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1.
Metabolomics ; 18(3): 18, 2022 03 15.
Artigo em Inglês | MEDLINE | ID: mdl-35290545

RESUMO

INTRODUCTION: Marine biofilms are the most widely distributed mode of life on Earth and drive biogeochemical cycling processes of most elements. Phosphorus (P) is essential for many biological processes such as energy transfer mechanisms, biological information storage and membrane integrity. OBJECTIVES: Our aim was to analyze the effect of a gradient of ecologically relevant phosphate concentrations on the biofilm-forming capacity and the metabolome of the marine bacterium Pseudoalteromonas lipolytica TC8. METHODS: In addition to the evaluation of the effect of different phosphate concentration on the biomass, structure and gross biochemical composition of biofilms of P. lipolytica TC8, untargeted metabolomics based on liquid chromatography-mass spectrometry (LC-MS) analysis was used to determine the main metabolites impacted by P-limiting conditions. Annotation of the most discriminating and statistically robust metabolites was performed through the concomitant use of molecular networking and MS/MS fragmentation pattern interpretation. RESULTS: At the lowest phosphate concentration, biomass, carbohydrate content and three-dimensional structures of biofilms tended to decrease. Furthermore, untargeted metabolomics allowed for the discrimination of the biofilm samples obtained at the five phosphate concentrations and the highlighting of a panel of metabolites mainly implied in such a discrimination. A large part of the metabolites of the resulting dataset were then putatively annotated. Ornithine lipids were found in increasing quantity when the phosphate concentration decreased, while the opposite trend was observed for oxidized phosphatidylethanolamines (PEs). CONCLUSION: This study demonstrated the suitability of LC-MS-based untargeted metabolomics for evaluating the effect of culture conditions on marine bacterial biofilms. More precisely, these results supported the high plasticity of the membrane of P. lipolytica TC8, while the role of the oxidized PEs remains to be clarified.


Assuntos
Metabolômica , Pseudoalteromonas , Biofilmes , Metaboloma , Metabolômica/métodos , Fosfatos/farmacologia , Espectrometria de Massas em Tandem/métodos
2.
Environ Microbiol ; 23(11): 6777-6797, 2021 11.
Artigo em Inglês | MEDLINE | ID: mdl-34490980

RESUMO

In the context of global warming, this study aimed to assess the effect of temperature and irradiance on the macroalgal Taonia atomaria holobiont dynamics. We developed an experimental set-up using aquaria supplied by natural seawater with three temperatures combined with three irradiances. The holobiont response was monitored over 14 days using a multi-omics approach coupling algal surface metabolomics and metabarcoding. Both temperature and irradiance appeared to shape the microbiota and the surface metabolome, but with a distinct temporality. Epibacterial community first changed according to temperature, and later in relation to irradiance, while the opposite occurred for the surface metabolome. An increased temperature revealed a decreasing richness of the epiphytic community together with an increase of several bacterial taxa. Irradiance changes appeared to quickly impact surface metabolites production linked with the algal host photosynthesis (e.g. mannitol, fucoxanthin, dimethylsulfoniopropionate), which was hypothesized to explain modifications of the structure of the epiphytic community. Algal host may also directly adapt its surface metabolome to changing temperature with time (e.g. lipids content) and also in response to changing microbiota (e.g. chemical defences). Finally, this study brought new insights highlighting complex direct and indirect responses of seaweeds and their associated microbiota under changing environments.


Assuntos
Microbiota , Phaeophyceae , Alga Marinha , Bactérias/genética , Alga Marinha/microbiologia , Temperatura
3.
Mol Ecol ; 30(12): 2891-2904, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-33887078

RESUMO

Free-living (FL) marine microbial communities differ from those attached to particles (PA). Likewise, biofilms (B) colonizing artificial surfaces, including plastics or ship hulls, hardly resemble their planktonic surroundings. However, few studies have examined the effect of the environment on these lifestyles and on the source of organisms colonizing marine surfaces. Using 16S rRNA gene metabarcoding, we identified specificities of marine prokaryotic community lifestyles (FL, PA or B) sampled in three coastal polluted locations with dissimilar environmental conditions: the North-Western Mediterranean Sea and the Atlantic and Indian Oceans. Biofilms developed over polyvinyl chloride (PVC) were found to be significantly different from FL or PA collected during the immersions. Alpha-diversity increased from FL to PA and to B, illustrating the integrative aspect of the latter, with little proportion of operational taxonomic units shared with the first two. Beta-diversity clustered first the lifestyles and then the sites. FL and PA were more affected by water quality, especially by trace metal contamination, whereas B were as sensitive to trace metals as to nutrients. Although biofilms should be supplied by the planktonic (ultra) rare biosphere, source tracking could only detect small contributions of FL or PA taxa to B communities.


Assuntos
Biofilmes , Microbiota , Oceano Índico , Mar Mediterrâneo , Microbiota/genética , RNA Ribossômico 16S/genética
4.
Biofouling ; 36(4): 378-388, 2020 04.
Artigo em Inglês | MEDLINE | ID: mdl-32425065

RESUMO

Poly(dimethylsiloxane) (PDMS) elastomer coatings containing an amphiphilic hydrolyzable diblock copolymer additive were prepared and their potential as marine antifouling and antiadhesion materials was tested. The block copolymer additive consisted of a PDMS first block and a random poly(trialkylsilyl methacrylate (TRSiMA, R = butyl, isopropyl)-co-poly(ethyleneglycol) methacrylate (PEGMA) copolymer second block. PDMS-b-TRSiMA block copolymer additives without PEGMA units were also used as additives. The amphiphilic character of the coating surface was assessed in water using the captive air bubble technique for measurements of static and dynamic contact angles. The attachment of macro- and microorganisms on the coatings was evaluated by field tests and by performing adhesion tests to the barnacle Amphibalanus amphitrite and the green alga Ulva rigida. All the additive-based PDMS coatings showed better antiadhesion properties to A. amphitrite larvae than to U. rigida spores. Field tests provided meaningful information on the antifouling and fouling release activity of coatings over an immersion period of 23 months.


Assuntos
Incrustação Biológica , Polietilenoglicóis , Animais , Dimetilpolisiloxanos , Metacrilatos , Propriedades de Superfície
5.
Environ Microbiol ; 21(9): 3346-3363, 2019 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-30945796

RESUMO

An integrative multi-omics approach allowed monthly variations for a year of the surface metabolome and the epibacterial community of the Mediterranean Phaeophyceae Taonia atomaria to be investigated. The LC-MS-based metabolomics and 16S rDNA metabarcoding data sets were integrated in a multivariate meta-omics analysis (multi-block PLS-DA from the MixOmic DIABLO analysis) showing a strong seasonal covariation (Mantel test: p < 0.01). A network based on positive and negative correlations between the two data sets revealed two clusters of variables, one relative to the 'spring period' and a second to the 'summer period'. The 'spring period' cluster was mainly characterized by dipeptides positively correlated with a single bacterial taxon of the Alteromonadaceae family (BD1-7 clade). Moreover, 'summer' dominant epibacterial taxa from the second cluster (including Erythrobacteraceae, Rhodospirillaceae, Oceanospirillaceae and Flammeovirgaceae) showed positive correlations with few metabolites known as macroalgal antifouling defences [e.g. dimethylsulphoniopropionate (DMSP) and proline] which exhibited a key role within the correlation network. Despite a core community that represents a significant part of the total epibacteria, changes in the microbiota structure associated with surface metabolome variations suggested that both environment and algal host shape the bacterial surface microbiota.

6.
Anal Chem ; 90(8): 4978-4981, 2018 04 17.
Artigo em Inglês | MEDLINE | ID: mdl-29611700

RESUMO

Several alternatives are currently investigated to prevent and control the natural process of colonization of any seawater submerged surfaces by marine organisms. Since few years we develop an approach based on addressable electroactive coatings containing conducting polymers or polymers with lateral redox groups. In this article we describe the use of a screen-printed plate formed by 96 three-electrode electrochemical cells to assess the potential of these electroactive coatings to prevent the adhesion of marine bacteria. This novel platform is intended to control and record the redox properties of the electroactive coating in each well during the bioassay (15 h) and to allow screening its antiadhesion activity with enough replicates to support significant conclusions. Validation of this platform was carried out with poly(ethylenedioxythiophene) (PEDOT) as electroactive coating obtained by electropolymerization of EDOT monomer in artificial seawater electrolyte on the working electrode of each electrochemical cell of the 96-well microplate.

7.
Biofouling ; 34(6): 657-672, 2018 07.
Artigo em Inglês | MEDLINE | ID: mdl-30185057

RESUMO

Metabarcoding and metabolomics were used to explore the taxonomic composition and functional diversity of eukaryotic biofouling communities on plates with antifouling paints at two French coastal sites: Lorient (North Eastern Atlantic Ocean; temperate and eutrophic) and Toulon (North-Western Mediterranean Sea; mesotrophic but highly contaminated). Four distinct coatings were tested at each site and season for one month. Metabarcoding showed biocidal coatings had less impact on eukaryotic assemblages compared to spatial and temporal effects. Ciliophora, Chlorophyceae or Cnidaria (mainly hydrozoans) were abundant at Lorient, whereas Arthropoda (especially crustaceans), Nematoda, and Ochrophyta dominated less diversified assemblages at Toulon. Seasonal shifts were observed at Lorient, but not Toulon. Metabolomics also showed clear site discrimination, but these were associated with a coating and not season dependent clustering. The meta-omics analysis enabled identifications of some associative patterns between metabolomic profiles and specific taxa, in particular those colonizing the plates with biocidal coatings at Lorient.


Assuntos
Incrustação Biológica , Metabolômica , Cilióforos/fisiologia , Estações do Ano
8.
Biofouling ; 34(9): 1055-1063, 2018 10.
Artigo em Inglês | MEDLINE | ID: mdl-30626214

RESUMO

Much current research is focused on preventing and controlling the natural process of colonization by marine organisms of surfaces submerged in seawater. Previously, the authors' laboratory has reported the synthesis and the full physico-chemical characterization of homopolymers obtained from 1-ferrocenylmethyl methacrylate (FMMA), 2-(ferrocenylmethoxy)ethyl methacrylate (FMOEMA), and 3-(ferrocenylmethoxy)propyl methacrylate (FMOPMA). Here, the bacterial anti-adhesion activity of these homopolymers (pFMMA, pFMOEMA and pFMOPMA) is reported when stimulated in 96-well microplates containing a printed electrochemical cell in each well. Polymers were deposited on the printed carbon working electrode of each well in two columns each comprising eight wells. Their electrochemical anti-adhesion properties were evaluated by inoculating a marine biofilm forming bacterial strain, Pseudoalteramonas lipolytica, in each well and then applying recurrent scans for 15 h. The results revealed an intrinsic anti-adhesion activity of all the polymers. This activity was amplified by a factor of 10 when potential recurrent scans were applied.


Assuntos
Aderência Bacteriana/fisiologia , Incrustação Biológica/prevenção & controle , Técnicas Eletroquímicas/métodos , Compostos Ferrosos/química , Gammaproteobacteria/crescimento & desenvolvimento , Ácidos Polimetacrílicos/química , Biofilmes/crescimento & desenvolvimento , Carbono , Eletrodos , Metalocenos , Água do Mar/microbiologia
9.
Molecules ; 23(9)2018 Aug 29.
Artigo em Inglês | MEDLINE | ID: mdl-30158494

RESUMO

The evolution of regulations concerning biocidal products aimed towards an increased protection of the environment (e.g., EU Regulation No 528/2012) requires the development of new non-toxic anti-fouling (AF) systems. As the marine environment is an important source of inspiration, such AF systems inhibiting the adhesion of organisms without any toxicity could be based on molecules of natural origin. In this context, the antibiofilm potential of tropical microalgal extracts was investigated. The tropics are particularly interesting in terms of solar energy and temperatures which provide a wide marine diversity and a high production of microalgae. Twenty microalgal strains isolated from the Indian Ocean were studied. Their extracts were characterized in terms of global chemical composition by high resolution magic angle spinning (HR-MAS) and nuclear magnetic resonance (NMR) spectroscopy, toxicity against marine bacteria (viability and growth) and anti-adhesion effect. The different observations made by confocal laser scanning microscopy (CLSM) showed a significant activity of three extracts from Dinoflagellate strains against the settlement of selected marine bacteria without any toxicity at a concentration of 50 µg/mL. The Symbiodinium sp. (P-78) extract inhibited the adhesion of Bacillus sp. 4J6 (Atlantic Ocean), Shewanella sp. MVV1 (Indian Ocean) and Pseudoalteromonas lipolytica TC8 (Mediterranean Ocean) at 60, 76 and 52%, respectively. These results underlined the potential of using microalgal extracts to repel fouling organisms.


Assuntos
Antibacterianos/farmacologia , Aderência Bacteriana/efeitos dos fármacos , Metanol/farmacologia , Microalgas/química , Oceano Atlântico , Bactérias/efeitos dos fármacos , Biofilmes/efeitos dos fármacos , Oceano Índico , Mar Mediterrâneo , Microalgas/isolamento & purificação , Testes de Sensibilidade Microbiana , Microbiologia da Água
10.
Microb Ecol ; 74(3): 585-598, 2017 10.
Artigo em Inglês | MEDLINE | ID: mdl-28374061

RESUMO

Surface colonization in seawater first corresponds to the selection of specific microbial biofilm communities. By coupling flow cytometry, microscopy and high throughput sequencing (HTS, 454 pyrosequencing) with artificial surfaces and environmental analyses, we intend to identify the contribution of biofilm community drivers at two contrasted French sites, one temperate and eutrophic (Lorient, Atlantic coast) and the other at a mesotrophic but highly contaminated bay (Toulon, North-Western Mediterranean Sea). Microbial communities were shaped by high temperatures, salinity and lead at Toulon by but nutrients and DOC at Lorient. Coatings including pyrithione exhibited a significant decrease of their microbial densities except for nanoeukaryotes. Clustering of communities was mainly based on the surface type and secondly the site, whereas seasons appeared of less importance. The in-depth HTS revealed that γ- and α-proteobacteria, but also Bacteroidetes, dominated highly diversified bacterial communities with a relative low ß-diversity. Sensitivity to biocides released by the tested antifouling coatings could be noticed at different taxonomic levels: the percentage of Bacteroidetes overall decreased with the presence of pyrithione, whereas the α/γ-proteobacteria ratio decreased at Toulon when increased at Lorient. Small diatom cells (Amphora and Navicula spp.) dominated on all surfaces, whereas site-specific sub-dominant taxa appeared clearly more sensitive to biocides. This overall approach exhibited the critical significance of surface characteristics in biofilm community shaping.


Assuntos
Fenômenos Fisiológicos Bacterianos , Biofilmes/crescimento & desenvolvimento , Incrustação Biológica , Diatomáceas/fisiologia , Água do Mar/microbiologia , Oceano Atlântico , Incrustação Biológica/prevenção & controle , Citometria de Fluxo , França , Mar Mediterrâneo , Estações do Ano , Análise de Sequência de DNA
11.
Biofouling ; 32(7): 801-13, 2016 08.
Artigo em Inglês | MEDLINE | ID: mdl-27353006

RESUMO

This study aimed to improve understanding of the strategies developed by the Mediterranean seaweed Taonia atomaria to chemically control bacterial epibiosis. An experimental protocol was optimized to specifically extract algal surface-associated metabolites by a technique involving dipping in organic solvents whilst the integrity of algal cell membranes was assessed by fluorescent microscopy. This methodology was validated using mass spectrometry-based profiles of algal extracts and analysis of their principal components, which led to the selection of methanol as the extraction solvent with a maximum exposure time of 15 s. Six compounds (A-F) were identified in the resulting surface extracts. Two of these surface-associated compounds (B and C) showed selective anti-adhesion properties against reference bacterial strains isolated from artificial surfaces while remaining inactive against epibiotic bacteria of T. atomaria. Such specificity was not observed for commercial antifouling biocides and other molecules identified in the surface or whole-cell extracts of T. atomaria.


Assuntos
Biofilmes/efeitos dos fármacos , Desinfetantes/isolamento & purificação , Phaeophyceae/metabolismo , Phaeophyceae/microbiologia , Alga Marinha/metabolismo , Alga Marinha/microbiologia , Bactérias/classificação , Aderência Bacteriana/efeitos dos fármacos , Desinfetantes/farmacologia , Mar Mediterrâneo , Metaboloma , Phaeophyceae/química , Alga Marinha/química , Propriedades de Superfície
12.
Appl Environ Microbiol ; 80(16): 4821-31, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24907329

RESUMO

When immersed in seawater, substrates are rapidly colonized by both micro- and macroorganisms. This process is responsible for important economic and ecological prejudices, particularly when related to ship hulls or aquaculture nets. Commercial antifouling coatings are supposed to reduce biofouling, i.e., micro- and macrofoulers. In this study, biofilms that primarily settled on seven different coatings (polyvinyl chloride [PVC], a fouling release coating [FRC], and five self-polishing copolymer coatings [SPC], including four commercial ones) were quantitatively studied, after 1 month of immersion in summer in the Toulon Bay (Northwestern Mediterranean Sea, France), by using flow cytometry (FCM), microscopy, and denaturing gradient gel electrophoresis. FCM was used after a pretreatment to separate cells from the biofilm matrix, in order to determine densities of heterotrophic bacteria, picocyanobacteria, and pico- and nanoeukaryotes on these coatings. Among diatoms, the only microphytobenthic class identified by microscopy, Licmophora, Navicula, and Nitzschia were determined to be the dominant taxa. Overall, biocide-free coatings showed higher densities than all other coatings, except for one biocidal coating, whatever the group of microorganisms. Heterotrophic bacteria always showed the highest densities, and diatoms showed the lowest, but the relative abundances of these groups varied depending on the coating. In particular, the copper-free SPC failed to prevent diatom settlement, whereas the pyrithione-free SPC exhibited high picocyanobacterial density. These results highlight the interest in FCM for antifouling coating assessment as well as specific selection among microbial communities by antifouling coatings.


Assuntos
Fenômenos Fisiológicos Bacterianos/efeitos dos fármacos , Biofilmes/efeitos dos fármacos , Incrustação Biológica/prevenção & controle , Diatomáceas/fisiologia , Polímeros/farmacologia , Água do Mar/microbiologia , Bactérias/classificação , Bactérias/efeitos dos fármacos , Bactérias/genética , Bactérias/isolamento & purificação , Diatomáceas/classificação , Diatomáceas/efeitos dos fármacos , Diatomáceas/isolamento & purificação , Mar Mediterrâneo , Cloreto de Polivinila/farmacologia , Navios
13.
Microorganisms ; 12(3)2024 Feb 22.
Artigo em Inglês | MEDLINE | ID: mdl-38543496

RESUMO

Plastics in the ocean create the "plastisphere", a diverse habitat hosting various life forms. Other than the pollution induced by plastics, the co-occurrence of primary producers, symbiotic organisms, decomposers, and pathogens within the plastisphere raises questions about how they influence the dynamics of marine ecosystems. Here, we used a shotgun DNA-sequencing approach to describe the species thriving on floating plastics collected in two Mediterranean sites. Our findings revealed many species of bacteria, eukaryotes, viruses, and archaea on each plastic. Proteobacteria was dominant (70% of reads in the entire dataset), with other groups such as Ascomycota fungi (11%) and Bacteroidetes (9%) also being represented. The community structure was not affected by the polymeric composition or the plastic shape. Notably, pathogenic Vibrio species, including V. campbelli, V. alginolyticus, and V. coralliilyticus, were among the most abundant species. Viruses, despite showing lower relative abundances, occurred in all samples, especially Herpesvirales, Caudovirales, and Poxviridae groups. A significant finding was the presence of the White Spot Syndrome virus (WSSV). This pathogen, responsible for devastating outbreaks in aquaculture systems, had not been previously reported in the marine plastisphere. Our study emphasizes the need for further investigation into the ecological and economic impacts of plastisphere organisms in the ocean.

14.
Environ Pollut ; 348: 123808, 2024 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-38521396

RESUMO

The term "Plastisphere" refers to the biofilm layer naturally formed by microorganisms attaching to plastic surfaces. This layer possesses the capability to adsorb persistent organic and inorganic pollutants, particularly trace metals, which are the focus of this research study. Immersion experiments were concurrently conducted in five locations spanning four European countries (France, Ireland, Spain, and Italy) utilising eight distinct polymers. These immersions, repeated every three months over a one-year period, aimed to evaluate the baseline bioaccumulation of 12 trace metals. The study underscores the intricate nature of metal bioaccumulation, influenced by both micro-scale factors (such as polymer composition) and macro-scale factors (including geographical site and seasonal variations). Villefranche Bay in France exhibited the lowest metals bioaccumulation, whereas Naples in Italy emerged as the site where bioaccumulation was often the highest for the considered metals. Environmental risk assessment was also conducted in the study. The lightweight nature of certain plastics allows them to be transported across significant distances in the ocean. Consequently, evaluating trace metal concentrations in the plastisphere is imperative for assessing potential environmental repercussions that plastics, along with their associated biota, may exert even in locations distant from their point of emission.


Assuntos
Poluentes Ambientais , Metais Pesados , Oligoelementos , Poluentes Químicos da Água , Bioacumulação , Poluentes Químicos da Água/análise , Metais , França , Polímeros , Monitoramento Ambiental , Metais Pesados/análise , Plásticos
15.
Environ Microbiol ; 15(11): 2879-93, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-23869714

RESUMO

The search for new antifouling (AF) coatings that are environmentally benign has led to renewed interest in the ways that micro-organisms colonize substrates in the marine environment. This review covers recently published research on the global species composition and dynamics of marine biofilms, consisting mainly of bacteria and diatoms found on man-made surfaces including AF coatings. Marine biofilms directly interact with larger organisms (macrofoulers) during colonization processes; hence, recent literature on understanding the basis of the biofilm/macrofouling interactions is essential and will also be reviewed here. Overall, differences have been identified in species composition between biofilm and planktonic forms for both diatoms and bacteria at various exposure sites. In most studies, the underlying biofilm was found to induce larval and spore settlement of macrofoulers; however, issues such as reproducibility, differences in exposure sites and biofilm composition (natural multispecies vs. monospecific species) may influence the outcomes.


Assuntos
Bactérias/efeitos dos fármacos , Biofilmes/efeitos dos fármacos , Diatomáceas/efeitos dos fármacos , Desinfetantes/farmacologia , Bactérias/crescimento & desenvolvimento , Biofilmes/classificação , Biofilmes/crescimento & desenvolvimento , Diatomáceas/crescimento & desenvolvimento , Desinfetantes/química , Esporos/efeitos dos fármacos , Esporos/crescimento & desenvolvimento , Propriedades de Superfície
16.
J Nat Prod ; 76(7): 1313-8, 2013 Jul 26.
Artigo em Inglês | MEDLINE | ID: mdl-23829580

RESUMO

Three new C29 sterols with a cyclopropane ring cyclized between C-26 and C-27 of the side chain, aragusterol I (1), 21-O-octadecanoyl-xestokerol A (4), and 7ß-hydroxypetrosterol (5b), were isolated from the Vietnamese marine sponge Xestospongia testudinaria, along with the known compounds, aragusterol B (2), xestokerol A (3), 7α-hydroxypetrosterol (5a), 7-oxopetrosterol (6), and petrosterol (7). The structures of the new compounds were established by analysis of spectroscopic data including 1D and 2D NMR, and high-resolution electrospray ionization mass spectrometry (HRESIMS). Their capacity to inhibit the adhesion of isolated bacteria from marine biofilms was evaluated against the bacterial strains Pseudoalteromonas sp. D41, Pseudoalteromonas sp. TC8, and Polaribacter sp. TC5. Aragusterol B (2) and 21-O-octadecanoyl-xestokerol A (4) exhibited the most potent antifouling activity with EC50 values close to these reported in the literature for tributyltin oxide, a marine anti-biofouling agent now considered to be a severe marine pollutant. Due to its comparable activity to tributyltin oxide and its absence of toxicity, the new 26,27-cyclosterol, 21-O-octadecanoyl-xestokerol A (4) constitutes a promising scaffold for further investigations.


Assuntos
Incrustação Biológica/prevenção & controle , Esteróis/isolamento & purificação , Esteróis/farmacologia , Xestospongia/química , Animais , Biologia Marinha , Estrutura Molecular , Ressonância Magnética Nuclear Biomolecular , Pseudoalteromonas/efeitos dos fármacos , Esteróis/química , Vietnã
17.
Mar Environ Res ; 192: 106241, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37922705

RESUMO

Biofouling is a specific lifestyle including both marine prokaryotic and eukaryotic communities. Hydrodynamics are poorly studied parameters affecting biofouling formation. This study aimed to investigate how water dynamics in the Etel Estuary (Northwest Atlantic coasts of France) influences the colonization of artificial substrates. Hydrodynamic conditions, mainly identified as shear stress, were characterized by measuring current velocity, turbulence intensity and energy using Acoustic Doppler Current Profiler (ADCP). One-month biofouling was analyzed by coupling metabarcoding (16S rRNA, 18S rRNA and COI genes), untargeted metabolomics (liquid chromatography coupled with high-resolution mass spectrometry, LC-HRMS) and characterization of the main biochemical components of the microbial exopolymeric matrix. A higher richness was observed for biofouling communities (prokaryotes and eukaryotes) exposed to the strongest currents. Ectopleura (Cnidaria) and its putative symbionts Endozoicomonas (Gammaproteobacteria) were dominant in the less dynamic conditions. Eukaryotes assemblages were specifically shaped by shear stress, leading to drastic changes in metabolite profiles. Under high hydrodynamic conditions, the exopolymeric matrix increased and was composed of 6 times more polysaccharides than proteins, these latter playing a crucial role in the adhesion and cohesion properties of biofilms. This original multidisciplinary approach demonstrated the importance of shear stress on both the structure of marine biofouling and the metabolic response of these complex communities.


Assuntos
Incrustação Biológica , Hidrodinâmica , RNA Ribossômico 16S , Estuários , Biofilmes
18.
Biofouling ; 28(5): 453-63, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22582937

RESUMO

Marine biofilm communities that developed on artificial substrata were investigated using molecular and microscopic approaches. Polystyrene, Teflon® and four antifouling (AF) paints were immersed for 2 weeks at two contrasting sites near Toulon on the French Mediterranean coast (Toulon military harbour and the natural protected area of Porquerolles Island). Biofilms comprising bacteria and diatoms were detected on all the coatings. The population structure as well as the densities of the microorganisms differed in terms of both sites and coatings. Lower fouling densities were observed at Porquerolles Island compared to Toulon harbour. All bacterial communities (analysed by PCR-DGGE) showed related structure, controlled both by the sites and the type of substrata. Pioneer microalgal communities were dominated by the same two diatom species, viz. Licmophora gracilis and Cylindrotheca closterium, at both sites, irrespective of the substrata involved. However, the density of diatoms followed the same trend at both sites with a significant effect of all the AF coatings compared to Teflon and polystyrene.


Assuntos
Bactérias/crescimento & desenvolvimento , Biofilmes/crescimento & desenvolvimento , Incrustação Biológica/prevenção & controle , Diatomáceas/crescimento & desenvolvimento , Pintura/microbiologia , Poliestirenos , Politetrafluoretileno , Água do Mar , Bactérias/classificação , Bactérias/genética , DNA Bacteriano/análise , DNA Bacteriano/genética , Diatomáceas/classificação , Diatomáceas/genética , Ecossistema , Eletroforese em Gel de Ágar , França , Mar Mediterrâneo , Reação em Cadeia da Polimerase/métodos , Água do Mar/microbiologia , Propriedades de Superfície
19.
Macromol Biosci ; 22(11): e2200304, 2022 11.
Artigo em Inglês | MEDLINE | ID: mdl-36153836

RESUMO

This article aims to show the influence of surface characteristics (microtopography, chemistry, mechanical properties) and seawater parameters on the settlement of marine micro- and macroorganisms. Polymers with nine microtopographies, three distinct mechanical properties, and wetting characteristics are immersed for one month into two contrasting coastal sites (Toulon and Kristineberg Center) and seasons (Winter and Summer). Influence of microtopography and chemistry on wetting is assessed through static contact angle and captive air bubble measurements over 3-weeks immersion in artificial seawater. Microscopic analysis, quantitative flow cytometry, metabarcoding based on the ribulose biphosphate carboxylase (rbcL) gene amplification, and sequencing are performed to characterize the settled microorganisms. Quantification of macrofoulers is done by evaluating the surface coverage and the type of organism. It is found that for long static in situ immersion, mechanical properties and non-evolutive wettability have no major influence on both abundance and diversity of biofouling assemblages, regardless of the type of organisms. The apparent contradiction with previous results, based on model organisms, may be due to the huge diversity of marine environments, both in terms of taxa and their size. Evolutive wetting properties with wetting switching back and forth over time have shown to strongly reduce the colonization by macrofoulers.


Assuntos
Incrustação Biológica , Incrustação Biológica/prevenção & controle , Polímeros/química , Molhabilidade , Propriedades de Superfície
20.
Sci Total Environ ; 814: 152278, 2022 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-34902408

RESUMO

The adsorption of trace metals on microplastics (MPs) is affected by the presence of surficial biofilms but their interactions are poorly understood. Here, we present the influence of Cu levels in real seawater (Toulon Bay, NW Mediterranean Sea) on microbial communities and Cu content of the resulting biofilms grown during incubation experiments on high density polyethylene. Two sets of incubation experiments were run with seawater supplied with MPs, sampled in two sites with contrasting Cu levels: Pt12 (most contaminated site) and Pt41P (less contaminated site). For each incubation experiment, 5 treatments were considered differing in Cu concentrations, ranging between 30 and 400 nM and between 6 and 60 nM, for Pt12 and Pt41p, respectively. A control experiment (filtered at 0.2 µm) was run in parallel for each incubation experiment. We observed that, at the time scale of the incubation period, both prokaryotic and eukaryotic richness and diversity were higher in the biofilms formed from the most contaminated site. In addition, we showed that Cu levels are shaping biofilm communities, evidencing co-occurrence patterns between prokaryotes and eukaryotes with diatoms playing a central role. These differences in biofilm formation were reflected in the amount of bioaccumulated Cu per dry weight of MPs, exhibiting higher values in the most contaminated site. Within this site, the increase of Cu seawater content enhanced its bioaccumulation onto MPs until reaching saturation. This study strongly suggests a striking link between seawater copper content, biofilm community shaping and the resulting Cu bioaccumulation onto MPs.


Assuntos
Microbiota , Poluentes Químicos da Água , Bioacumulação , Biofilmes , Cobre/toxicidade , Microplásticos , Plásticos , Água do Mar , Poluentes Químicos da Água/análise
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