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Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons.
Sørensen, Erik F; Harris, R Alan; Zhang, Liye; Raveendran, Muthuswamy; Kuderna, Lukas F K; Walker, Jerilyn A; Storer, Jessica M; Kuhlwilm, Martin; Fontsere, Claudia; Seshadri, Lakshmi; Bergey, Christina M; Burrell, Andrew S; Bergman, Juraj; Phillips-Conroy, Jane E; Shiferaw, Fekadu; Chiou, Kenneth L; Chuma, Idrissa S; Keyyu, Julius D; Fischer, Julia; Gingras, Marie-Claude; Salvi, Sejal; Doddapaneni, Harshavardhan; Schierup, Mikkel H; Batzer, Mark A; Jolly, Clifford J; Knauf, Sascha; Zinner, Dietmar; Farh, Kyle K-H; Marques-Bonet, Tomas; Munch, Kasper; Roos, Christian; Rogers, Jeffrey.
Afiliación
  • Sørensen EF; Bioinformatics Research Centre, Aarhus University, 8000 Aarhus, Denmark.
  • Harris RA; Human Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
  • Zhang L; Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany.
  • Raveendran M; Human Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
  • Kuderna LFK; Institute of Evolutionary Biology (UPF-CSIC), PRBB, Dr. Aiguader 88, 08003 Barcelona, Spain.
  • Walker JA; Artificial Intelligence Lab, Illumina Inc., San Diego, CA 92122, USA.
  • Storer JM; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
  • Kuhlwilm M; Institute for Systems Biology, Seattle, WA 98109, USA.
  • Fontsere C; Institute of Evolutionary Biology (UPF-CSIC), PRBB, Dr. Aiguader 88, 08003 Barcelona, Spain.
  • Seshadri L; Department of Evolutionary Anthropology, University of Vienna, 1030 Vienna, Austria.
  • Bergey CM; Human Evolution and Archaeological Sciences (HEAS), University of Vienna, 1030 Vienna, Austria.
  • Burrell AS; Institute of Evolutionary Biology (UPF-CSIC), PRBB, Dr. Aiguader 88, 08003 Barcelona, Spain.
  • Bergman J; Primate Genetics Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany.
  • Phillips-Conroy JE; Department of Genetics, Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ 08854, USA.
  • Shiferaw F; Department of Anthropology, New York University, New York, NY 10003, USA.
  • Chiou KL; Bioinformatics Research Centre, Aarhus University, 8000 Aarhus, Denmark.
  • Chuma IS; Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, 8000 Aarhus C, Denmark.
  • Keyyu JD; Department of Neuroscience, Washington University School of Medicine in St. Louis, St. Louis, MO 63110, USA.
  • Fischer J; Department of Anthropology, Washington University in St. Louis, St. Louis, MO 63130, USA.
  • Gingras MC; The Carter Center Ethiopia, Addis Ababa, Ethiopia.
  • Salvi S; Center for Evolution and Medicine, Arizona State University, Tempe, AZ 85281, USA.
  • Doddapaneni H; School of Life Sciences, Arizona State University, Tempe, AZ 85281, USA.
  • Schierup MH; Tanzania National Parks, Arusha, Tanzania.
  • Batzer MA; Tanzania Wildlife Research Institute, Arusha, Tanzania.
  • Jolly CJ; Cognitive Ethology Laboratory, German Primate Center, Leibniz Institute for Primate Research, 37077 Göttingen, Germany.
  • Knauf S; Department of Primate Cognition, Georg-August-Universität Göttingen, 37077 Göttingen, Germany.
  • Zinner D; Leibniz ScienceCampus Primate Cognition, 37077 Göttingen, Germany.
  • Farh KK; Human Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
  • Marques-Bonet T; Human Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
  • Munch K; Human Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
  • Roos C; Bioinformatics Research Centre, Aarhus University, 8000 Aarhus, Denmark.
  • Rogers J; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Science ; 380(6648): eabn8153, 2023 06 02.
Article en En | MEDLINE | ID: mdl-37262153
ABSTRACT
Baboons (genus Papio) are a morphologically and behaviorally diverse clade of catarrhine monkeys that have experienced hybridization between phenotypically and genetically distinct phylogenetic species. We used high-coverage whole-genome sequences from 225 wild baboons representing 19 geographic localities to investigate population genomics and interspecies gene flow. Our analyses provide an expanded picture of evolutionary reticulation among species and reveal patterns of population structure within and among species, including differential admixture among conspecific populations. We describe the first example of a baboon population with a genetic composition that is derived from three distinct lineages. The results reveal processes, both ancient and recent, that produced the observed mismatch between phylogenetic relationships based on matrilineal, patrilineal, and biparental inheritance. We also identified several candidate genes that may contribute to species-specific phenotypes.
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Texto completo: 1 Base de datos: MEDLINE Asunto principal: Papio / Flujo Génico / Evolución Biológica Tipo de estudio: Prognostic_studies Límite: Animals Idioma: En Revista: Science Año: 2023 Tipo del documento: Article País de afiliación: Dinamarca
Texto completo
Imprimir
XML
PubMed Links
Buscar en Google

Texto completo: 1 Base de datos: MEDLINE Asunto principal: Papio / Flujo Génico / Evolución Biológica Tipo de estudio: Prognostic_studies Límite: Animals Idioma: En Revista: Science Año: 2023 Tipo del documento: Article País de afiliación: Dinamarca