In-depth exploration of the high and normal pH beef proteome: First insights emphasizing the dynamic protein changes in Longissimus thoracis muscle from pasture-finished Nellore bulls over different postmortem times.

This study aimed to evaluate for the first time the temporal dynamic changes in early postmortem proteome of normal and high ultimate pH (pHu) beef samples from the same cattle using a shotgun proteomics approach. Ten selected carcasses classified as normal (pHu < 5.8; n = 5) or high (pHu ≥ 6.2; n = 5) pHu beef from pasture-finished Nellore (Bos taurus indicus) bulls were sampled from Longissimus thoracis muscle at 30 min, 9 h and 44 h postmortem for proteome comparison. The temporal proteomics profiling quantified 863 proteins, from which 251 were differentially abundant (DAPs) between high and normal pHu at 30 min (n = 33), 9 h (n = 181) and 44 h (n = 37). Among the myriad interconnected pathways regulating pH decline during postmortem metabolism, this study revealed the pivotal role of energy metabolism, cellular response to stress, oxidoreductase activity and muscle system process pathways throughout the early postmortem. Twenty-three proteins overlap among postmortem times and may be suggested as candidate biomarkers to the dark-cutting condition development. The study further evidenced for the first time the central role of ribosomal proteins and histones in the first minutes after animal bleeding. Moreover, this study revealed the disparity in the mechanisms underpinning the development of dark-cutting beef condition among postmortem times, emphasizing multiple dynamic changes in the muscle proteome. Therefore, this study revealed important insights regarding the temporal dynamic changes that occur in early postmortem of high and normal muscle pHu beef, proposing specific pathways to determine the biological mechanisms behind dark-cutting determination.

Tunnel-Ventilated Sheds with Negative Pressure Reduce Thermal Stress and Improve the Meat Quality of Broilers.

This study aimed to evaluate the thermal performance and meat quality in broilers reared in positive pressure tunnel ventilation (PP) and negative pressure tunnel ventilation (NP) in production houses. 320 Cobb broilers (40 broilers per house) were used. Pectoralis major muscles from 40 broilers (10 broilers per house) were randomly selected and analysed for L* (lightness), a* (redness), b* (yellowness), pH, drip loss (DL), cooking loss (CL) and shear force (SF). Air temperature and humidity of the transportation and slaughterhouse waiting room were recorded in the last week of rearing. Subsequently, the enthalpy comfort index (ECI) was calculated. Air temperature and ECI were higher (p < 0.05) in positive pressure sheds, whereas relative humidity was higher (p < 0.001) in negative pressure sheds. There was no statistically significant difference between the enthalpy comfort index during transport and lairage (p > 0.005). Meat quality defects (high L*, DL, CL, SF) were found in PP and NP. It was observed that b* was higher in PP, although pH and CL were higher in NP. Differences in pH, b* and CL indicate that broilers from PP had a higher level of heat stress. In conclusion, differences in pH, b*value and cooking loss in breast broilers indicate that birds in PP had a higher level of heat stress. Additional studies investigating pre-slaughter handling methods to minimise injuries and heat stress are recommended in order to improve animal welfare and meat quality.

Assessment of beef sensory attributes and physicochemical characteristics: A comparative study of intermediate versus normal ultimate pH striploin cuts.

The quality of beef, defined by key attributes such as the intrinsic sensory qualities texture, flavour, and juiciness, is shaped by various intrinsic and extrinsic factors. This study conducted a detailed examination of Nellore beef, focusing on two categories based on ultimate pH (pHu) levels: intermediate (pHu ≥ 5.8) and normal (pHu < 5.6) beef. A comprehensive approach was taken, involving twenty trained assessors who applied the Optimised Descriptive Profile (ODP) method to evaluate grilled striploin steak samples. In parallel, consumer preferences were measured through a hedonic test and a Check-all-that-apply (CATA) task, involving 135 participants. The ODP results revealed that the intermediate pHu samples were juicier (P < 0.05) compared to the normal pHu group. The CATA analysis highlighted differences in both intermediate and normal pHu beef, especially in juiciness, a crucial factor for consumer satisfaction. Notably, variations in deoxymyoglobin content linked to ageing were observed, with higher levels at the 3rd day compared to the 28th day, especially in the intermediate pHu samples (P < 0.05). Moreover, colour-related aspects such as L*, b*, chroma (C*), and oxymyoglobin were significantly influenced (P < 0.05) by both the pHu category and ageing time. Regarding consumer acceptance, the study found no significant difference in perception between the intermediate and normal pHu groups (P > 0.05). These findings revealed the complex interactions between pHu levels, sensory characteristics, and consumer preferences in beef quality, offering valuable insights for both the industry and research community.

Tumor analysis of MMR genes in Lynch-like syndrome: Challenges associated with results interpretation.

BACKGROUND: Up to 70% of suspected Lynch syndrome patients harboring MMR deficient tumors lack identifiable germline pathogenic variants in MMR genes, being referred to as Lynch-like syndrome (LLS). Previous studies have reported biallelic somatic MMR inactivation in a variable range of LLS-associated tumors. Moreover, translating tumor testing results into patient management remains controversial. Our aim is to assess the challenges associated with the implementation of tumoral MMR gene testing in routine workflows. METHODS: Here, we present the clinical characterization of 229 LLS patients. MMR gene testing was performed in 39 available tumors, and results were analyzed using two variant allele frequency (VAF) thresholds (≥5% and ≥10%). RESULTS AND DISCUSSION: More biallelic somatic events were identified at VAF ≥ 5% than ≥10% (35.9% vs. 25.6%), although the rate of nonconcordant results regarding immunohistochemical pattern increased (30.8% vs. 20.5%). Interpretation difficulties question the current utility of the identification of MMR somatic hits in the diagnostic algorithm of suspected LS cases.

Impact of Micronized Salt in Reducing the Sodium Content in Fresh Sausages.

This study aimed to investigate the incorporation of micronized salt (MS) to reduce sodium content in fresh sausages while preserving technological, chemical, textural, and sensory characteristics. Four treatments were prepared: control (C) with 2.0% regular salt; M2.0% with 2.0% micronized salt; M1.5% with 1.5% micronized salt; and M1.0% with 1.0% micronized salt, containing 1004, 1133, 860, and 525 mg of sodium/100 g of product, respectively. To characterize the samples, analyses of sodium content, cooking loss, relative myoglobin content, and instrumental color were carried out. The sensory analysis was performed using the Temporal-Check-All-That-Apply (TCATA) method. Half of the micronized salt treatment was mixed with the fat during the processing of the fresh sausages. It was possible to achieve a 50% reduction in sodium (M1.0%) in the fresh sausages without negative effects on most technological, chemical, and textural parameters, which did not differ from the control treatment (C). Conversely, "chewiness" decreased in M2.0% compared to the control (C) due to mixing micronized salt with the fat. The sodium reduction did not impact the temporal sensory profile and overall liking. Therefore, using micronized salt in fresh sausages reduces sodium content without affecting sensory traits and product stability.

The effect of succinate on color stability of Bos indicus bull meat: pH-dependent effects during the 14-day aging period.

Bos taurus indicus bulls are very susceptible to pre-slaughter stress, which directly impacts the decline in muscle pH, leading to darker meat. The aim was to investigate the effect of succinate and atmosphere on the color stability of Nellore (Bos taurus indicus) Longissimus lumborum steaks classified by ultimate pH (pHu): normal pHu (5.40 ≤ pHu ≤ 5.79) and high pHu (pHu ≥ 5.80). The experimental treatment systems were: (i) vacuum packaging without succinate injection, (ii) HiOx-MAP (80 % O2 + 20 % CO2), and (iii) HiOx-MAP (80 % O2 + 20 % CO2) enhanced with sodium succinate injection (pH 5.4). Steaks from all treatment systems were stored at 4 °C for 14 days and tested for instrumental color, myoglobin content, oxygen consumption (OC), metmyoglobin-reducing activity (MRA), lipid oxidation, and microbiological analysis. High and normal pHu vacuum-packaged steaks exhibited greater color stability due to higher MRA. High and normal pHu steaks packaged with HiOx-MAP or HiOx-MAP enhanced with succinate showed improved color due to lower deoxymyoglobin content (%DMb) and OC up to the eighth day of storage. Still, succinate injection promoted increased (P < 0.05) lipid oxidation in normal pHu steaks and reduced MRA after 14 days. These findings emphasize the intricate interplay between pHu and packaging systems on Bos taurus indicus meat quality. Further research in this area could contribute to a better understanding of meat color abnormalities and provide insights into potential meat preservation and enhancement strategies.

Lipidome and metabolome profiling of longissimus lumborum beef with different ultimate pH and postmortem aging.

The objective of this exploratory study was to assess the changes on lipidome and metabolome profiling of Longissimus lumborum bull muscle with different ultimate pH (pHu) and aging periods. The bull muscles classified as normal, intermediate, or high pHu were collected from a Brazilian commercial slaughterhouse, cut into steaks, individually vacuum-packaged, and aged for 3 days (3-d) or 21 days (21-d) at 2 °C. Muscle extracts were analyzed for the profiles of both lipids, by mass spectrometry (via direct flow-injection), and metabolites, by nuclear magnetic resonance, with downstream multivariate data analysis. As major results, pairwise comparisons identified C12:0 and C14:0 acylcarnitines as potential biomarkers of the intermediate pHu-muscle, which are related to lipid catabolism for alternative energy metabolism and indicate less protein breakage postmortem. Interestingly, the concentration of arginine at early postmortem aging (3-d) may influence the previously reported improved tenderness in normal and high pHu-muscles. Moreover, upregulation of fumarate, formate, and acetate with increased pHu muscle at 21-d aging indicate more intense tricarboxylic acid cycle, amino acid degradation, and pyruvate oxidation by reactive oxygen species, respectively. These three compounds (fumarate, formate, and acetate) discriminated statistically the muscle with high pHu at 21-d aging. The normal pHu-muscle showed higher concentrations of glycogenolysis and glycolysis metabolites, including glucose, mannose, and pyruvate. Hence, our results enhance knowledge of postmortem biochemical changes of beef within different pHu groups aged up to 21 days, which is essential to understand the mechanisms underpinning bull meat quality changes.

Risk factors for colonization with extended-spectrum cephalosporin-resistant and carbapenem-resistant Enterobacterales among hospitalized patients in Guatemala: An Antibiotic Resistance in Communities and Hospitals (ARCH) study.

Objectives: The spread of extended-spectrum cephalosporin-resistant Enterobacterales (ESCrE) and carbapenem-resistant Enterobacterales (CRE) has resulted in increased morbidity, mortality, and health care costs worldwide. To identify the factors associated with ESCrE and CRE colonization within hospitals, we enrolled hospitalized patients at a regional hospital located in Guatemala. Methods: Stool samples were collected from randomly selected patients using a cross-sectional study design (March-September, 2021), and samples were tested for the presence of ESCrE and CRE. Hospital-based and household variables were examined for associations with ESCrE and CRE colonization using lasso regression models, clustered by ward (n = 21). Results: A total of 641 patients were enrolled, of whom complete data sets were available for 593. Colonization with ESCrE (72.3%, n = 429/593) was negatively associated with carbapenem administration (odds ratio [OR] 0.21, 95% confidence interval [CI] 0.11-0.42) and positively associated with ceftriaxone administration (OR 1.61, 95% CI 1.02-2.53), as was reported hospital admission within 30 days of the current hospitalization (OR 2.84, 95% CI 1.19-6.80). Colonization with CRE (34.6%, n = 205 of 593) was associated with carbapenem administration (OR 2.62, 95% CI 1.39-4.97), reported previous hospital admission within 30 days of current hospitalization (OR 2.58, 95% CI 1.17-5.72), hospitalization in wards with more patients (OR 1.05, 95% CI 1.02-1.08), hospitalization for ≥4 days (OR 3.07, 95% CI 1.72-5.46), and intubation (OR 2.51, 95% CI 1.13-5.59). No household-based variables were associated with ESCrE or CRE colonization in hospitalized patients. Conclusion: The hospital-based risk factors identified in this study are similar to what has been reported for risk of health care-associated infections, consistent with colonization being driven by hospital settings rather than community factors. This also suggests that colonization with ESCrE and CRE could be a useful metric to evaluate the efficacy of infection and prevention control programs in clinics and hospitals.

Large-scale genome-wide association study of 398,238 women unveils seven novel loci associated with high-grade serous epithelial ovarian cancer risk.

Background: Nineteen genomic regions have been associated with high-grade serous ovarian cancer (HGSOC). We used data from the Ovarian Cancer Association Consortium (OCAC), Consortium of Investigators of Modifiers of BRCA1/BRCA2 (CIMBA), UK Biobank (UKBB), and FinnGen to identify novel HGSOC susceptibility loci and develop polygenic scores (PGS). Methods: We analyzed >22 million variants for 398,238 women. Associations were assessed separately by consortium and meta-analysed. OCAC and CIMBA data were used to develop PGS which were trained on FinnGen data and validated in UKBB and BioBank Japan. Results: Eight novel variants were associated with HGSOC risk. An interesting discovery biologically was finding that TP53 3'-UTR SNP rs78378222 was associated with HGSOC (per T allele relative risk (RR)=1.44, 95%CI:1.28-1.62, P=1.76×10-9). The optimal PGS included 64,518 variants and was associated with an odds ratio of 1.46 (95%CI:1.37-1.54) per standard deviation in the UKBB validation (AUROC curve=0.61, 95%CI:0.59-0.62). Conclusions: This study represents the largest GWAS for HGSOC to date. The results highlight that improvements in imputation reference panels and increased sample sizes can identify HGSOC associated variants that previously went undetected, resulting in improved PGS. The use of updated PGS in cancer risk prediction algorithms will then improve personalized risk prediction for HGSOC.

Esquema de manejo de COVID-19 en adultos / COVID-19 treatment guidelines in adults

RESUMEN Un nuevo coronavirus, denominado COVID-19, fue descubierto por el brote iniciado en China a finales de diciembre del año 2019. Los síntomas característicos son fiebre, tos seca, dificultad respiratoria y malestar general. Muchas investigaciones se están llevando a cabo ya que, si bien no es una enfermedad considerada mortal, tiene un índice de contagio muy alto. Sin embargo, junto a los cuidados hospitalarios y extrahospitalarios, existe un grupo de fármacos que se vienen utilizando para combatir esta enfermedad, tales como hidroxicloroquina, cloroquina, remdesivir, lopinavir/ritonavir, tocilizumab, interferón beta 1B, entre otros.

ABSTRACT A novel coronavirus disease called COVID-19 was discovered as a result of the outbreak that began in China at the end of December 2019. Common symptoms are fever, dry cough, shortness of breath and malaise. Several research are being conducted since the disease has high transmission rate even though it is not considered life-threatening. However, together with hospital and out-of-hospital care, there is a group of medications being used to fight this disease, such as hydroxychloroquine, chloroquine, remdesivir, lopinavir/ritonavir, tocilizumab, interferon beta-1b, among others.

Amputación de Syme en paciente con pie de Madura / Syme's amputation in patient with Madura Foot

RESUMEN Fundamento: el micetoma es una enfermedad infecciosa crónica y progresiva que compromete la piel, partes blandas y el hueso, es causada por bacterias y hongos. Por su clínica se manifiesta como nódulos que se agrupan y forman placas con trayectos fistulosos que drenan material purulento o sero-sanguinolento con gránulos característicos. Afecta con mayor frecuencia a los miembros inferiores. Objetivo: presentar el caso de un paciente con pie de Madura, tratado con amputación de Syme. Presentación del caso: paciente de 42 años de edad, del sexo masculino, raza negra, VIH positivo, con antecedentes de lesión crónica de la piel, partes blandas y huesos metatarsianos del pie izquierdo de más de ocho años de evolución. Se le realizaron estudios de laboratorio, radiológicos e histopatológico que condujeron al diagnóstico de micetoma por Madurella grisea. Debido a los malos resultados obtenidos con las cirugías óseas y antifúngicos utilizados se decidió realizar, como tratamiento definitivo, la amputación de Syme. Conclusiones: esta enfermedad es poco frecuente en nuestro medio, se encuentra distribuida en todo el mundo la misma debe considerarse dentro del diagnóstico diferencial de toda lesión supurativa, de evolución crónica en las extremidades inferiores. En el micetoma del pie los mejores resultados se obtienen con técnicas de amputación de la zona afectada como el proceder de Syme, el cual reduce al mínimo las secuelas anatómicas, funcionales y psicoemocionales del paciente.

ABSTRACT Background: mycetoma is a chronic and progressive inflammatory disease affecting the skin, soft tissues and bones; it is caused by bacteria and fungi. Clinically it manifests itself as nodules that tend to coalesce and form plaques with fistulous paths, which drain purulent or serosanguineous material with characteristic grains. Lower limbs are most affected. Objetive: to show a patient with Madura foot, treated by Syme's amputation. Case report: a 42 years-old, black, male, HIV positive patient, with history of chronic lesions of the skin, soft tissues and metatarsals bones of the left foot, with more than eight years of evolution. Laboratory studies, radiological assessment and hysto-pathological examination were done and finally, mycetoma's diagnosis by Madurella grisea was confirmed. According to the poor results obtained with other bone surgery and antifungal treatments; Syme's amputation, as definitive management was performed. Conclusions: this disease though rare in our environment, has worldwide prevalence; it should be considered within the differential diagnosis when chronic suppurative lesions are present in the lower limbs. In Madura foot, the best results are obtained with the amputation technique of the affected zone, such as the Syme's procedure, which one minimizes the anatomical, functional and psycho-emotional sequel of the patient.

Utility of anti-C1q and anti-nucleosome antibodies in systemic lupus erythematosus and lupus nephritis in southwestern Colombia / Utilidad de los anticuerpos anti-C1q y anti-nucleosomas en el lupus eritematoso sistémico y la nefritis lúpica en el suroccidente colombiano

ABSTRACT Introduction: Lupus nephritis (LN) is one of the most prevalent and severe complications of systemic lupus erythematosus (SLE), requiring reliable urine and serum biomarkers to evaluate it. Anti-nucleosome and anti-C1q antibodies are associated with LN in several geographic regions. Also, southwest Colombia has a heterogeneous ethnicity, which motivated the evaluation of the frequency and relationship of such markers with LN in this region. Methods: A cross-sectional study was conducted in a health centre in south-west Colombia in 84 patients diagnosed with SLE (57 without LN; 27 with LN) between 2016 and 2018. Demographic and clinical and laboratory features, including anti-dsDNA, complement, and anti-C1q and anti-nucleosome antibodies were compared in these patients. ELISA immunoassays were performed to measure the antibodies of interest in blood samples. Statistical analysis was carried out using STATA14 software (StataCorp, College Station, Texas, USA). Quantitative variables were summarised as means or medians and compared with Mann-Whitney or Two-sample t test. Categorical variables were shown as proportions, and compared with Chi-squared or Fisher's exact test. Correlation analysis between quantitative variables was calculated using Spearman's correlation. Results: Of all 84 patients, 27 patients had LN, of which 16 (59.2%) had a positive test for anti-nucleosome antibodies and 10 (37%) for anti-C1q antibodies. An association was found between anti-C1q and proliferative forms of LN and newly diagnosed LN. A correlation was found between anti-nucleosome and anti-C1q antibodies, and anti-dsDNA and low serum complement concentrations. Conclusion: Although both markers were found in variable percentages in SLE patients and seem not to be specific markers of LN in our population, anti-C1q was associated with proliferative forms of LN and de novo LN.

RESUMEN Introducción: La nefritis lúpica (NL), una de las complicaciones más frecuentes y graves del lupus eritematoso sistémico (LES), requiere biomarcadores confiables de orina y suero para su evaluación. Los anticuerpos anti-nucleosoma y anti-C1q se asocian con la NL en varias regiones geográficas. En el suroccidente colombiano se asienta una etnia heterogénea, lo que motivó la evaluación de la frecuencia y la relación de dichos marcadores con NL en dicha región. Métodos: Realizamos un estudio transversal en un centro de salud en el suroccidente de Colombia, con 84 pacientes diagnosticados con LES (57 sin NL; 27 con NL) entre los anos 2016 y 2018. Se compararon las características demográficas, clínicas y de laboratorio, incluidos los anticuerpos anti-dsDNA, complemento, anti-C1q y anti-nucleosomas entre estos pacientes. Se realizaron inmunoensayos ELISA para medir los anticuerpos de interés en muestras de sangre. El análisis estadístico se llevó a cabo con el software Stata v.14 (Stata-Corp, College Station, Texas, EE. UU.). Las variables cuantitativas se resumieron como medias o medianas y se compararon con la prueba t de Mann-Whitney o Two-sample t test; las variables categóricas se mostraron como proporciones y se compararon con Chi-cuadrado o con la prueba exacta de Fisher. Para el análisis de correlaciones entre variables cuantitativas se calculó el coeficiente de correlación de Spearman. Resultados: Entre los 84 pacientes, 27 presentaban LN, de los cuales 16 (59,2%) tuvieron una prueba positiva para anticuerpos anti-nucleosoma y 10 (37%) para anticuerpos anti-C1q. Se encontró una asociación entre anti-C1q y formas proliferativas de NL, así como formas recientemente diagnosticadas de NL. Hubo una correlación entre los anticuerpos anti-nucleosoma y anti-C1q y el anti-dsDNA y las bajas concentraciones de complemento sérico. Conclusión: Aunque los 2 marcadores se encontraron en porcentajes variables de pacientes con LES y no parecen ser marcadores específicos de NL en nuestra población, la presencia de anti-C1q se asoció con formas proliferativas de NL y NL de novo.

Using evidence-informed policies to tackle overweight and obesity in Chile

Overweight and obesity are a global epidemic with rates having risen to alarming levels in both developed and developing countries. Chile has been no exemption, with sharp increases in obesity prevalence, especially among school-age children. This paper describes the policy actions and strategies implemented to tackle this major public health concern in Chile over the last 10 years, and highlights the main challenges and nuances of the process. Chile has taken policy action that includes front-of-package labelling, advertising regulations, and school-food restrictions. New policies focus on the social determinants of health as they relate to food environments and people's behavior. These actions are not only suitable to the current context in Chile, but are also supported by the best available scientific evidence. Moreover, the implementation of these policies has produced a broad debate involving public institutions and the food industry, with discussions issues ranging from property rights to trade barriers. Despite some differences among stakeholders, a valuable political consensus has been achieved, and several international organizations are eager to evaluate the impact of these pioneer initiatives in Latin America.

Actividad antifúngica del aceite esencial de naranja (Citrus sinensis L.) sobre hongos postcosecha en frutos de lechosa (Carica papaya L.) / Anti-fungal activity of essential orange oil (Citrus sinensis L.) over post-harvest fungi in papaya fruits (Carica papaya L.)

Los hongos postcosecha causan pudriciones que afectan la calidad de los frutos de lechosa (Carica papaya L.). Actualmente los aceites esenciales son considerados una alternativa a los fungicidas químicos para controlar estos hongos. En este estudio se evaluó la actividad antifúngica del aceite esencial de naranja (Citrus sinensis L.) sobre los hongos Colletotrichum gloeosporioides, Penicillium indicum, Fusarium solani, Rhizopus stolonifer y Aspergillus flavus, en medio de cultivo Papa Dextrosa Agar (PDA) en un diseño completamente al azar. Los resultados mostraron que existe un efecto inhibidor del aceite esencial de naranja (AEN) en el crecimiento micelial de los hongos in vitro, superior al 80% a concentración de AE de 1%, y 100% de inhibición a concentraciones de 2,5% y 5% de AE (p<0,05). Al ser utilizado como recubrimiento de los frutos, a concentraciones de 2,5% y 5%, disminuye la presencia de lesiones en los mismos, sin diferencias significativas (p<0,05), con igual comportamiento en efectividad in vitro e in vivo. El AEN puede ser una alternativa factible, para el control natural y eficaz de hongos postcosecha, causantes de grandes pérdidas en frutas para exportación y consumo.

Post-harvest fungi produce rotting that affects the quality of papaya fruits (Carica papaya L.) At present, essential oils are considered an alternative to chemical anti-fungal substances for controlling these fungi. In this study we evaluated the antifungal activity of essential orange oil (Citrus sinensis L.) over Colletotrichum gloeosporioides, Penicillum indicum, Fusarium solani, Rhizopus stolonifer and Aspergillus flavus, in Potato Dextrose Agar (PDA) culture medium in a completely random design. The results showed that there is an inhibitory effect of essential orange oil (EOO) over the in vitro mycelium growth of fungi, higher than 80% at a 1% EOO concentration and 100% inhibition at 2.5% and 5% EOO concentrations (p<0.05). When used as covering over the fruits at 2.5% and 5% concentrations, it decreased the presence of lesions without significant differences (p<0.05), with similar effectiveness in vitro and in vivo. EOO can be a feasible alternative for the natural and effective control of post-harvest fungi, which cause great losses in exportation and consumption fruits.

Evaluación in vitro de aislamientos de Trichoderma harzianum para el control de Rhizoctonia solani, Sclerotium rolfsii y Fusarium oxysporum en plantas de tomate / In vitro evaluation of Trichoderma harzianum for control of Rhizoctonia solani, Sclerotium rolfsii, and Fusarium oxysporum in tomato plants

En este estudio se determinó la capacidad antagónica de aislamientos de T. harzianum para el control de Rhizoctonia solani, Sclerotium rolfsii y Fusarium oxysporum en raíces de plantas de tomate. Se obtuvieron 6 aislamientos de T. harzianum de 6 municipios del estado Trujillo, empleando la técnica de siembra directa de raíces en agar agua acidificada. El antagonismo se realizó en cultivos duales utilizando agar papa dextrosa, incubados a 25 ºC, bajo un diseño al azar, con 18 tratamientos conformados por cada aislamiento de T. harzianum y cada patógeno, 3 tratamientos testigos correspondientes a cada patógeno y 3 repeticiones por tratamiento, evaluándose el modo de acción e inhibición del crecimiento radial al tercer día. Todos los aislamientos de T. harzianum mostraron un rápido crecimiento sin diferencias significativas entre ellos (p>0,05), aún cuando se observó que el T121 fue más eficaz como controlador. Al comparar el crecimiento de los aislamientos de T. harzianum con el de los hongos patógenos, se obtuvieron diferencias significativas (p<0,05). Cuatro aislamientos de T. harzianum presentaron acción micoparasítica y dos de tipo antibiosis, mecanismos característicos de estas especies de biocontroladores. Todos los aislamientos de T. harzianum estudiados pueden ser utilizados para el control de patógenos de tomate.

This study determined the antagonistic capacity of T. harzianum isolates for control of Rhizoctonia solani, Sclerotium rolfsii, and Fusarium oxysporum in the roots of tomato plants. Six T. harzianum isolates were obtained from 6 municipalities of Trujillo State, using the direct inoculation of roots in acidified water agar technique. The antagonism was carried out in dual cultures using potato dextrose agar, incubated at 25 ºC, under a random design, with 18 treatments conformed for each T. harzianum isolate and each pathogen, 3 control treatments corresponding to each pathogen, and 3 repetitions per treatment, evaluating the mode of action and inhibition of radial growth at the third day. All the T. harzianum isolates showed rapid growth without significant differences among them (p>0.05), even though it was observed that T121 was more efficient as controller. When comparing the growth of the T. harzianum isolates with that of the pathogenic fungi, there were significant differences (p<0.05). Four T. harzianum isolates showed mycoparasitic action, and two antibiosis type action, which are characteristic mechanisms of these bio-controlling species. All the T. harzianum isolates studied can be used for the control of tomato pathogens.

Caracterización epidemiológica y clínica de la infección por influenza A (H1N1) 2009 en San Felipe, Región de Valparaíso, Chile: Junio a agosto 2009 / Epidemiological and clinical characteristics of influenza A (H1N1) 2009 at San Felipe, Valparaiso Region, Chile: June-August 2009

In order to understand the clinical and epidemiological aspects of infection with the AH1N1 influenza virus in Chile, a prospective study in the city of San Felipe was undertaken. It analyses the trends in consultations for respiratory causes in three primary care centers and hospital discharges by comparing data from years 2008 and 2009 until epidemiological week 37.It also includes a study of cases of ILI / SARI (influenza like disease/severe acute respiratory disease) in which viruses were detected by direct immunofluorescence (DIF) of nasopharyngeal aspirates and by real-time polymerase chain reaction in the case of influenza A (H1N1) 2009. A household survey was conducted in those cases with confirmed A (H1N1) infection, to identify contacts and history related to influenza virus transmission. The results indicate that the behavior of the pandemic was similar to that observed in the rest of the country, with an increase in emergency room visits for ILI. The most affected age group was from 5 to 14 years (26.5 per thousand inhabitants) and the least affected 60 years or older (1.2 per thousand). A 2.78% of the cases corresponded to SARI and the fatality rate was 0.11%.

Con el objetivo de conocer los aspectos clínicos y epidemiológicos de la infección por el virus A (H1N1) en Chile, se realizó un estudio prospectivo en la ciudad de San Felipe, lugar donde el brote de influenza se inició tardíamente en relación a otras ciudades del país. Se analizó la tendencia en las consultas por causa respiratorias en tres centros de atención primaria y egresos hospitalarios comparando los años 2008 y 2009 hasta la semana epidemiológica 37, y se realizó un estudio prospectivo de casos de enfermedad tipo influenza/infección respiratoria aguda grave (ETI/IRAG), tomando muestras mediante aspirado nasofaríngeo para detección de virus respiratorios por in-munofluorescencia directa (IFD) e identificación de virus influenza A (H1N1) 2009 por reacción de polimerasa en cadena en tiempo real (RPC-TR). En los pacientes confirmados se hizo una encuesta en visita domiciliaria para identificación de contactos y antecedentes relacionados con la transmisión de la influenza. Los resultados indican que el comportamiento de la pandemia fue similar a lo observado en el resto del país, con aumento de consulta principalmente en los servicios de urgencia; el grupo de edad más afectado fue el de 5 a 14 años (26,5 por mil habitantes), el menos afectado el grupo mayor de 60 años (1,2 por mil habitantes). Un 2,78% de los casos correspondió a IRAG y la tasa de letalidad fue de 0,11%.

Microbial deterioration of vacuum-packaged chilled beef cuts and techniques for microbiota detection and characterization: a review

Gas production from microbial deterioration in vacuum-packs of chilled meat leads to pack distension, which is commonly referred as blown pack. This phenomenon is attributed to some psychrophilic and psychrotrophic Clostridium species, as well as Enterobacteria. The ability of these microorganisms to grow at refrigeration temperatures makes the control by the meat industry a challenge. This type of deterioration has been reported in many countries including some plants in the Midwestern and Southeastern regions of Brazil. In addition to causing economic losses, spoilage negatively impacts the commercial product brand, thereby impairing the meat industry. In the case of strict anaerobes species they are difficult to grow and isolate using culture methods in conventional microbiology laboratories. Furthermore, conventional culture methods are sometimes not capable of distinguishing species or genera. DNA-based molecular methods are alternative strategies for detecting viable and non-cultivable microorganisms and strict anaerobic microorganisms that are difficult to cultivate. Here, we review the microorganisms and mechanisms involved in the deterioration of vacuum-packaged chilled meat and address the use of molecular methods for detecting specific strict anaerobic microorganisms and microbial communities in meat samples.

Alternativas para el control de hongos postcosecha en naranjas valencia (Citrus sinensis) / Alternatives for postharvest fungi control of valencia oranges (Citrus sinensis)

La finalidad de este estudio fue conocer la efectividad del hongo Trichoderma harzianum, el quitosano y el bicarbonato de sodio en el control de hongos postcosecha en naranjas valencia. Se utilizaron 120 naranjas valencia, usando 24 naranjas por grupo. Cada uno de estos grupos fue sumergido en uno de los siguientes tratamientos: cultivo del hongo T. harzianum (1x10(9) esporas/mL.), quitosano (2%), bicarbonato de sodio (1%) y agua común (testigo); las 24 naranjas restantes no recibieron tratamiento y fueron consideradas como grupo control. Las naranjas fueron posteriormente almacenadas en envases de plástico con papel absorbente durante 14 días, a 27ºC, para determinar el crecimiento de hongos u otra alteración. Se desarrollaron 4 especies de hongos en el grupo control: Penicillium digitatum (80%), Penicillium italicum (10%), Colletotrichum gloeosporioides (5%) y Cladosporium herbarum (5%), con diferencias significativas entre hongos (p<0,05). En el testigo, sólo se encontró P. digitatum en un 29,1% y en los tratamientos con quitosano y bicarbonato de sodio sólo se presentaron pudriciones no fúngicas en un 20,8% y 41,6% respectivamente. Las tratadas con T. harzianum no presentaron hongos, ni ninguna alteración en 14 días de tratamiento, existiendo diferencias significativas (p<0,05) en cuanto a la presencia de hongo o alteración por tratamiento. Esto sugiere que es posible controlar hongos postcosecha de las naranjas con el hongo T. harzianum.

The purpose of this study was to establish the effectiveness of the fungus Trichoderma harzianum, chitosane and sodium bicarbonate for postharvest fungus control of valencia oranges. We used 120 valencia oranges using 24 oranges per group. Each of the groups was immersed in one of the following treatments: T. harzianum cultures (1x10(9) spores/mL), chitosane (2%), sodium bicarbonate (1%) and running water (witness); the remaining 24 oranges did not receive any treatment, and were considered as the control group. The oranges were later stored in plastic containers with absorbent paper during 14 days at 27ºC to determine fungus growth or any other alteration. Four fungi species developed in the control group: Penicillium digitatum (80%), Penicillium italicum (10%), Colletotrichum gloeosporioides (5%) and Cladosporium herbarum (5%) with significant differences among fungi (p<0.05). In the witness group there was only P. digitatum (29.1%), and in the groups treated with chitosane and sodium bicarbonate there was only non-fungal rotting in 20.8% and 41.6%, respectively. The oranges treated with T. harzianum did not present fungi or any other alteration during the 14 treatment days, and there were significant differences (p<0.05) as to presence of fungi or alterations during treatment. This suggests that it is possible to perform a post harvest control of oranges with the T. harzianum fungus.

Efecto antagónico de Trichoderma harzianum sobre algunos hongos patógenos postcosecha de la fresa (Fragaria spp) / Antagonist effect of Trichoderma harzianum over some strawberry (Fragaria spp) post harvesting fungi pathogens

La podredumbre blanda (Rhyzopus stolonifer), la podredumbre negra (Mucor spp., Aspergillus niger y Pythium spp.) son las enfermedades postcosecha más comunes de la fresa (Fragaria spp.) y generan grandes pérdidas de estas. Durante muchos años se han utilizado fungicidas sintéticos para controlar a estos patógenos, pero se ha demostrado que se hacen resistentes a dichos productos, además de representar un riesgo potencial al ambiente y la salud humana. Todo esto ha conllevado a la búsqueda de alternativas naturales como el empleo de extractos vegetales y antagonistas microbianos, siendo Trichoderma harzianum el antagonista mas utilizado como control biológico. El objetivo de este estudio fue determinar el efecto antagónico de T. harzianum sobre algunos hongos patógenos postcosecha en fresa y conocer su mecanismo de acción. Las muestras de fresa fueron transportadas al laboratorio en los mismos empaques de venta, y posteriormente las fresas fueron colocadas en cámaras de germinación controlando la humedad para el desarrollo rápido de hongos presentes en la fruta. Se identificaron los hongos Rhyzopus stolonifer, Mucor spp., Penicillium digitatum, Rhizoctonia solani, Aspergillus niger y Pythium spp., sobre los cuales se realizó la prueba de antagonismo usando al hongo T. harzianum. La velocidad de crecimiento del biocontrolador fue mayor que el crecimiento de los hongos postcosecha (p<0,01) y a las 96 horas de incubación la caja de Petri estaba completamente cubierta y en la zona de encuentro entre éstos se observó que el mecanismo de acción del biocontrolador fue de tipo micoparasítico. T. harzianum resultó ser un excelente controlador in vitro de hongos postcosecha de frutos de fresa.

Soft rotting (Rhyzopus stolonifer) and black rotting (Mucor spp., Aspergillus niger and Pythium spp.) are the most common post harvesting strawberry (Fragaria spp.) diseases, generating great losses. During many years synthetic fungicides have been used to control these pathogens, but their development of resistance to these products has been demonstrated, following to the fact that they represent a potential environmental and human health risk. This has lead to the search of natural alternatives such as the use of vegetal extracts and microbial antagonists, being Trichoderma harzianum the antagonist most widely used as biological control. The purpose of this study was to determine the antagonist effect of T. harzianum over some post strawberry harvesting pathogens and determine their mechanism of action. The strawberry samples were transported to the laboratory in the same packages in which they were sold, and then were placed in germination chambers, controlling humidity to obtain a rapid development of the fungi present in the fruit. We identified the following fungi:  Rhyzopus stolonifer, Mucor spp., Penicillium digitatum, Rhizoctonia solani, Aspergillus niger and Phytium spp., which were tested for antagonism, using the T. harzianum. The growth speed of the biocontroller was greater than that of the post harvest fungi (p<0,01) and at 96 hours of incubation the Petri dish was completely covered, and the encounter area between them showed that the action mechanism of the biocontroller was of the mycoparasitic type. T. harzianum turned out to be an excellent in vitro controller of post strawberry harvest fungi.