Detalhe da pesquisa
1.
Robust analysis of prokaryotic pangenome gene gain and loss rates with Panstripe.
Genome Res
; 33(1): 129-140, 2023 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-36669850
2.
Fast and flexible bacterial genomic epidemiology with PopPUNK.
Genome Res
; 29(2): 304-316, 2019 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-30679308
3.
Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data.
Clin Infect Dis
; 70(7): 1294-1303, 2020 03 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-31094423
4.
A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa.
J Antimicrob Chemother
; 75(3): 512-520, 2020 03 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31789384
5.
Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci.
PLoS Pathog
; 14(11): e1007438, 2018 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-30475919
6.
Invasive Disease Caused Simultaneously by Dual Serotypes of Streptococcus pneumoniae.
J Clin Microbiol
; 56(1)2018 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29118167
7.
Global Distribution of Invasive Serotype 35D Streptococcus pneumoniae Isolates following Introduction of 13-Valent Pneumococcal Conjugate Vaccine.
J Clin Microbiol
; 56(7)2018 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-29720431
8.
Phylogenetic Analysis of Invasive Serotype 1 Pneumococcus in South Africa, 1989 to 2013.
J Clin Microbiol
; 54(5): 1326-34, 2016 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-26962082
9.
Modulation of multidrug-resistant clone success in Escherichia coli populations: a longitudinal, multi-country, genomic and antibiotic usage cohort study.
Lancet Microbe
; 5(2): e142-e150, 2024 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-38219757
10.
Inferring the heritability of bacterial traits in the era of machine learning.
Bioinform Adv
; 3(1): vbad027, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-36974068
11.
Mge-cluster: a reference-free approach for typing bacterial plasmids.
NAR Genom Bioinform
; 5(3): lqad066, 2023 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-37435357
12.
Evolutionary and functional history of the Escherichia coli K1 capsule.
Nat Commun
; 14(1): 3294, 2023 06 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-37322051
13.
Strong pathogen competition in neonatal gut colonisation.
Nat Commun
; 13(1): 7417, 2022 12 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-36456554
14.
Key features of pneumococcal isolates recovered in Central and Northwestern Russia in 2011-2018 determined through whole-genome sequencing.
Microb Genom
; 8(9)2022 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-36112007
15.
Changes in serotype prevalence of Streptococcus pneumoniae in Southampton, UK between 2006 and 2018.
Sci Rep
; 12(1): 13332, 2022 08 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-35922536
16.
Widespread sharing of pneumococcal strains in a rural African setting: proximate villages are more likely to share similar strains that are carried at multiple timepoints.
Microb Genom
; 8(2)2022 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-35119356
17.
Comparative Genomics of Disease and Carriage Serotype 1 Pneumococci.
Genome Biol Evol
; 14(4)2022 04 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35439297
18.
A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV.
Microb Genom
; 8(4)2022 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-35384831
19.
Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study.
Lancet Microbe
; 3(10): e735-e743, 2022 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35985351
20.
A high-throughput multiplexing and selection strategy to complete bacterial genomes.
Gigascience
; 10(12)2021 12 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-34891160