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1.
J Adv Res ; 2024 Aug 09.
Artículo en Inglés | MEDLINE | ID: mdl-39128702

RESUMEN

INTRODUCTION: Cetuximab (CTX) is an effective targeted drug for the treatment of metastatic colorectal cancer, but it is effective only in patients with wild-type KRAS genes. Even in this subset of patients, the sensitivity of CTX in patients with right hemi-colon cancer is much lower than that in patients with left hemi-colon cancer. This significantly limits its clinical application. Therefore, further elucidation of the underlying molecular mechanisms is needed. N-myc downstream-regulated gene 1 (NDRG1) plays an important role in solid tumor invasion and metastasis, but whether it can influence CTX sensitivity has not been thoroughly investigated. OBJECTIVE: Our study aimed to identify a novel mechanism by which NDRG1 affects CTX sensitivity. METHODS: Through mass spectrometry analysis of our previously constructed CTX-resistant RKO and HCT116 cells, we found that the signal transducer and activator of transcription-1 (Stat1) might be a potential target of NDRG1. By knocking out NDRG1 or/and Stat1 genes, we then applied the loss-of-function experiments to explore the regulatory relationship between NDRG1 and Stat1 and their roles in the cell cycle, epithelial-mesenchymal transition (EMT), and the sensitivity to CTX in these two colorectal cancer (CRC) cells. Finally, we used the nude-mouse transplanted tumor model and human CRC samples to verify the expression of NDRG1 and Stat1 and their impact on CTX sensitivity in vivo. RESULTS: Stat1 was upregulated in CTX-resistant cells, whereas NDRG1 was downregulated. Mechanically, NDRG1 was inversely correlated with Stat1 expression. It suppressed CRC cell proliferation, migration, and invasion, and promoted apoptosis and epithelial-mesenchymal transition (EMT) by inhibiting Stat1. In addition, NDRG1 directly interacted with Stat1 and promoted Smurf1-induced Stat1 ubiquitination. Importantly, this novel NDRG1-dependent regulatory loop also enhanced CTX sensitivity both in vitro and in vivo. CONCLUSION: Our study revealed that NDRG1 enhanced the sensitivity to Cetuximab by inhibiting Stat1 expression and promoting its ubiquitination in colorectal cancer, elucidating NDRG1 might be a potential therapeutic target for refractory CTX-resistant CRC tumors. But its clinical value still needs to be validated in a larger sample size as well as a different genetic background.

2.
Sci Rep ; 14(1): 20083, 2024 08 29.
Artículo en Inglés | MEDLINE | ID: mdl-39209895

RESUMEN

Colorectal cancer (CRC) is one of most common tumors worldwide, causing a prominent global health burden. Cell senescence is a complex physiological state, characterized by proliferation arrest. Here, we investigated the role of cellular senescence in the heterogeneity of CRC. Based on senescence-associated genes, CRC samples were classified into different senescence patterns with different survival, cancer-related biological processes and immune cell infiltrations. A senescence-related model was then developed to calculate the senescence-related score to comprehensively explore the heterogeneity of each CRC sample such as stromal activities, immunoreactivities and drug sensitivity. Single-cell analysis revealed there were different immune cell infiltrations between low and high senescence-related model genes enrichment groups, which was confirmed by multiplex immunofluorescence staining. Pseudotime analysis indicated model genes play a pivotal role in the evolution of B cells. Besides, intercellular communication modeled by NicheNet showed tumor cells with higher enrichment of senescence-related model genes highly expressed CXCL2/3 and CCL3/4, which attracted immunosuppressive cell infiltration and promoted tumor metastasis. Finally, top 6 hub genes were identified from senescence-related model genes by PPI analysis. And RT-qPCR revealed the expression differences of hub genes between normal and CRC cell lines, indicating to some extent the clinical practicability of senescence-related model. To sum up, our study explores the impact of cellular senescence on the prognosis, TME and treatment of CRC based on senescence patterns. This provides a new perspective for CRC treatment.


Asunto(s)
Biomarcadores de Tumor , Senescencia Celular , Neoplasias Colorrectales , Análisis de la Célula Individual , Neoplasias Colorrectales/genética , Neoplasias Colorrectales/patología , Neoplasias Colorrectales/metabolismo , Humanos , Senescencia Celular/genética , Análisis de la Célula Individual/métodos , Biomarcadores de Tumor/genética , Biomarcadores de Tumor/metabolismo , Regulación Neoplásica de la Expresión Génica , Análisis de Secuencia de ARN , Línea Celular Tumoral , Heterogeneidad Genética , Perfilación de la Expresión Génica , Microambiente Tumoral/genética
3.
Sci Rep ; 14(1): 12619, 2024 06 01.
Artículo en Inglés | MEDLINE | ID: mdl-38824173

RESUMEN

Subgroup analysis aims to identify subgroups (usually defined by baseline/demographic characteristics), who would (or not) benefit from an intervention under specific conditions. Often performed post hoc (not pre-specified in the protocol), subgroup analyses are prone to elevated type I error due to multiple testing, inadequate power, and inappropriate statistical interpretation. Aside from the well-known Bonferroni correction, subgroup treatment interaction tests can provide useful information to support the hypothesis. Using data from a previously published randomized trial where a p value of 0.015 was found for the comparison between standard and Hemopatch® groups in (the subgroup of) 135 patients who had hand-sewn pancreatic stump closure we first sought to determine whether there was interaction between the number and proportion of the dependent event of interest (POPF) among the subgroup population (patients with hand-sewn stump closure and use of Hemopatch®), Next, we calculated the relative excess risk due to interaction (RERI) and the "attributable proportion" (AP). The p value of the interaction was p = 0.034, the RERI was - 0.77 (p = 0.0204) (the probability of POPF was 0.77 because of the interaction), the RERI was 13% (patients are 13% less likely to sustain POPF because of the interaction), and the AP was - 0.616 (61.6% of patients who did not develop POPF did so because of the interaction). Although no causality can be implied, Hemopatch® may potentially decrease the POPF after distal pancreatectomy when the stump is closed hand-sewn. The hypothesis generated by our subgroup analysis requires confirmation by a specific, randomized trial, including only patients undergoing hand-sewn closure of the pancreatic stump after distal pancreatectomy.Trial registration: INS-621000-0760.


Asunto(s)
Ensayos Clínicos Controlados Aleatorios como Asunto , Humanos , Pancreatectomía , Femenino , Masculino , Páncreas/cirugía
4.
J Hazard Mater ; 476: 135036, 2024 Sep 05.
Artículo en Inglés | MEDLINE | ID: mdl-38936188

RESUMEN

Advanced oxidation technologies based on peroxymonosulfate (PMS) have been extensively applied for the degradation of antibiotics. However, the degradation process inevitably introduces SO42- and other sulfur-containing anions, these pollutants pose a huge threat to the water and soil environment. Addressing these concerns, this study introduced PMS oxidation into a multi-chamber membrane capacitive deionization (MC-MCDI) device to achieve simultaneous tetracycline (TC) degradation and removal of PMS reaction byproduct ions. The experimental results demonstrated that when the TC solution (40 mg L-1) was pre-adsorbed for 10 min, the voltage was 1.2 V and the concentration of PMS solution added was 4 mg mL-1, the removal efficiency of TC and ion can reach 77.4 % and 46.5 % respectively. Furthermore, the activation process of PMS in MC-MCDI/PMS system and the reactive oxygen (ROS) that mainly produce degradation were deeply investigated. Finally, liquid chromatography-mass spectrometry (LC-MS) was employed to identify intermediates of TC degradation, propose potential degradation pathways, and analyze the toxicities of the intermediates. In addition, in five cycles, the MC-MCDI/PMS system demonstrated excellent stability. This study provides an effective strategy for treating TC wastewater and a novel approach for simultaneous TC degradation and desalination.


Asunto(s)
Oxidación-Reducción , Peróxidos , Tetraciclina , Contaminantes Químicos del Agua , Purificación del Agua , Tetraciclina/química , Contaminantes Químicos del Agua/química , Purificación del Agua/métodos , Peróxidos/química , Antibacterianos/química , Membranas Artificiales , Especies Reactivas de Oxígeno/química
5.
Int J Biol Sci ; 20(7): 2388-2402, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38725844

RESUMEN

Metastasis is the leading cause of death in colorectal cancer (CRC) patients. By mediating intercellular communication, exosomes exhibit considerable value in regulating tumor metastasis. Long non-coding RNAs (lncRNAs) are abundant in exosomes and participate in regulating tumor progression. However, it is poorly understood how the cancer-secreted exosomal lncRNAs affect CRC proliferation and metastasis. Here, by analyzing the public databases we identified a lncRNA SNHG3 and demonstrated that SNHG3 was delivered through CRC cells-derived exosomes to promote metastasis in CRC. Mechanistically, exosomal SNHG3 was internalized by CRC cells and afterward upregulated the expression of ß-catenin by facilitating the intranuclear transport of hnRNPC. Consequently, the RNA stability of ß-catenin was enhanced which led to the activation of EMT and metastasis of CRC cells. Our findings expand the oncogenic mechanisms of exosomal SNHG3 and identify it as a diagnostic marker for CRC.


Asunto(s)
Neoplasias Colorrectales , Exosomas , ARN Largo no Codificante , beta Catenina , Humanos , Neoplasias Colorrectales/metabolismo , Neoplasias Colorrectales/patología , Neoplasias Colorrectales/genética , ARN Largo no Codificante/metabolismo , ARN Largo no Codificante/genética , beta Catenina/metabolismo , Exosomas/metabolismo , Línea Celular Tumoral , Estabilidad del ARN/genética , Regulación Neoplásica de la Expresión Génica , Metástasis de la Neoplasia , Animales , Ratones , Proliferación Celular/genética , Ratones Desnudos
6.
Org Lett ; 26(20): 4257-4261, 2024 May 24.
Artículo en Inglés | MEDLINE | ID: mdl-38738813

RESUMEN

Herein, we present a decarboxylative nucleophilic fluorination of carboxylic acids with a silver catalyst. This strategy enables the synthesis of a myriad of diverse and valuable fluorinated motifs under mild conditions, demonstrating good functional-group tolerance and utility in late-stage functionalization. In contrast to traditional electrophilic fluorination, this nucleophilic method utilizes a more readily available nucleophilic fluorinating reagent, providing substantial advantages in terms of cost efficiency, broad substrate scope, and functional-group compatibility.

7.
Sci Rep ; 14(1): 7679, 2024 04 01.
Artículo en Inglés | MEDLINE | ID: mdl-38561368

RESUMEN

Allelopathy is a process whereby a plant directly or indirectly promotes or inhibits growth of surrounding plants. Perennial sugarcane root extracts from various years significantly inhibited Bidens pilosa, Digitaria sanguinalis, sugarcane stem seedlings, and sugarcane tissue-cultured seedlings (P < 0.05), with maximum respective allelopathies of - 0.60, - 0.62, - 0.20, and - 0.29. Allelopathy increased with increasing concentrations for the same-year root extract, and inhibitory effects of the neutral, acidic, and alkaline components of perennial sugarcane root extract from different years were significantly stronger than those of the control for sugarcane stem seedlings (P < 0.05). The results suggest that allelopathic effects of perennial sugarcane root extract vary yearly, acids, esters and phenols could be a main reason for the allelopathic autotoxicity of sugarcane ratoons and depend on the type and content of allelochemicals present, and that allelopathy is influenced by other environmental factors within the rhizosphere such as the presence of old perennial sugarcane roots. This may be a crucial factor contributing to the decline of perennial sugarcane root health.


Asunto(s)
Saccharum , Plantones , Raíces de Plantas/química , Malezas/fisiología , Alelopatía , Extractos Vegetales/química
8.
Genomics ; 116(2): 110821, 2024 03.
Artículo en Inglés | MEDLINE | ID: mdl-38447684

RESUMEN

Prefoldin Subunit 5 (PFDN5) plays a critical role as a member of the prefoldins (PFDNs) in maintaining a finely tuned equilibrium between protein production and degradation. However, there has been no comprehensive analysis specifically focused on PFDN5 thus far. Here, a comprehensive multi-omics (transcriptomics, genomics, and proteomics) analysis, systematic molecular biology experiments (in vitro and in vivo), transcriptome sequencing and PCR Array were performed for identifying the value of PFDN5 in pan-cancer, especially in Gastric Cancer (GC). We found PFDN5 had the potential to serve as a prognostic and therapeutic biomarker in GC. And PFDN5 could promote the proliferation of GC cells, primarily by affecting the cell cycle, cell death and immune process etc. These findings provide novel insights into the molecular mechanisms and precise treatments of in GC.


Asunto(s)
Neoplasias Gástricas , Humanos , Neoplasias Gástricas/genética , Neoplasias Gástricas/metabolismo , Pronóstico , Multiómica , Genómica , Biomarcadores
9.
Water Res ; 251: 121097, 2024 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-38218071

RESUMEN

Permeable reactive barrier (PRB) is an important groundwater treatment technology. However, selecting the optimal reactive material and estimating the width remain critical and challenging problems in PRB design. Machine learning (ML) has advantages in predicting evolution and tracing contaminants in temporal and spatial distribution. In this study, ML was developed to design PRB, and its feasibility was validated through experiments and a case study. ML algorithm showed a good prediction about the Freundlich equilibrium parameter (R2 0.94 for KF, R2 0.96 for n). After SHapley Additive exPlanation (SHAP) analysis, redefining the range of the significant impact factors (initial concentration and pH) can further improve the prediction accuracy (R2 0.99 for KF, R2 0.99 for n). To mitigate model bias and ensure comprehensiveness, evaluation index with expert opinions was used to determine the optimal material from candidate materials. Meanwhile, the ML algorithm was also applied to predict the width of the mass transport zone in the adsorption column. This procedure showed excellent accuracy with R2 and root-mean-square-error (RMSE) of 0.98 and 1.2, respectively. Compared with the traditional width design methodology, ML can enhance design efficiency and save experiment time. The novel approach is based on traditional design principles, and the limitations and challenges are highlighted. After further expanding the data set and optimizing the algorithm, the accuracy of ML can make up for the existing limitations and obtain wider applications.


Asunto(s)
Restauración y Remediación Ambiental , Agua Subterránea , Contaminantes Químicos del Agua , Contaminantes Químicos del Agua/análisis , Agua Subterránea/análisis , Adsorción
10.
Sci Rep ; 13(1): 18906, 2023 11 02.
Artículo en Inglés | MEDLINE | ID: mdl-37919401

RESUMEN

Multiple linear stapler firings is a risk factor for anastomotic leakage (AL) in laparoscopic low anterior resection (LAR) using double stapling technique (DST) anastomosis. In this study, our objective was to establish the risk factors for ≥ 3 linear stapler firings, and to create and validate a predictive model for ≥ 3 linear stapler firings in laparoscopic LAR using DST anastomosis. We retrospectively enrolled 328 mid-low rectal cancer patients undergoing laparoscopic LAR using DST anastomosis. With a split ratio of 4:1, patients were randomly divided into 2 sets: the training set (n = 260) and the testing set (n = 68). A clinical predictive model of ≥ 3 linear stapler firings was constructed by binary logistic regression. Based on three-dimensional convolutional networks, we built an image model using only magnetic resonance (MR) images segmented by Mask region-based convolutional neural network, and an integrated model based on both MR images and clinical variables. Area under the curve (AUC), sensitivity, specificity, accuracy, positive predictive value (PPV), and Youden index were calculated for each model. And the three models were validated by an independent cohort of 128 patients. There were 17.7% (58/328) patients received ≥ 3 linear stapler firings. Tumor size ≥ 5 cm (odds ratio (OR) = 2.54, 95% confidence interval (CI) = 1.15-5.60, p = 0.021) and preoperative carcinoma embryonic antigen (CEA) level > 5 ng/mL [OR = 2.20, 95% CI = 1.20-4.04, p = 0.011] were independent risk factors associated with ≥ 3 linear stapler firings. The integrated model (AUC = 0.88, accuracy = 94.1%) performed better on predicting ≥ 3 linear stapler firings than the clinical model (AUC = 0.72, accuracy = 86.7%) and the image model (AUC = 0.81, accuracy = 91.2%). Similarly, in the validation set, the integrated model (AUC = 0.84, accuracy = 93.8%) performed better than the clinical model (AUC = 0.65, accuracy = 65.6%) and the image model (AUC = 0.75, accuracy = 92.1%). Our deep-learning model based on pelvic MR can help predict the high-risk population with ≥ 3 linear stapler firings in laparoscopic LAR using DST anastomosis. This model might assist in determining preoperatively the anastomotic technique for mid-low rectal cancer patients.


Asunto(s)
Aprendizaje Profundo , Laparoscopía , Neoplasias del Recto , Humanos , Anastomosis Quirúrgica/métodos , Laparoscopía/métodos , Neoplasias del Recto/diagnóstico por imagen , Neoplasias del Recto/cirugía , Neoplasias del Recto/etiología , Estudios Retrospectivos , Grapado Quirúrgico/efectos adversos , Grapado Quirúrgico/métodos
11.
Front Cell Dev Biol ; 11: 1173803, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37691826

RESUMEN

Introduction: Metabolic dysregulation is a widely acknowledged contributor for the development and tumorigenesis of colorectal cancer (CRC), highlighting the need for reliable prognostic biomarkers in this malignancy. Methods: Herein, we identified key genes relevant to CRC metabolism through a comprehensive analysis of lactate metabolism-related genes from GSEA MsigDB, employing univariate Cox regression analysis and random forest algorithms. Clinical prognostic analysis was performed following identification of three key genes, and consistent clustering enabled the classification of public datasets into three patterns with significant prognostic differences. The molecular pathways and tumor microenvironment (TME) of these patterns were then investigated through correlation analyses. Quantitative PCR was employed to quantify the mRNA expression levels of the three pivotal genes in CRC tissue. Single-cell RNA sequencing data and fluorescent multiplex immunohistochemistry were utilized to analyze relevant T cells and validate the correlation between key genes and CD4+ T cells. Results: Our analysis revealed that MPC1, COQ2, and ADAMTS13 significantly stratify the cohort into three patterns with distinct prognoses. Additionally, the immune infiltration and molecular pathways were significantly different for each pattern. Among the key genes, MPC1 and COQ2 were positively associated with good prognosis, whereas ADAMTS13 was negatively associated with good prognosis. Single-cell RNA sequencing (scRNA-seq) data illustrated that the relationship between three key genes and T cells, which was further confirmed by the results of fluorescent multiplex immunohistochemistry demonstrating a positive correlation between MPC1 and COQ2 with CD4+ T cells and a negative correlation between ADAMTS13 and CD4+ T cells. Discussion: These findings suggest that the three key lactate metabolism genes, MPC1, COQ2, and ADAMTS13, may serve as effective prognostic biomarkers and support the link between lactate metabolism and the immune microenvironment in CRC.

12.
Environ Res ; 236(Pt 1): 116798, 2023 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-37527748

RESUMEN

Stabilizing Cr(III) in tannery sludge (TS) via harmless method has always been the goal of environmental pollution treatment. In this study, a simple method to stabilize Cr(III) in TS is proposed via adding kaolin, based on the fact a large amount of organic matter contained in TS. Comprehensive characterizations confirm that kaolin can stabilize Cr(Ⅲ) via its abundant -OH and lamellar structure. Moreover, there are hydrogen bond interactions and ligand exchange-surface complexation between organic matter and kaolin, which is more conducive to form a stable ternary complex with Cr(III), in a state of organic matter-Cr(III)-kaolin. Simultaneously, the BCR sequential extraction experiment shows that the unstable water and acid soluble state of Cr(III) are reduced (from 0.61% to 0.35%), which further indicates that the stabilization of Cr(III) is successful.

14.
Sci Rep ; 13(1): 12150, 2023 07 27.
Artículo en Inglés | MEDLINE | ID: mdl-37500743

RESUMEN

The gut microbiota is closely related to parenteral noncommunicable diseases through intestinal immunity and plays an important role in the occurrence of diabetes and diabetic nephropathy. The aim of the study was to understand the gut-kidney axis by an analysis of gut microbiota composition among patients with biopsy-proven diabetic nephropathy (DN), patients with type 2 diabetes for more than 10 years without kidney damage (DM), and healthy controls (NC). Thirty-five DN patients, 40 DM patients and 40 healthy subjects matched by age and sex were enrolled between January 2022 and December 2022. Baseline information and clinical parameters were collected. 16S rDNA sequencing was performed to characterize the gut microbiome and identify gut microbes that were differentially abundant between patients and healthy controls. The relationship between the relative abundance of specific bacterial taxa in the gut and clinical phenotype and pathological indicators was evaluated. Substantial differences were found in the richness of the gut microbiota and the variation in the bacterial population among DN patients, DM patients and healthy controls. DM patients could be accurately distinguished from age- and sex-matched healthy controls by variations in g_Clostridium-XVIII (AUC = 0.929), and DN patients could be accurately distinguished from age- and sex-matched healthy controls by variations in g_Gemmiger (AUC = 0.842). DN patients could be accurately distinguished from age- and sex-matched DM patients by variations in g_Flavonifractor or g_Eisenbergiella (AUC = 0.909 and 0.886, respectively). The gut microbiota was also closely related to clinical phenotypes and pathological indicators. The study of gut microbiota composition was explored to determine its relationship to the occurrence of DN and a long history of diabetes without kidney damage. The renal pathological progression of DN may be delayed by regulating changes in the gut microbiota.


Asunto(s)
Diabetes Mellitus Tipo 2 , Nefropatías Diabéticas , Microbioma Gastrointestinal , Humanos , Nefropatías Diabéticas/patología , Microbioma Gastrointestinal/fisiología , Diabetes Mellitus Tipo 2/patología , Riñón/patología , Bacterias/genética , Biopsia
15.
Ann Surg Oncol ; 30(9): 5534-5542, 2023 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-37332025

RESUMEN

BACKGROUND: Many studies have used pathologic complete response (pCR) after neoadjuvant chemotherapy (NAC) as the primary endpoint for the short-term efficacy in gastric cancer, but whether it is a good indicator for overall survival is poorly understood. METHODS: This study reviewed a multi-institution database of patients who underwent radical gastrectomy and achieved pCR after NAC. Cox regression models were used to identify clinicopathologic predictors of overall survival (OS) and disease-free survival (DFS). Survival curves were calculated by using the Kaplan-Meier method and compared by means of the log-rank test. RESULTS: OS and DFS in patients with pCR were significantly higher than in those with non-pCR (both P < 0.001). Multivariable analysis confirmed pCR was an independent prognostic factor for OS and DFS (P = 0.009 and P = 0.002 for OS and DFS, respectively). However, the survival benefit for pCR was present only for ypN0 tumors (P = 0.004 and P = 0.001 for OS and DFS, respectively), and OS (P = 0.292) and DFS (P = 0.285) among patients with ypN+ gastric cancer could not be stratified by pCR. CONCLUSIONS: In our study, pCR is an independent prognostic factor for OS and DFS, but the survival benefit for pCR is present only for ypN0 tumors but not ypN+ tumors.


Asunto(s)
Terapia Neoadyuvante , Neoplasias Gástricas , Humanos , Estudios Retrospectivos , Supervivencia sin Enfermedad , Modelos de Riesgos Proporcionales , Neoplasias Gástricas/tratamiento farmacológico , Pronóstico
16.
Cancer Cell Int ; 23(1): 95, 2023 May 18.
Artículo en Inglés | MEDLINE | ID: mdl-37198617

RESUMEN

BACKGROUND: Emerging studies have shown that pyroptosis plays a non-negligible role in the development and treatment of tumors. However, the mechanism of pyroptosis in colorectal cancer (CRC) remains still unclear. Therefore, this study investigated the role of pyroptosis in CRC. METHODS: A pyroptosis-related risk model was developed using univariate Cox regression and LASSO Cox regression analyses. Based on this model, pyroptosis-related risk scores (PRS) of CRC samples with OS time > 0 from Gene Expression Omnibus (GEO) database and The Cancer Genome Atlas (TCGA) database were calculated. The abundance of immune cells in CRC tumor microenvironment (TME) was predicted by single-sample gene-set enrichment analysis (ssGSEA). Then, the responses to chemotherapy and immunotherapy were predicted by pRRophetic algorithm, the tumor immune dysfunction and exclusion (TIDE) and SubMap algorithms, respectively. Moreover, the Cancer Therapeutics Response Portal (CTRP) and PRISM Repurposing dataset (PRISM) were used to explore novel drug treatment strategies of CRC. Finally, we investigated pyroptosis-related genes in the level of single-cell and validated the expression levels of these genes between normal and CRC cell lines by RT-qPCR. RESULTS: Survival analysis showed that CRC samples with low PRS had better overall survival (OS) and progression-free survival (PFS). CRC samples with low PRS had higher immune-related gene expression and immune cell infiltration than those with high PRS. Besides, CRC samples with low PRS were more likely to benefit from 5-fluorouracil based chemotherapy and anti-PD-1 immunotherapy. In novel drug prediction, some compounds such as C6-ceramide and noretynodrel, were inferred as potential drugs for CRC with different PRS. Single-cell analysis revealed pyroptosis-related genes were highly expressed in tumor cells. RT-qPCR also demonstrated different expression levels of these genes between normal and CRC cell lines. CONCLUSIONS: Taken together, this study provides a comprehensive investigation of the role of pyroptosis in CRC at the bulk RNA sequencing (RNA-seq) and single-cell RNA sequencing (scRNA-seq) levels, advances our understanding of CRC characteristics, and guides more effective treatment regimens.

17.
J Hazard Mater ; 453: 131349, 2023 Jul 05.
Artículo en Inglés | MEDLINE | ID: mdl-37084511

RESUMEN

The zero-valent iron (ZVI) based reactive materials are potential remediation reagents in permeable reactive barriers (PRB). Considering that reactive materials is the essential to determining the long-term stability of PRB and the emergence of a large number of new iron-based materials. Here, we present a new approach using machine learning to screen PRB reactive materials, which proposes to improve the efficiency and practicality of selection of ZVI-based materials. To compensate for the insufficient amount of existing machine learning source data and the real-world implementation, machine learning combines evaluation index (EI) and reactive material experimental evaluations. XGboost model is applied to estimate the kinetic data and SHAP is used to improve the accuracy of model. Batch and column tests were conducted to investigate the geochemical characteristics of groundwater. The study find that specific surface area is a fundamental factor correlated with the kinetic constants of ZVI-based materials, according to SHAP analysis. Reclassifying the data with specific surface area significantly improved prediction accuracy (reducing RMSE from 1.84 to 0.6). Experimental evaluation results showed that ZVI had 3.2 times higher anaerobic corrosion reaction kinetic constants and 3.8 times lower selectivity than AC-ZVI. Mechanistic studies revealed the transformation pathways and endpoint products of iron compounds. Overall, this study is a successful initial attempt to use machine learning for selecting reactive materials.

18.
Chemosphere ; 329: 138526, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-37019404

RESUMEN

Bisphenol A (BPA) as a trace contaminant has been reported, due to widespread use in the plastics industry. This study applied the 35 kHz ultrasound (US) to activate four different common oxidants (H2O2, HSO5-, S2O82-, and IO4-) for BPA degradation. With increasing initial concentration of oxidants, the degradation rate of BPA increased. The synergy index confirmed that a synergistic relationship between US and oxidants. This study also examined the impact of pH and temperature. The results showed that the kinetic constants of US, US-H2O2, US-HSO5- and US-IO4-decreased when the pH increased from 6 to 11. The optimal pH for US-S2O82- was 8. Notably, increasing temperature decreased the performance of US, US-H2O2, and US-IO4- systems, while it could increase the degradation of BPA in US-S2O82- and US-HSO5-. The activation energy for BPA decomposition using the US-IO4- system was the lowest, at 0.453nullkJnullmol-1, and the synergy index was the highest at 2.22. Additionally, the ΔG# value was found to be 2.11 + 0.29T when the temperature ranged from 25 °C to 45 °C. The main oxidation contribution is achieved by hydroxyl radicals in scavenger test. The mechanism of activation of US-oxidant is heat and electron transfer. In the case of the US-IO4- system, the economic analysis yielded 271 kwh m-3, which was approximately 2.4 times lower than that of the US process.


Asunto(s)
Oxidantes , Contaminantes Químicos del Agua , Oxidantes/química , Peróxido de Hidrógeno/química , Ultrasonido , Fenoles/química , Compuestos de Bencidrilo/química , Oxidación-Reducción , Contaminantes Químicos del Agua/análisis
19.
BMJ Open ; 13(2): e066981, 2023 02 21.
Artículo en Inglés | MEDLINE | ID: mdl-36810166

RESUMEN

INTRODUCTION: In the case of right-sided transverse colon cancer (RTCC) and hepatic flexure colon cancer (HFCC), there is a potential connection of lymph drainage between mesentery and greater omentum. However, most previous reports have been limited case series with No. 206 and No. 204 lymph node (LN) dissection for RTCC and HFCC. METHODS AND ANALYSIS: The InCLART Study is a prospective observational study aiming to enrol 427 patients with RTCC and HFCC treated at 21 high-volume institutions in China. The prevalence of infrapyloric (No. 206) and greater curvature (No. 204) LN metastasis and short-term outcomes will be investigated in a consecutive series of patients with T2 or deeper invasion RTCC or HFCC, following the principle of complete mesocolic excision with central vascular ligation. Primary endpoints were performed to identify the prevalence of No. 206 and No. 204 LN metastasis. Secondary analyses will be used to estimate prognostic outcomes, intraoperative and postoperative complications, the consistency of preoperative evaluation and postoperative pathological results of LN metastasis. ETHICS AND DISSEMINATION: Ethical approval for the study has been granted by the Ruijin Hospital Ethics Committee (approval number: 2019-081) and has been or will be approved successively by each participating centre's Research Ethics Board. The findings will be disseminated in peer-reviewed publications. TRIAL REGISTRATION NUMBER: ClinicalTrials.gov Registry (NCT03936530; https://clinicaltrials.gov/ct2/show/NCT03936530).


Asunto(s)
Adenocarcinoma , Colon Transverso , Neoplasias del Colon , Laparoscopía , Humanos , Colon Transverso/patología , Colon Transverso/cirugía , Ganglios Linfáticos/patología , Metástasis Linfática/patología , Escisión del Ganglio Linfático/métodos , Neoplasias del Colon/cirugía , Adenocarcinoma/patología , Colectomía/efectos adversos , Laparoscopía/métodos , Estudios Observacionales como Asunto , Estudios Multicéntricos como Asunto
20.
Materials (Basel) ; 16(2)2023 Jan 16.
Artículo en Inglés | MEDLINE | ID: mdl-36676616

RESUMEN

To investigate the normal section strength and cracking bending moment of normal concrete-ultra-high-performance concrete (NC-UHPC) composite beams, calculation formulas were established considering the tensile strength of UHPC based on the current railway bridge design code. Using the railway T-beam as a template, prestressed NC-UHPC composite beams with different NC layer heights were built. A static bending test was performed, the pressure of the steel strand and the deflection and strain of the beam were measured, and the evolution of cracks in each beam was observed. The calculation formulas of the normal section strength and cracking bending moment of NC-UHPC composite beam were verified by the test. The results showed that the type of strain was similar to load-deflection curves with increasing load; the bending failure process of the NC-UHPC composite beam showed four obvious stages: elasticity, uniform cracking, crack development, and yield. Cracks in the beam started to appear at stage II, developed rapidly at stage III, and stopped emerging at stage IV. The calculation formulas for the normal section strength and the cracking bending moment of the NC-UHPC composite beam were in good agreement with the test values. Normal concrete with a compressive strength of 80 MPa can replace UHPC for the design of NC-UHPC composite beams.

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