Genetic polymorphisms linked to extreme postorthodontic external apical root resorption in Koreans.

BACKGROUND: External apical root resorption (EARR) is a common undesirable outcome of orthodontic treatment, this study aimed to identify genetic polymorphisms associated with the susceptibility to extreme orthodontic-induced EARR in a Korean population using extreme phenotype analysis sampling. METHODS: Genomic DNA was isolated from the saliva of 77 patients who underwent orthodontic treatment involving two maxillary premolar extractions. The patients were divided into two groups based on EARR values measured on periapical radiographs: The significant resorption group (SG, EARR ≥ 4 mm) and the normal group (NG, EARR < 2 mm). In the NG group, patients with EARR < 1 mm were named the non-resorption group (NonG). Targeted next-generation sequencing was performed using the screened single nucleotide polymorphisms (SNPs), and firth logistic regression analysis was used to determine genetic associations with EARR. Haplotype-based association analysis was performed for specific SNPs. RESULTS: SNPs related to genes TNFSF11, TNFRSF11B, WNT3A, SFRP2, LRP6, P2RX7, and LRP1 were found to be significantly associated with severe EARR (p < 0.05, pre-Bonferroni correction p-values). Additionally, the haplotype CCA of rs17525809, rs208294, and rs1718119 P2RX7 had a higher frequency in the SG group. CONCLUSION: Extreme phenotype analysis has identified eleven SNPs related to genes TNFSF11, TNFRSF11B, WNT3A, SFRP2, LRP6, P2RX7, and LRP1 that are associated with severe root resorption in the Korean population. These findings will contribute to the development of predictive diagnostic tools for identifying severe root resorption that may occur during orthodontic treatment.

Clinical and Genetic Analysis of Multiple Idiopathic Cervical Root Resorption.

OBJECTIVE: To explore the genetic background and clinical phenotypes of multiple idiopathic cervical root resorption (MICRR) in a Chinese family. METHODS: The proband and his three family members were clinically examined and had radiographs taken with a radiovisiography (RVG) system and CBCT to define the diagnosis of MICRR. Genomic DNA (gDNA) was extracted from peripheral blood samples of the patient, his father, mother and younger sister for whole exome sequencing (WES). The pathogenicity of rare variants with minor allele frequency (MAF) less than 0.005 were analysed following possible inheritance patterns, predicted results from 12 software programs, the American College of Medical Genetics (ACMG) 2015 criteria, and information from ClinVar, OMIM and HGMD databases as well as gene function. RESULTS: The proband presented the typical MICRR phenotypes such as thin cervical pulp wall and apple core-like lesions in radiographs. Following the recessive inheritance pattern, WES analysis identified SHROOM2, SYTL5, MAGED1 and FLNA with a higher chance of causing MICRR. Four genes with compound heterozygous variants and another 27 genes with de novo variants either in autosomal-dominant or autosomal-recessive pattern were also found to have the potential pathogenicity. CONCLUSION: A total of 35 novel potential pathogenic genes were found to be associated with MICRR from a Chinese family through WES. The new genetic background of MICRR may be helpful for clinical and molecular diagnosis.

Association of genetic polymorphism of interleukin 1-alpha and interleukin 1-beta with external apical root resorption in orthodontic patients.

OBJECTIVE: To assess the allele rs 1143634 in IL-1ß and rs1800587 in IL-1α in patients for orthodontically induced external apical root resorption (EARR). MATERIAL AND METHODS: Intra-oral periapical radiograph (IOPA) of maxillary incisors of 142 Patients were evaluated for resorption at two time points; before the start of fixed mechanotherapy (T1) and after one year of treatment (T2). The individuals with root resorption<2mm were categorized as a control group (group 1; n=90), and resorption>2mm were categorized as case group (group 2; n=52). Buccal swabs of all patients were taken and DNA could be isolated in 95 out of 142 samples (group 1 {n=58}, group 2 {n=37}), which were then screened for the selected two polymorphic targets to determine the nucleotide status of these targets. Tetra-primer ARMS PCR reactions were carried out using all 4 primers for each polymorphism. RESULTS: rs11800587 was not associated with risk of EARR in any inheritance model. Chi-square test for association of alleles with EARR revealed that rs1143634 was associated with the risk of EARR in an allelic model in such a way that A allele of this SNP increased the risk of EARR 4 folds [OR=4.375; P=0.016]. However, the adjusted level of significance using the Holm-Bonferroni method for rs1143634 was P<0.010 for A and G comparison rendering the results non-significant. CONCLUSION: SNP rs1143634 and SNP rs11800587 were not associated with risk of EARR in any inheritance model.

Murine IRF8 Mutation Offers New Insight into Osteoclast and Root Resorption.

Interferon regulatory factor 8 (IRF8), a transcription factor expressed in immune cells, functions as a negative regulator of osteoclasts and helps maintain dental and skeletal homeostasis. Previously, we reported that a novel mutation in the IRF8 gene increases susceptibility to multiple idiopathic cervical root resorption (MICRR), a form of tooth root resorption mediated by increased osteoclast activity. The IRF8 G388S variant in the highly conserved C-terminal motif is predicted to alter the protein structure, likely impairing IRF8 function. To investigate the molecular basis of MICRR and IRF8 function in osteoclastogenesis, we generated Irf8 knock-in (KI) mice using CRISPR/Cas9 technique modeling the human IRF8G388S mutation. The heterozygous (Het) and homozygous (Homo) Irf8 KI mice showed no gross morphological defects, and the development of hematopoietic cells was unaffected and similar to wild-type (WT) mice. The Irf8 KI Het and Homo mice showed no difference in macrophage gene signatures important for antimicrobial defenses and inflammatory cytokine production. Consistent with the phenotype observed in MICRR patients, Irf8 KI Het and Homo mice demonstrated significantly increased osteoclast formation and resorption activity in vivo and in vitro when compared to WT mice. The oral ligature-inserted Het and Homo mice displayed significantly increased root resorption and osteoclast-mediated alveolar bone loss compared to WT mice. The increased osteoclastogenesis noted in KI mice is due to the inability of IRF8G388S mutation to inhibit NFATc1-dependent transcriptional activation and downstream osteoclast specific transcripts, as well as its impact on autophagy-related pathways of osteoclast differentiation. This translational study delineates the IRF8 domain important for osteoclast function and provides novel insights into the IRF8 mutation associated with MICRR. IRF8G388S mutation mainly affects osteoclastogenesis while sparing immune cell development and function. These insights extend beyond oral health and significantly advance our understanding of skeletal disorders mediated by increased osteoclast activity and IRF8's role in osteoclastogenesis.

Circadian clock genes REV-ERBα regulates the secretion of IL-1ß in deciduous tooth pulp stem cells by regulating autophagy in the process of physiological root resorption of deciduous teeth.

Physiological root resorption is a common occurrence during the development of deciduous teeth in children. Previous research has shown that the regulation of the inflammatory microenvironment through autophagy in DDPSCs is a significant factor in this process. However, it remains unclear why there are variations in the autophagic status of DDPSCs at different stages of physiological root resorption. To address this gap in knowledge, this study examines the relationship between the circadian clock of DDPSCs, the autophagic status, and the periodicity of masticatory behavior. Samples were collected from deciduous teeth at various stages of physiological root resorption, and DDPSCs were isolated and cultured for analysis. The results indicate that the circadian rhythm of important autophagy genes, such as Beclin-1 and LC3, and the clock gene REV-ERBα in DDPSCs, disappears under mechanical stress. Additionally, the study found that REV-ERBα can regulate Beclin-1 and LC3. Evidence suggests that mechanical stress is a trigger for the regulation of autophagy via REV-ERBα. Overall, this study highlights the importance of mechanical stress in regulating autophagy of DDPSCs via REV-ERBα, which affects the formation of the inflammatory microenvironment and plays a critical role in physiological root resorption in deciduous teeth.

Tooth resorptions are not hereditary

ABSTRACT Root resorptions caused by orthodontic movement are not supported by consistent scientific evidence that correlate them with heredity, individual predisposition and genetic or familial susceptibility. Current studies are undermined by methodological and interpretative errors, especially regarding the diagnosis and measurements of root resorption from orthopantomographs and cephalograms. Samples are heterogeneous insofar as they comprise different clinical operators, varied types of planning, and in insufficient number, in view of the prevalence of tooth resorptions in the population. Nearly all biological events are coded and managed through genes, but this does not mean tooth resorptions are inherited, which can be demonstrated in heredograms and other methods of family studies. In orthodontic root resorption, one cannot possibly determine percentages of how much would be due to heredity or genetics, environmental factors and unknown factors. There is no need to lay the blame of tooth resorptions on events taking place outside the orthodontic realm since in the vast majority of cases, resorptions are not iatrogenic. In orthodontic practice, when all teeth are analyzed and planned using periapical radiography or computerized tomography, and when considering all predictive factors, tooth resorptions are not iatrogenic in nature and should be considered as one of the clinical events inherent in the treatment applied.

RESUMO As reabsorções radiculares decorrentes da movimentação ortodôntica não têm evidência científica consistente que as correlacione com a hereditariedade, predisposição e suscetibilidade genética ou familiar. Os trabalhos sobre esse tema apresentam erros metodológicos e interpretativos, em especial quanto ao diagnóstico e à mensuração das reabsorções radiculares a partir de ortopantomografias e cefalogramas. As amostras são heterogêneas - quanto aos operadores clínicos e tipos de planejamentos aplicados - e em número muito pequeno, considerando-se a prevalência das reabsorções dentárias na população. Quase todos os eventos biológicos são codificados e gerenciados a partir dos genes, mas não por isso as reabsorções dentárias são hereditárias, o que seria demonstrado em heredogramas e outras formas de estudos familiares. Nas reabsorções radiculares em Ortodontia, não é possível determinar percentuais de quanto seria decorrente da hereditariedade ou da genética, de fatores ambientais e de fatores desconhecidos. Não se faz necessário transferir a "culpa" das reabsorções dentárias para eventos externos à Ortodontia pois, na grande maioria dos casos, elas não são iatrogênicas. Na prática ortodôntica, quando se faz a análise de todos os dentes e o planejamento, via radiografia periapical ou tomografia computadorizada, e quando se leva em consideração os fatores preditivos, as reabsorções dentárias não serão de natureza iatrogênica, e devem ser encaradas como uma das intercorrências clínicas do tratamento aplicado.

Polimorfismo (+3954c>T) del gen IL-1B y su asociación con la resorción radicular apical externa post-tratamiento ortodóntico / IL-1B (+3954c>T) gene polymorphism and its association with external root resorption after orthodontic treatment

El objetivo fue determinar la presencia del polimorfismo rs1143634 (+3954C>T) del gen Interleuquina 1 Beta (IL-1B) y su asociación con la resorción radicular apical externa (RRE) post-tratamiento ortodóntico. Se realizó un estudio piloto de individuos tratados con aparatología ortodontica, 13 (casos) presentaron RRE posterior al tratamiento ortodóntico y 22 (controles) estaban clínicamente sanos. A partir de muestras de células epiteliales de mucosa bucal se extrajo ADN y se genotipificó el polimorfismo rs1143634 (+3954C>T) del gen IL-1B mediante la reacción en cadena de la polimerasa y digestión del producto con la enzima de restricción TaqI. Se estimaron las frecuencias alélicas y genotípicas del rs1143634; además, se evaluó la desviación del equilibrio de Hardy-Weinberg. Las frecuencias alélicas y genotípicas se compararon mediante la prueba de c2 con razón deverosimilitud (p <0,05). El promedio de edad de los participantes fue 28,1 (DE=11,5) años y el 68,6 % era mujeres. Al comparar la distribución de los genotipos del polimorfismo IL-1B (+3954C>T) entre grupos no se encontró una diferencia estadísticamente significativa (p=0,0926). Sin embargo, se observó una diferencia significativa en la distribución de alelos (p= 0,035), siendo el alelo T (alelo 2) más prevalente en el grupo control. El polimorfismo IL-1B (+3954C>T) se encontró presente en la población de estudio. Aunque no existieron diferencias en la distribución de los genotipos que apoyara una asociación entre este polimorfismo y la RRE, si hubo una diferencia en la distribución de los alelos, sugiriendo que el alelo T posiblemente actúa como factor protector contra el desarrollo de la RRE.

The objective of this study was to determine the presence of Interleukin 1 beta (IL-1B) rs1143634 (+3954C>T) gene polymorphism and its association with external apical root resorption (ERR) after orthodontic treatment. We conducted a pilot study of individuals treated with orthodontic treatment, 13 (cases) had ERR after orthodontic treatment and 22 (controls) were clinically healthy. DNA was extracted from samples of epithelial cells from the oral cavity and IL-1B rs1143634 (+3954C>T) gene polymorphism was genotyped by polymerase chain reaction and digestion product through the TaqI restriction enzyme. Genotype and allele frequencies of rs1143634 were estimated; in addition, the deviation from Hardy-Weinberg equilibrium was assessed. Allele and genotype frequencies were compared using the c2 test with likelihood ratio (p <0.05). The mean age of participants was 28.6 (SD= 11.5) years and 68.6 % were females. No statistically significant association was found between the genotypes distribution of IL-1B (+3954C>T) polymorphism with ERR (p= 0.0926). However, a significant difference in the alleles distribution (p= 0.035) was observed, where the allele T (allele 2) was more prevalent in the control group. IL-1B (+3954C>T) polymorphism was present in the study population. Although there were no differences in the genotypes distribution to support an association between this polymorphism with ERR, there was a difference in the alleles distribution, suggesting that the allele T possibly acts as a protective factor against the development of ERR.