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A posteriori correction of camera characteristics from large image data sets.
Afanasyev, Pavel; Ravelli, Raimond B G; Matadeen, Rishi; De Carlo, Sacha; van Duinen, Gijs; Alewijnse, Bart; Peters, Peter J; Abrahams, Jan-Pieter; Portugal, Rodrigo V; Schatz, Michael; van Heel, Marin.
Afiliación
  • Afanasyev P; 1] Leiden Institute of Chemistry, Leiden University, 2333 CC Leiden, The Netherlands [2] The Institute of Nanoscopy, Maastricht University, 6211 LK Maastricht, The Netherlands.
  • Ravelli RB; The Institute of Nanoscopy, Maastricht University, 6211 LK Maastricht, The Netherlands.
  • Matadeen R; Netherlands Centre for Electron Nanoscopy (NeCEN), 2333 CC Leiden, The Netherlands.
  • De Carlo S; 1] Netherlands Centre for Electron Nanoscopy (NeCEN), 2333 CC Leiden, The Netherlands [2] FEI Company, 5651 GG Eindhoven, The Netherlands.
  • van Duinen G; FEI Company, 5651 GG Eindhoven, The Netherlands.
  • Alewijnse B; 1] Leiden Institute of Chemistry, Leiden University, 2333 CC Leiden, The Netherlands [2] The Institute of Nanoscopy, Maastricht University, 6211 LK Maastricht, The Netherlands.
  • Peters PJ; The Institute of Nanoscopy, Maastricht University, 6211 LK Maastricht, The Netherlands.
  • Abrahams JP; Leiden Institute of Chemistry, Leiden University, 2333 CC Leiden, The Netherlands.
  • Portugal RV; Brazilian Nanotechnology National Laboratory - LNNano, CNPEM, C.P. 6192, 13083-970 Campinas SP, Brasil.
  • Schatz M; Image Science Software GmbH, Gillweg 3, D-14193 Berlin, Germany.
  • van Heel M; 1] Leiden Institute of Chemistry, Leiden University, 2333 CC Leiden, The Netherlands [2] Brazilian Nanotechnology National Laboratory - LNNano, CNPEM, C.P. 6192, 13083-970 Campinas SP, Brasil [3] Faculty of Natural Sciences, Imperial College London, London SW7 2AZ, UK.
Sci Rep ; 5: 10317, 2015 Jun 11.
Article en En | MEDLINE | ID: mdl-26068909
ABSTRACT
Large datasets are emerging in many fields of image processing including electron microscopy, light microscopy, medical X-ray imaging, astronomy, etc. Novel computer-controlled instrumentation facilitates the collection of very large datasets containing thousands of individual digital images. In single-particle cryogenic electron microscopy ("cryo-EM"), for example, large datasets are required for achieving quasi-atomic resolution structures of biological complexes. Based on the collected data alone, large datasets allow us to precisely determine the statistical properties of the imaging sensor on a pixel-by-pixel basis, independent of any "a priori" normalization routinely applied to the raw image data during collection ("flat field correction"). Our straightforward "a posteriori" correction yields clean linear images as can be verified by Fourier Ring Correlation (FRC), illustrating the statistical independence of the corrected images over all spatial frequencies. The image sensor characteristics can also be measured continuously and used for correcting upcoming images.

Texto completo: 1 Base de datos: MEDLINE Idioma: En Revista: Sci Rep Año: 2015 Tipo del documento: Article País de afiliación: Países Bajos

Texto completo: 1 Base de datos: MEDLINE Idioma: En Revista: Sci Rep Año: 2015 Tipo del documento: Article País de afiliación: Países Bajos