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Photodissociation of leucine-enkephalin protonated peptide: an experimental and theoretical perspective.
Martínez-Fernández, Lara; Rankovic, Milos Lj; Canon, Francis; Nahon, Laurent; Giuliani, Alexandre; Milosavljevic, Aleksandar R; Martin-Somer, Ana.
Afiliación
  • Martínez-Fernández L; Departamento de Química Física de Materiales, Instituto de Química Física de Materiales, Instituto de Química Física Blas Cabrera, CSIC 28006 Madrid Spain.
  • Rankovic ML; Institute of Physics Belgrade, University of Belgrade Pregrevica 118 11080 Belgrade Serbia.
  • Canon F; SOLEIL l'Orme des Merisiers, St Aubin, BP48, F-91192 Gif sur Yvette Cedex France.
  • Nahon L; SOLEIL l'Orme des Merisiers, St Aubin, BP48, F-91192 Gif sur Yvette Cedex France.
  • Giuliani A; SOLEIL l'Orme des Merisiers, St Aubin, BP48, F-91192 Gif sur Yvette Cedex France.
  • Milosavljevic AR; INRAE, Dpet. Transform UAR1008, Rue de la Géraudière, BP 71627 F-44316 Nantes France.
  • Martin-Somer A; SOLEIL l'Orme des Merisiers, St Aubin, BP48, F-91192 Gif sur Yvette Cedex France.
RSC Adv ; 14(24): 16809-16820, 2024 May 22.
Article en En | MEDLINE | ID: mdl-38784408
ABSTRACT
Understanding the competing processes that govern far ultraviolet photodissociation (FUV-PD) of biopolymers such as proteins is a challenge. Here, we report a combined experimental and theoretical investigation of FUV-PD of protonated leucine-enkephalin pentapeptide ([YGGFL + H]+) in the gas-phase. Time-dependent density functional theory (TD-DFT) calculations in combination with experiments and previous results for amino acids and shorter peptides help in rationalizing the evolution of the excited states. The results confirm that fragmentation of [YGGFL + H]+ results mainly from vibrationally excited species in the ground electronic state, populated after internal conversion. We also propose fragmentation mechanisms for specific photo-fragments such as tyrosine side chain loss (with an extra hydrogen) or hydrogen loss. In general, we observe the same mechanisms as for smaller peptides or protonated Tyr and Phe, that are not quenched by the presence of other amino acids. Nevertheless, we also found some differences, as for H loss, in part due to the fact that the charge is solvated by the peptide chain and not only by the COOH terminal group.

Texto completo: 1 Base de datos: MEDLINE Idioma: En Revista: RSC Adv Año: 2024 Tipo del documento: Article

Texto completo: 1 Base de datos: MEDLINE Idioma: En Revista: RSC Adv Año: 2024 Tipo del documento: Article