its error rate has been reduced greatly from p to p2 compared with the original circuit. This encoding circuit design process can be extended to other CSS codes to improve the correctness of the encoding circuit.