RESUMO
The decline in wild-caught fisheries paired with increasing global seafood demand is pushing the need for seafood sustainability to the forefront of national and regional priorities. Validation of species identity is a crucial early step, yet conventional monitoring and surveillance tools are limited in their effectiveness because they are extremely time-consuming and require expertise in fish identification. DNA barcoding methods are a versatile tool for the genetic monitoring of wildlife products; however, they are also limited by requiring individual tissue samples from target specimens which may not always be possible given the speed and scale of seafood operations. To circumvent the need to individually sample organisms, we pilot an approach that uses forensic environmental DNA (eDNA) metabarcoding to profile fish species composition from the meltwater in fish holds on industrial and artisanal fishing vessels in Ecuador. Fish identified genetically as present were compared to target species reported by each vessel's crew. Additionally, we contrasted the geographic range of identified species against the satellite-based fishing route data of industrial vessels to determine if identified species could be reasonably expected in the catch.
RESUMO
The respiratory syncytial virus (RSV) RNA polymerase, constituted of a 250 kDa large (L) protein and tetrameric phosphoprotein (P), catalyzes three distinct enzymatic activities - nucleotide polymerization, cap addition, and cap methylation. How RSV L and P coordinate these activities is poorly understood. Here, we present a 3.67 Å cryo-EM structure of the RSV polymerase (L:P) complex. The structure reveals that the RNA dependent RNA polymerase (RdRp) and capping (Cap) domains of L interact with the oligomerization domain (POD) and C-terminal domain (PCTD) of a tetramer of P. The density of the methyltransferase (MT) domain of L and the N-terminal domain of P (PNTD) is missing. Further analysis and comparison with other RNA polymerases at different stages suggest the structure we obtained is likely to be at an elongation-compatible stage. Together, these data provide enriched insights into the interrelationship, the inhibitors, and the evolutionary implications of the RSV polymerase.
Assuntos
Microscopia Crioeletrônica , RNA Polimerases Dirigidas por DNA/química , RNA Polimerase Dependente de RNA/química , Vírus Sincicial Respiratório Humano/enzimologia , Proteínas Virais/química , RNA Polimerases Dirigidas por DNA/genética , RNA Polimerases Dirigidas por DNA/metabolismo , Modelos Moleculares , Fosfoproteínas/química , Conformação Proteica , Domínios Proteicos , RNA Polimerase Dependente de RNA/genética , RNA Polimerase Dependente de RNA/metabolismo , Infecções por Vírus Respiratório Sincicial/virologia , Vírus Sincicial Respiratório Humano/genética , Estruturas ViraisRESUMO
Resumen Antecedentes: la palma de mil pesos (Oenocarpus bataua) es una especie promisoria, tanto por sus frutos ricos en aceite de excelente condición como por su especial adaptación a suelos pobres. Objetivo: analizar el perfil de ácidos grasos y propiedades fisicoquímicas del aceite de palma de mil pesos. Materiales y métodos: se analizaron las propiedades fisicoquímicas, el porcentaje de saturación con técnicas del AOAC y el perfil de ácidos grasos mediante cromatografía líquida de gases con detector de ionización de llama (CG-FID). Resultados: el aceite analizado tiene un perfil de ácidos grasos parecido al del aceite de oliva, con la siguiente distribución porcentual de ácidos grasos: palmítico (11,9±1,1), oleico (76,1±1), linoleico (3±0,4), α-linolénico (1,9±0,3), con predominio de grasas monoinsaturadas (77,0±1,0 %), moderado aporte de saturadas (18,1±1,2 %) y bajo de poliinsaturadas (4,9±0,6 %), esto último sería la única limitante para utilizarlo como única fuente de grasa para la preparación de alimentos, por lo demás cumple con la norma colombiana para el aceite de palma alto oleico en cuanto al perfil de ácidos grasos y sus características físicoquímicas. Conclusiones: el aceite estudiado es potencialmente comercializable para el consumo humano y tiene beneficios para la salud cardiovascular de los consumidores.
Abstract Background: The thousand peso palm tree (Oenocarpus bataua) is a promising species, both for its oil-rich fruits of excellent properties and for its unique adaptation to poor soils. Objective: Analyze the fatty acid profile and physicochemical properties of oil from the thousand peso palm tree. Materials and Methods: The physicochemical properties and the percentage of saturation ere found using AOAC techniques, and the fatty acid profile was analyzed by liquid gas chromatography with flame ionization detector (GC-FID). Results: The oil analyzed had a fatty acid profile similar to olive oil, with the following percentage distribution of fatty acids: palmitic (11.9±1.1), oleic (76.1±1), linoleic (3±0.4), α-linolenic (1.9±0.3), with a predominance of monounsaturated fats (77.0±1.0%), moderate contribution of saturated (18.1±1.2%) and low polyunsaturated (4.9±0.6%). Only the polyunsaturated profile would constitute a limitation for use as a sole source of fat for food preparation, otherwise thousand peso palm oil complies with the Colombian standard for high oleic palm oil in terms of the fatty acid profile and its physicochemical characteristics. Conclusions: The oil studied is potentially marketable for human consumption and has cardiovascular health benefits for consumers.