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Near-term forecasting of companion animal tick paralysis incidence: An iterative ensemble model.
Clark, Nicholas J; Proboste, Tatiana; Weerasinghe, Guyan; Soares Magalhães, Ricardo J.
Afiliación
  • Clark NJ; UQ Spatial Epidemiology Laboratory, School of Veterinary Science, the University of Queensland, Gatton, Queensland, Australia.
  • Proboste T; UQ Spatial Epidemiology Laboratory, School of Veterinary Science, the University of Queensland, Gatton, Queensland, Australia.
  • Weerasinghe G; Department of Agriculture, Water and the Environment, Canberra, Australia.
  • Soares Magalhães RJ; UQ Spatial Epidemiology Laboratory, School of Veterinary Science, the University of Queensland, Gatton, Queensland, Australia.
PLoS Comput Biol ; 18(2): e1009874, 2022 02.
Article en En | MEDLINE | ID: mdl-35171905
ABSTRACT
Tick paralysis resulting from bites from Ixodes holocyclus and I. cornuatus is one of the leading causes of emergency veterinary admissions for companion animals in Australia, often resulting in death if left untreated. Availability of timely information on periods of increased risk can help modulate behaviors that reduce exposures to ticks and improve awareness of owners for the need of lifesaving preventative ectoparasite treatment. Improved awareness of clinicians and pet owners about temporal changes in tick paralysis risk can be assisted by ecological forecasting frameworks that integrate environmental information into statistical time series models. Using an 11-year time series of tick paralysis cases from veterinary clinics in one of Australia's hotspots for the paralysis tick Ixodes holocyclus, we asked whether an ensemble model could accurately forecast clinical caseloads over near-term horizons. We fit a series of statistical time series (ARIMA, GARCH) and generative models (Prophet, Generalised Additive Model) using environmental variables as predictors, and then combined forecasts into a weighted ensemble to minimise prediction interval error. Our results indicate that variables related to temperature anomalies, levels of vegetation moisture and the Southern Oscillation Index can be useful for predicting tick paralysis admissions. Our model forecasted tick paralysis cases with exceptional accuracy while preserving epidemiological interpretability, outperforming a field-leading benchmark Exponential Smoothing model by reducing both point and prediction interval errors. Using online particle filtering to assimilate new observations and adjust forecast distributions when new data became available, our model adapted to changing temporal conditions and provided further reduced forecast errors. We expect our model pipeline to act as a platform for developing early warning systems that can notify clinicians and pet owners about heightened risks of environmentally driven veterinary conditions.
Asunto(s)

Texto completo: 1 Base de datos: MEDLINE Asunto principal: Parálisis por Garrapatas / Ixodes Tipo de estudio: Incidence_studies / Prognostic_studies / Risk_factors_studies Límite: Animals País/Región como asunto: Oceania Idioma: En Revista: PLoS Comput Biol Asunto de la revista: BIOLOGIA / INFORMATICA MEDICA Año: 2022 Tipo del documento: Article País de afiliación: Australia

Texto completo: 1 Base de datos: MEDLINE Asunto principal: Parálisis por Garrapatas / Ixodes Tipo de estudio: Incidence_studies / Prognostic_studies / Risk_factors_studies Límite: Animals País/Región como asunto: Oceania Idioma: En Revista: PLoS Comput Biol Asunto de la revista: BIOLOGIA / INFORMATICA MEDICA Año: 2022 Tipo del documento: Article País de afiliación: Australia