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1.
IEEE J Biomed Health Inform ; 28(6): 3545-3556, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38442054

RESUMEN

Accurate and automatic delineation of the left atrium (LA) is crucial for computer-aided diagnosis of atrial fibrillation-related diseases. However, effective model training typically requires a large amount of labeled data, which is time-consuming and labor-intensive. In this study, we propose a novel LA delineation framework. The region of LA is first detected using an actor-critic based deep reinforcement learning method with a shape-adaptive detection strategy using only box-level annotations, bypassing the need for voxel-level labeling. With the effectively detected LA, the impacts of class-imbalance and interference from surrounding tissues are significantly reduced. Subsequently, a semi-supervised segmentation scheme is coined to precisely delineate the contour of LA in 3D volume. The scheme integrates two independent networks with distinct structures, enabling implicit consistency regularization, capturing more spatial features, and avoiding the error accumulation present in current mainstream semi-supervised frameworks. Specifically, one network is combined with Transformer to capture latent spatial features, while the other network is based on pure CNN to capture local features. The difference prediction between these two sub-networks is exploited to mutually provide high-quality pseudo-labels and correct the cognitive bias. Experimental results on two public datasets demonstrate that our proposed strategy outperforms several state-of-the-art methods in terms of accuracy and clinical convenience.


Asunto(s)
Fibrilación Atrial , Atrios Cardíacos , Interpretación de Imagen Asistida por Computador , Imagenología Tridimensional , Imagen por Resonancia Magnética , Humanos , Atrios Cardíacos/diagnóstico por imagen , Imagenología Tridimensional/métodos , Imagen por Resonancia Magnética/métodos , Fibrilación Atrial/diagnóstico por imagen , Interpretación de Imagen Asistida por Computador/métodos , Algoritmos , Aprendizaje Profundo , Aprendizaje Automático Supervisado
2.
IEEE J Biomed Health Inform ; 28(5): 2854-2865, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38427554

RESUMEN

Automated segmentation of liver tumors in CT scans is pivotal for diagnosing and treating liver cancer, offering a valuable alternative to labor-intensive manual processes and ensuring the provision of accurate and reliable clinical assessment. However, the inherent variability of liver tumors, coupled with the challenges posed by blurred boundaries in imaging characteristics, presents a substantial obstacle to achieving their precise segmentation. In this paper, we propose a novel dual-branch liver tumor segmentation model, SBCNet, to address these challenges effectively. Specifically, our proposed method introduces a contextual encoding module, which enables a better identification of tumor variability using an advanced multi-scale adaptive kernel. Moreover, a boundary enhancement module is designed for the counterpart branch to enhance the perception of boundaries by incorporating contour learning with the Sobel operator. Finally, we propose a hybrid multi-task loss function, concurrently concerning tumors' scale and boundary features, to foster interaction across different tasks of dual branches, further improving tumor segmentation. Experimental validation on the publicly available LiTS dataset demonstrates the practical efficacy of each module, with SBCNet yielding competitive results compared to other state-of-the-art methods for liver tumor segmentation.


Asunto(s)
Algoritmos , Neoplasias Hepáticas , Tomografía Computarizada por Rayos X , Humanos , Neoplasias Hepáticas/diagnóstico por imagen , Tomografía Computarizada por Rayos X/métodos , Hígado/diagnóstico por imagen , Interpretación de Imagen Radiográfica Asistida por Computador/métodos , Redes Neurales de la Computación , Aprendizaje Profundo
3.
IEEE Trans Med Imaging ; 43(4): 1347-1364, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-37995173

RESUMEN

Image segmentation achieves significant improvements with deep neural networks at the premise of a large scale of labeled training data, which is laborious to assure in medical image tasks. Recently, semi-supervised learning (SSL) has shown great potential in medical image segmentation. However, the influence of the learning target quality for unlabeled data is usually neglected in these SSL methods. Therefore, this study proposes a novel self-correcting co-training scheme to learn a better target that is more similar to ground-truth labels from collaborative network outputs. Our work has three-fold highlights. First, we advance the learning target generation as a learning task, improving the learning confidence for unannotated data with a self-correcting module. Second, we impose a structure constraint to encourage the shape similarity further between the improved learning target and the collaborative network outputs. Finally, we propose an innovative pixel-wise contrastive learning loss to boost the representation capacity under the guidance of an improved learning target, thus exploring unlabeled data more efficiently with the awareness of semantic context. We have extensively evaluated our method with the state-of-the-art semi-supervised approaches on four public-available datasets, including the ACDC dataset, M&Ms dataset, Pancreas-CT dataset, and Task_07 CT dataset. The experimental results with different labeled-data ratios show our proposed method's superiority over other existing methods, demonstrating its effectiveness in semi-supervised medical image segmentation.


Asunto(s)
Redes Neurales de la Computación , Semántica , Aprendizaje Automático Supervisado , Tomografía Computarizada por Rayos X , Procesamiento de Imagen Asistido por Computador
4.
Comput Biol Med ; 156: 106493, 2023 04.
Artículo en Inglés | MEDLINE | ID: mdl-36893708

RESUMEN

The coronary arteries supply blood to the myocardium, which originate from the root of the aorta and mainly branch into the left and right. X-ray digital subtraction angiography (DSA) is a technique for evaluating coronary artery plaques and narrowing, that is widely used because of its time efficiency and cost-effectiveness. However, automated coronary vessel classification and segmentation remains challenging using a little data. Therefore, the purpose of this study is twofold: one is to propose a more robust method for vessel segmentation, the other is to provide a solution that is feasible with a small amount of labeled data. Currently, there are three main types of vessel segmentation methods, i.e., graphical- and statistical-based; clustering theory based, and deep learning-based methods for pixel-by-pixel probabilistic prediction, among which the last method is the mainstream with high accuracy and automation. Under this trend, an Inception-SwinUnet (ISUnet) network combining the convolutional neural network and Transformer basic module was proposed in this paper. Considering that data-driven fully supervised learning (FSL) segmentation methods require a large set of paired data with high-quality pixel-level annotation, which is expertise-demanding and time-consuming, we proposed a Semi-supervised Learning (SSL) method to achieve better performance with a small amount of labeled and unlabeled data. Different from the classical SSL method, i.e., Mean-Teacher, our method used two different networks for cross-teaching as the backbone. Meanwhile, inspired by deep supervision and confidence learning (CL), two effective strategies for SSL were adopted, which were denominated Pyramid-consistency Learning (PL) and Confidence Learning (CL), respectively. Both were designed to filter the noise and improve the credibility of pseudo labels generated by unlabeled data. Compared with existing methods, ours achieved superior segmentation performance over other FSL and SSL ones by using data with a small equal number of labels. Code is available in https://github.com/Allenem/SSL4DSA.


Asunto(s)
Vasos Coronarios , Corazón , Angiografía de Substracción Digital , Miocardio , Aorta , Procesamiento de Imagen Asistido por Computador
5.
Healthcare (Basel) ; 11(1)2023 Jan 03.
Artículo en Inglés | MEDLINE | ID: mdl-36611604

RESUMEN

OBJECTIVE: Cervical cancer is an important factor threatening women's health in China. This study examined the epidemiological and economic burden of cervical cancer among the medically insured population, which could provide data support for government departments to formulate policies. METHODS: All new cases of cervical cancer under the Urban Employee Basic Medical Insurance (UEBMI) plan in a provincial capital city in eastern China from 2010 to 2014 were collected. The Cox proportional hazard model was used to analyze the factors affecting the survival rates for cervical cancer. Outpatient and hospitalization expenses were used to assess the direct economic burden, and the Potential Years of Life Loss (PYLL) and potential economic loss were calculated by the direct method to assess indirect burden. RESULTS: During the observation period, there were 1115 new cases and 137 deaths. The incidence rate was 14.85/100,000 person years, the mortality was 1.82/100,000 person years, and the five-year survival rate was 75.3%. The age of onset was mainly concentrated in the 30-59 age group (82.9%) and the tendency was towards younger populations. The age of onset (HR = 1.037, 95% CI = 1.024-1.051), the frequency of hospitalization services (HR = 1.085, 95% CI = 1.061-1.109), and the average length of stay (ALOS) (HR = 1.020, 95% CI = 1.005-1.051) were the related factors affecting overall survival. Among the direct economic burden, the average outpatient cost was $4314, and the average hospitalization cost was $12,007. The average outpatient and hospitalization costs within 12 months after onset were $2871 and $8963, respectively. As for indirect burden, the average Potential Years of Life Loss (PYLL) was 27.95 years, and the average potential economic loss was $95,200. CONCLUSIONS: The epidemiological and economic burden reported in the study was at a high level, and the onset age of cervical patients gradually became younger. The age of onset, the frequency of hospitalization services and the ALOS of cervical cancer patients should be given greater attention. Policymakers and researchers should focus on the trend of younger onset age of cervical cancer and the survival situation within 12 months after onset. Early intervention for cervical cancer patients, particularly younger women, may help reduce the burden of cervical cancer.

6.
Int J Med Robot ; 18(6): e2444, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-35923081

RESUMEN

BACKGROUND: Endovascular intervention is an important minimally invasive surgery that requires professional skills to operate surgical instruments. Such skills are mainly gained through the traditional training paradigm of "see one, do one, teach one", rather than the guidewire simulation system. METHODS: To identify limitations of existing guidewire simulation research and suggest further research orientations, a comprehensive search on literature published from 2007 to 2021 is performed in 11 selected electronic databases. Through our scrutiny and filtration, 34 articles are selected as major studies for careful examinations. RESULTS: We identify challenges faced in the field of endovascular intervention guidewire simulation. We examine and classify guidewire simulation techniques (including guidewire models, collision detection methods and collision response methods), accuracy evaluation methods, error sources, and performance optimization methods. CONCLUSIONS: Guidewire simulation can satisfy the urgent need to train surgeons, thus more efforts should be dedicated enabling its wide application in clinical environment.


Asunto(s)
Procedimientos Endovasculares , Cirujanos , Humanos , Competencia Clínica , Simulación por Computador , Cateterismo , Procedimientos Endovasculares/educación
7.
IEEE J Biomed Health Inform ; 26(6): 2648-2659, 2022 06.
Artículo en Inglés | MEDLINE | ID: mdl-34928809

RESUMEN

Hard sample selection can effectively improve model convergence by extracting the most representative samples from a training set. However, due to the large capacity of medical images, existing sampling strategies suffer from insufficient exploitation for hard samples or high time cost for sample selection when adopted by 3D patch-based models in the field of multi-organ segmentation. In this paper, we present a novel and effective online hard patch mining (OHPM) algorithm. In our method, an average shape model that can be mapped with all training images is constructed to guide the exploration of hard patches and aggregate feedback from predicted patches. The process of hard mining is formalized as a multi-armed bandit problem and solved with bandit algorithms. With the shape model, OHPM requires negligible time consumption and can intuitively locate difficult anatomical areas during training. The employment of bandit algorithms ensures online and sufficient hard mining. We integrate OHPM with advanced segmentation networks and evaluate them on two datasets containing different anatomical structures. Comparative experiments with other sampling strategies demonstrate the superiority of OHPM in boosting segmentation performance and improving model convergence. The results in each dataset with each network suggest that OHPM significantly outperforms other sampling strategies by nearly 2% average Dice score.


Asunto(s)
Algoritmos , Procesamiento de Imagen Asistido por Computador , Humanos , Procesamiento de Imagen Asistido por Computador/métodos
8.
Comput Med Imaging Graph ; 94: 101989, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34741846

RESUMEN

BACKGROUND AND OBJECTIVE: Real time localization and shape extraction of guide wire in fluoroscopic images plays a significant role in the image guided navigation during cerebral and cardiovascular interventions. Given the complexity of the non-rigid and sparse characteristics of guide wire structures, and the low SNR(Signal Noise Ratio) of fluoroscopic images, traditional handcrafted guide wire tracking methods such as Frangi filter, Hessian Matrix, or open active contour usually produce insufficient accuracy with high computational cost, and may require extra human intervention for proper initialization or correction. The application of deep learning techniques to guide wire tracking is reported to produce significant improvement in guide wire localization accuracy, but the heavy calculation cost is still a concern. METHOD: In this paper we propose a two phase deep learning scheme for accurate and real time guide wire shape extraction in fluoroscopic sequences. In the first phase we train a guide wire localization network to pick image regions containing guide wire structures. From the picked image regions, we train a guide wire shape extraction network in the second phase to mark the guide wire pixels. RESULTS: We report that our proposed method can accurately distinguish about 99% of the guide wire structure pixels, and the falsely detected pixels in the background are close to 0, the average offset from the ground truth is less than 1 pixel. For extreme cases where traditional handcrafted method may fail, our proposed method can still extract guide wire completely and accurately. The processing time for a 512 × 512 pixels image is 78 ms. CONCLUSION: Compared with the traditional filtering based method from our previous work, we show that our proposed method can achieve more accurate and stable performance. Compared with other deep learning methods, our proposed method significantly improve calculation efficiency to meet the real time requirement of clinical applications.


Asunto(s)
Aprendizaje Profundo , Fluoroscopía/métodos , Humanos
9.
Med Image Anal ; 73: 102156, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34274689

RESUMEN

Automated multi-organ abdominal Computed Tomography (CT) image segmentation can assist the treatment planning, diagnosis, and improve many clinical workflows' efficiency. The 3-D Convolutional Neural Network (CNN) recently attained state-of-the-art accuracy, which typically relies on supervised training with many manual annotated data. Many methods used the data augmentation strategy with a rigid or affine spatial transformation to alleviate the over-fitting problem and improve the network's robustness. However, the rigid or affine spatial transformation fails to capture the complex voxel-based deformation in the abdomen, filled with many soft organs. We developed a novel Hybrid Deformable Model (HDM), which consists of the inter-and intra-patient deformation for more effective data augmentation to tackle this issue. The inter-patient deformations were extracted from the learning-based deformable registration between different patients, while the intra-patient deformations were formed using the random 3-D Thin-Plate-Spline (TPS) transformation. Incorporating the HDM enabled the network to capture many of the subtle deformations of abdominal organs. To find a better solution and achieve faster convergence for network training, we fused the pre-trained multi-scale features into the a 3-D attention U-Net. We directly compared the segmentation accuracy of the proposed method to the previous techniques on several centers' datasets via cross-validation. The proposed method achieves the average Dice Similarity Coefficient (DSC) 0.852, which outperformed the other state-of-the-art on multi-organ abdominal CT segmentation results.


Asunto(s)
Procesamiento de Imagen Asistido por Computador , Tomografía Computarizada por Rayos X , Abdomen/diagnóstico por imagen , Humanos , Redes Neurales de la Computación
10.
Faraday Discuss ; 231(0): 342-355, 2021 10 15.
Artículo en Inglés | MEDLINE | ID: mdl-34195742

RESUMEN

p-Toluenesulfonic acid (PTSA) is a typical homogeneous acid for biodiesel production. Due to the shortcomings of high deliquescence and non-recyclability, it is necessary to synthesize a recyclable solid acid. For the sake of this, UiO-66(Zr) is used to support PTSA through defect coordination, and four different preparation routes are compared. The obtained catalyst (UiO-G) is characterized with thermogravimetry analysis (TG), X-ray powder diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), pyridine FTIR spectroscopy (py-FTIR), nitrogen adsorption-desorption, and base titration. In addition, the effects of esterification parameters on conversion are investigated to obtain the optimal conditions. To further verify the high catalytic activity of UiO-G, the kinetic model of solid-liquid-liquid esterification is established, in which the kinetic parameters of activation energy, reaction order, and exponential factor are calculated. Results indicate the PTSA is successfully inserted in UiO-66(Zr) without destroying its original structure. With that, the maximum conversion of oleic acid to biodiesel of 91.3% is achieved with a molar ratio of methanol/oleic acid of 12 and a catalyst amount of 8 wt% at 70 °C for 2 h. Moreover, UiO-G could remarkably reduce the activation energy, where the activation energy is 28.61 kJ mol-1, the average reaction order is 1.51, and the pre-exponential factor is 29.11 min-1.


Asunto(s)
Biocombustibles , Bencenosulfonatos , Catálisis , Esterificación , Estructuras Metalorgánicas , Ácidos Ftálicos , Pirenos
11.
Int J Comput Assist Radiol Surg ; 16(6): 1003-1014, 2021 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-33934286

RESUMEN

PURPOSE: Radioactive seed implantation is an effective invasive treatment method for malignant liver tumors in hepatocellular carcinomas. However, challenges of the manual procedure may degrade the efficacy of the technique, such as the high accuracy requirement and radiation exposure to the surgeons. This paper aims to develop a robotic system and its control methods for assisting surgeons on the treatment. METHOD: We present an interventional robotic system, which consists of a 5 Degree-of-Freedom (DoF) positioning robotic arm (a 3-DoF translational joint and a 2-DoF revolute joint) and a needle actuator used for needle insertion and radioactive seeds implantation. Control strategy is designed for the system to ensure the safety of the motion. In the designed framework, an artificial potential field (APF)-based motion planning and an ultrasound (US) image-based contacting methods are proposed for the control. RESULT: Experiments were performed to evaluate position and orientation accuracy as well as validate the motion planning procedure of the system. The mean and standard deviation of targeting error is 0.69 mm and 0.33 mm, respectively. Needle placement accuracy is 1.10 mm by mean. The feasibility of the control strategy, including path planning and the contacting methods, is demonstrated by simulation and experiments based on an abdominal phantom. CONCLUSION: This paper presents a robotic system with force and US image feedback in assisting surgeons performing brachytherapy on liver tumors. The proposed robotic system is capable of executing an accurate needle insertion task with by optical tracking. The proposed methods improve the safety of the robot's motion and automate the process of US probe contacting under the feedback of US-image.


Asunto(s)
Braquiterapia/métodos , Neoplasias Hepáticas/radioterapia , Fantasmas de Imagen , Robótica/instrumentación , Humanos , Neoplasias Hepáticas/diagnóstico
12.
Comput Biol Med ; 134: 104456, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-34010790

RESUMEN

The purpose of this study is to develop a practical stripe artifacts correction framework on three-dimensional (3-D) time-of-flight magnetic resonance angiography (TOF-MRA) obtained by multiple overlapping thin slab acquisitions (MOTSA) technology. In this work, the stripe artifacts in TOF-MRA were considered as a part of image texture. To separate the image structure and the texture, the relative total variation (RTV) was firstly employed to smooth the TOF-MRA for generating the template image with fewer image textures. Then a residual image was generated, which was the difference between the template image and the raw TOF-MRA. The residual image was served as the image texture, which contained the image details and stripe artifacts. Then, we obtained the artifact image from the residual image via a filter in a specific direction since the image artifacts appeared as stripes. The image details were then produced from the difference between the artifact image and the image texture. To produce the corrected images, we finally compensated the image details to the RTV smoothing image. The proposed method was continued until the stripe artifacts during the iteration vary as little as possible. The digital phantom and the real patients' TOF-MRA were used to test the approach. The spatial uniformity was increased from 74% to 82% and the structural similarity was improved from 86% to 98% in the digital phantom test by using the proposed algorithm. Our approach proved to be highly successful in eliminating stripe artifacts in real patient data tests while retaining image details. The proposed iterative framework on TOF-MRA stripe artifact correction is effective and appealing for enhancing the imaging performance of multi-slab 3-D acquisitions.


Asunto(s)
Artefactos , Angiografía por Resonancia Magnética , Algoritmos , Humanos , Fantasmas de Imagen
13.
Cancer Manag Res ; 13: 953-963, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33568941

RESUMEN

BACKGROUND: Renal cell carcinoma (RCC) is a common urological system malignancy lack of effective therapeutic options. Upregulation of the Bcl-2 proteins was correlated with poor prognosis of RCC, suggesting that BH-3 mimetics may be a promising treatment option. ABT-263 is a BH3 mimetic that possesses anti-tumor effects. TW-37 is another inhibitor of Bcl-2 family protein with potential anti-tumor activities. However, since their effect as single agent is limited, combination treatment represents a strategy to improve the efficiency. We studied the ABT-263 in combination with TW-37 and analyzed the molecular mechanisms of action in RCC cells. METHODS: MTT and colony formation assays were used to measure the proliferation of RCC cells. Transwell assay was used to assay the migration and invasion of RCC cells. Cell cycle distribution and apoptosis were measured using the flow cytometry and apoptotic nucleosome assay, respectively. Western blotting was performed to measure the change of proteins. The anti-tumor effects of ABT-263, TW-37 and their combination were also evaluated in vivo. RESULTS: Cotreatment of TW-37 and ABT-263 synergistically repressed the proliferation of RCC cells. TW-37 and ABT-263 also synergistically inhibited the migration and invasion of RCC cells It was also showed that TW-37 and ABT-263 synergistically induced cell cycle arrest at the G2/M phase. Furthermore, increased apoptosis was observed after exposure to TW-37 and ABT-263. Mechanism investigation showed that TW-37 and ABT-263 synergistically induced apoptosis via the mitochondrial pathway and relied on the activation of Bax and caspases. Furthermore, ERK signaling pathway activation was detected after treated with TW-37 and ABT-263. Finally, TW-37 and ABT-263 also synergistically repressed the growth of RCC cells in xenograft mice. CONCLUSION: In summary, our data demonstrated that combined treatment with TW-37 and ABT-263 exhibited synergistic RCC cell death and this combination may be applied as an effective therapeutic strategy against RCC.

14.
Abdom Radiol (NY) ; 46(6): 2690-2698, 2021 06.
Artículo en Inglés | MEDLINE | ID: mdl-33427908

RESUMEN

OBJECTIVE: To evaluate the efficiency of CT-based peritumoral radiomics signatures of clear cell renal cell carcinoma (ccRCC) for malignancy grading in preoperative prediction. MATERIALS AND METHODS: 203 patients with pathologically confirmed as ccRCC were retrospectively enrolled in this study. All patients were categorized into training set (n = 122) and validation set (n = 81). For each patient, two types of volumes of interest (VOI) were masked on CT images. One type of VOIs was defined as the tumor mass volume (TMV), which was masked by radiologists delineating the outline of all contiguous slices of the entire tumor, while the other type defined as the peritumoral tumor volume (PTV), which was automatically created by an image morphological method. 1760 radiomics features were calculated from each VOI, and then the discriminative radiomics features were selected by Pearson correlation analysis for reproducibility and redundancy. These selected features were investigated their validity for building radiomics signatures by mRMR feature ranking method. Finally, the top ranked features, which were used as radiomics signatures, were input into a classifier for malignancy grading. The prediction performance was evaluated by receiver operating characteristic (ROC) curve in an independent validation cohort. RESULTS: The radiomics signatures of PTV showed a better performance on malignancy grade prediction of ccRCC with AUC of 0.807 (95% CI 0.800-0.834) in train data and 0.848 (95% CI 0.760-0.936) in validation data, while the radiomics signatures of TMV with AUC of 0.773 (95% CI 0.744-0.802) in train data and 0.810 (95% CI 0.706-0.914) in validation data. CONCLUSION: The CT-based peritumoral radiomics signature is a potential way to be used as a noninvasive tool to preoperatively predict the malignancy grades of ccRCC.


Asunto(s)
Carcinoma de Células Renales , Neoplasias Renales , Carcinoma de Células Renales/diagnóstico por imagen , Humanos , Neoplasias Renales/diagnóstico por imagen , Reproducibilidad de los Resultados , Estudios Retrospectivos , Tomografía Computarizada por Rayos X
15.
Biomed Res Int ; 2020: 5615371, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32733945

RESUMEN

To align multimodal images is important for information fusion, clinical diagnosis, treatment planning, and delivery, while few methods have been dedicated to matching computerized tomography (CT) and magnetic resonance (MR) images of lumbar spine. This study proposes a coarse-to-fine registration framework to address this issue. Firstly, a pair of CT-MR images are rigidly aligned for global positioning. Then, a bending energy term is penalized into the normalized mutual information for the local deformation of soft tissues. In the end, the framework is validated on 40 pairs of CT-MR images from our in-house collection and 15 image pairs from the SpineWeb database. Experimental results show high overlapping ratio (in-house collection, vertebrae 0.97 ± 0.02, blood vessel 0.88 ± 0.07; SpineWeb, vertebrae 0.95 ± 0.03, blood vessel 0.93 ± 0.10) and low target registration error (in-house collection, ≤2.00 ± 0.62 mm; SpineWeb, ≤2.37 ± 0.76 mm) are achieved. The proposed framework concerns both the incompressibility of bone structures and the nonrigid deformation of soft tissues. It enables accurate CT-MR registration of lumbar spine images and facilitates image fusion, spine disease diagnosis, and interventional treatment delivery.


Asunto(s)
Algoritmos , Imagenología Tridimensional , Vértebras Lumbares/diagnóstico por imagen , Imagen Multimodal , Puntos Anatómicos de Referencia , Humanos , Imagen por Resonancia Magnética , Termodinámica , Factores de Tiempo , Tomografía Computarizada por Rayos X
16.
Int J Med Robot ; 16(6): 1-11, 2020 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-32589814

RESUMEN

In this paper, a new matrix-based method is proposed to real-time determine, the guidewire position inside an arterial system. The guidewire path is obtained by the optimal path method, particularly, the fusiform ternary tree method according to the principle of minimum output value of root node. An adaptive sampling strategy, and an optimization strategy based on the proximal end and distal end of the guidewire are proposed to change the guidewire position for obtaining an ideal guidewire path. Compared to the existing methods, the proposed method can achieve 74%, 64%, and 70% improvements in accuracy for phantoms 1, 2, and 3, respectively, investigated in this work.


Asunto(s)
Cateterismo , Simulación por Computador , Humanos , Fantasmas de Imagen
17.
Ultrasound Med Biol ; 46(8): 2079-2089, 2020 08.
Artículo en Inglés | MEDLINE | ID: mdl-32446677

RESUMEN

Intra-operative ultrasound (US) is a popular imaging modality for its non-radiative and real-time advantages. However, it is still challenging to perform an interventional procedure under two-dimensional (2-D) US image guidance. Accordingly, the trend has been to perform three-dimensional (3-D) US image guidance by equipping the US probe with a spatial position tracking device, which requires accurate probe calibration for determining the spatial position between the B-scan image and the tracked probe. In this report, we propose a novel probe spatial calibration method by developing a calibration phantom combined with the tracking stylus. The calibration phantom is custom-designed to simplify the alignment between the stylus tip and the B-scan image plane. The spatial position of the stylus tip is tracked in real time, and its 2-D image pixel location is extracted and collected simultaneously. Gaussian distribution is used to model the spatial position of the stylus tip and the iterative closest point-based optimization algorithm is used to estimate the spatial transformation that matches these two point sets. Once the probe is calibrated, its trajectory and the B-scan image are collected and used for the volume reconstruction in our freehand 3-D US imaging system. Experimental results demonstrate that the probe calibration approach results in less than 1-mm mean point reconstruction accuracy. It requires less than 5 min for an inexperienced user to complete the probe calibration procedure with minimal training. The mockup test shows that the 3-D images are geometrically correct with 0.28°-angle accuracy and 0.40-mm distance accuracy.


Asunto(s)
Fantasmas de Imagen , Ultrasonografía/métodos , Calibración , Imagenología Tridimensional/métodos , Ultrasonografía/instrumentación , Ultrasonografía/normas
18.
Phys Med Biol ; 65(5): 055010, 2020 03 06.
Artículo en Inglés | MEDLINE | ID: mdl-31935699

RESUMEN

The 3D/2D registration of pre-operative computed tomography angiography (CTA) and intra-operative x-ray angiography (XRA) images in vascular intervention is imperative for guiding surgical instruments and reducing the dosage of toxic contrast agents. In this study, 3D/2D vascular registration is formulated as a search tree problem on the basis of the topological continuity of vessels and the fact that matching can be decomposed into continuous states. In each node of the tree, a closed-solution of 3D/2D transformation is used to obtain the registration results based on the dense correspondences of vessel points, and the results of matching and registration are calculated and recorded. Then, a hand-crafted score that quantifies the qualities of matching and registration of vessels is used, and the remaining problem focuses on finding the highest score in the search tree. An improved heuristic tree search strategy is also proposed to find the best registration. The proposed method is evaluated and compared with four state-of-the-art methods. Experiments on simulated data demonstrate that our method is insensitive to initial pose and robust to noise and deformation. It outperforms other methods in terms of registering real model data and clinical coronary data. In the 3D/2D registration of uninitialized and initialized coronary arteries, the average registration errors are 1.85 and 1.79 mm, respectively. Given that the proposed method is independent of the initial pose, it can be used to navigate vascular intervention for clinical practice.


Asunto(s)
Algoritmos , Angiografía/métodos , Vasos Coronarios/diagnóstico por imagen , Heurística , Imagenología Tridimensional/métodos , Tomografía Computarizada por Rayos X/métodos , Humanos
19.
Comput Methods Programs Biomed ; 186: 105110, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-31751871

RESUMEN

BACKGROUND AND OBJECTIVE: For cerebrovascular segmentation from time-of-flight (TOF) magnetic resonance angiography (MRA), the focused issues are segmentation accuracy, vascular network coverage ratio, and cerebral artery and vein (CA/CV) separation. Therefore, cerebral artery segmentation is a challenging work, while a complete solution is lacking so far. METHODS: The preprocessing of skull-stripping and Hessian-based feature extraction is first implemented to acquire an indirect prior knowledge of vascular distribution and shape. Then, a novel intensity- and shape-based Markov statistical modeling is proposed for complete cerebrovascular segmentation, where our low-level process employs a Gaussian mixture model to fit the intensity histogram of the skull-stripped TOF-MRA data, while our high-level process employs the vascular shape prior to construct the energy function. To regularize the individual data processes, Markov regularization parameter is automatically estimated by using a machine-learning algorithm. Further, cerebral artery and vein (CA/CV) separation is explored with a series of morphological logic operations, which are based on a direct priori knowledge on the relationship of arteriovenous topology and brain tissues in between TOF-MRA and MR-T1. RESULTS: We employed 109 sets of public datasets from MIDAS for qualitative and quantitative assessment. The Dice similarity coefficient, false negative rate (FNR), and false positive rate (FPR) of 0.933, 0.158, and 0.091% on average, as well as CA/CV separation results with the agreement, FNR, and FPR of 0.976, 0.041, and 0.022 on average. For clinical visual assessment, our methods can segment various sizes of the vessel in different contrast region, especially performs better on vessels of small size in low contrast region. CONCLUSION: Our methods obtained satisfying results in visual and quantitative evaluation. The proposed method is capable of accurate cerebrovascular segmentation and efficient CA/CV separation. Further, it can stimulate valuable clinical applications on the computer-assisted cerebrovascular intervention according to the neurosurgeon's recommendation.


Asunto(s)
Arterias Cerebrales/diagnóstico por imagen , Bases del Conocimiento , Angiografía por Resonancia Magnética/métodos , Modelos Estadísticos , Algoritmos , Humanos , Interpretación de Imagen Asistida por Computador/métodos
20.
Am J Transl Res ; 11(6): 3461-3471, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-31312358

RESUMEN

Prostate cancer is the second most common malignancy among men and causes a myriad of health problem for males that are diagnosed with the cancer. Although the 5-year relative survival rate of prostate cancer patients has been significantly increased due to prostate-specific antigen testing and treatment advances, patients that develop metastatic castrate-resistant prostate cancer continue to have poor survival rates. Thus, it is critical to discover new therapeutics to treat prostate cancer. Diosgenin is a steroidal saponin from Trigonella foenum graecum, which has been previously identified to exert anti-tumor properties. Neural precursor cell expressed developmentally down-regulated protein 4 (NEDD4) is an E3 ligase that degrades multiple different proteins, and plays an oncogenic role in human cancer. In this study, we explore the molecular mechanism by which diosgenin mediates anti-tumor effects in prostate cancer cells. We found that diosgenin treatment led to cell growth inhibition, apoptosis and cell cycle arrest. Notably, we found that diosgenin inhibited the expression of NEDD4 in prostate cancer cells. Furthermore, overexpression of NEDD4 overcame the diosgenin-mediated anti-tumor activity, while downregulation of NEDD4 promoted the diosgenin-induced anti-cancer function in prostate cancer cells. Our findings indicate that diosgenin is a potential new inhibitor of NEDD4 in prostate cancer cells.

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