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[Genetic diversity and phylogenetic analysis of Fusarium oxysporium strains isolated from the Cucurbitaceae hosts revealed by SRAPs]. / 瓜类枯萎病菌遗传多样性和亲缘关系的SRAP分析.
Tian, Ye Han; Hou, Yuan Yuan; Peng, Cai Yun; Wang, Yong Yang; He, Bang Ling; Gao, Ke Xiang.
Afiliación
  • Tian YH; College of Plant Protection, Shandong Agricultural University/Shandong Province Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Tai'an 271018, Shandong, China.
  • Hou YY; College of Plant Protection, Shandong Agricultural University/Shandong Province Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Tai'an 271018, Shandong, China.
  • Peng CY; College of Plant Protection, Shandong Agricultural University/Shandong Province Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Tai'an 271018, Shandong, China.
  • Wang YY; College of Plant Protection, Shandong Agricultural University/Shandong Province Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Tai'an 271018, Shandong, China.
  • He BL; College of Plant Protection, Shandong Agricultural University/Shandong Province Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Tai'an 271018, Shandong, China.
  • Gao KX; College of Plant Protection, Shandong Agricultural University/Shandong Province Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Tai'an 271018, Shandong, China.
Ying Yong Sheng Tai Xue Bao ; 28(3): 947-956, 2017 Mar 18.
Article en Zh | MEDLINE | ID: mdl-29741024
Cucurbitaceae wilt of different hosts could be caused by Fusarium oxysporum. To clear the genetic diversity and phylogenetic relationship of F. oxysporum isolates from different Cucurbitaceae hosts and regions, genomic DNA of ninety-five strains of F. oxysporum isolated from different hosts and different regions were amplified by sequence-related amplified polymorphism (SRAP) molecular markers. All strains could be uniquely distinguished with 238 polymorphism bands which generated 100% of polymorphic ratio with 19 selective primer pairs. On average, each primer pairs amplified 12.5 loci and 12.5 polymorphic loci. A total of 166 bands of F. oxysporum f. sp. momordicae (FOM) were amplified, among which 145 polymorphic bands generated 87.4% of polymorphic ratio. On average, each primer combination amplified 8.7 loci and 7.7 polymorphic loci. This indicated that genetic variation of F. oxysporum was extensive. The genetic similarity coefficient of F. oxysporum was 0.68-0.99, and the average indexes of Nei's genetic diversity and Shannon were 0.2390 and 0.3718, respectively. Ninety-five strains of F. oxysporum were divided into four formae speciales from bitter gourd, cucumber, watermelon and melon, when the genetic similarity coefficient was 0.74. In SRAP dendrogram all the FOM isolates were gathered into one phylogenetic branch with the genetic similarity coefficient ranging from 0.78 to 0.99. The average indexes of Nei's genetic diversity and Shannon indices were 0.1811 and 0.2750, respectively. This indicated that genetic diversity of FOM was abundant, and the classification of phylogenetic group was related to geographic origin to some extent.
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Texto completo: 1 Base de datos: MEDLINE Asunto principal: Variación Genética / Cucurbitaceae / Fusarium Idioma: Zh Revista: Ying Yong Sheng Tai Xue Bao Asunto de la revista: SAUDE AMBIENTAL Año: 2017 Tipo del documento: Article País de afiliación: China

Texto completo: 1 Base de datos: MEDLINE Asunto principal: Variación Genética / Cucurbitaceae / Fusarium Idioma: Zh Revista: Ying Yong Sheng Tai Xue Bao Asunto de la revista: SAUDE AMBIENTAL Año: 2017 Tipo del documento: Article País de afiliación: China