A sustainable approach for fluoride treatment using coconut fiber cellulose as an adsorbent.

In developing countries like India, an economically viable and ecologically approachable strategy is required to safeguard the drinking water. Excessive fluoride intake through drinking water can lead to dental fluorosis, skeletal fluorosis, or both. The present study has been under with an objective to investigate the feasibility of using cellulose derived from coconut fiber as an adsorbent under varying pH conditions for fluoride elimination from water. The assessment of equilibrium concentration of metal ions using adsorption isotherms is an integral part of the study. This present finding indicates the considerable effect of variation of adsorbent dosages on the fluoride removal efficiency under constant temperature conditions of 25 ± 2 °C with a contact period of 24 h. It is pertinent to mention that maximum adsorption of 88% has been observed with a pH value of 6 with 6 h time duration with fluoride dosage of 50 mg/L. The equilibrium concentration dwindled to 0.4 mg/L at fluoride concentration of 20 mg/L. The Langmuir model designates the adsorption capacity value of 2.15 mg/L with initial fluoride concentration of 0.21 mg/g with R2 value of 0.660. Similarly, the adsorption capacity using Freundlich isotherms is found to be 0.58 L/g and 0.59 L/g with fluoride concentration of 1.84 mg/L and 2.15 mg/L respectively. The results from the present study confirm that coconut fiber possesses appropriate sorption capabilities of fluoride ion but is a pH dependent phenomenon. The outcomes of the study indicate the possible use of cellulose extracted from waste coconut fiber as a low-cost fluoride adsorbent. The present study can be well implemented on real scale systems as it will be beneficial economically as well as environmentally.

Phenol biodegradation using bio-filter tower packed column with immobilized bacterial consortium: a batch test study.

The effluents from pulp and paper manufacturing industries contain high concentrations of phenol, which when discharged directly into surface water streams, increases the biological oxygen demand (BOD) and chemical oxygen demand (COD). In this study, two dominant bacteria SP-4 and SP-8 were isolated from the effluent emanating with a pulp and paper industry. The selected phenol-degrading isolates were identified as Staphylococcus sp. and Staphylococcus sciuri respectively by using nucleotide sequence alignment and phylogenetic analysis of 16 S rRNA regions of the genome. The two isolates used for the biodegradation process effectively degraded phenol concentration of pulp and paper industry effluent upto 1600 and 1800 mg/L resepctively. The individual isolates and consortium were immobilized using activated carbon, wood dust, and coal ash. Additionally, the effluent was treated using a bio-filter tower packed column immobilized with bacterial cells at a constant flow rate of 5 mL/min. The present study showed that the developed immobilized microbial consortium can effectively degrade 99% of the phenol present in pulp and paper industry effluents, resulting in a significant reduction in BOD and COD of the system. This study can be well implemented on real-scale systems as the bio-filter towers packed with immobilized bacterial consortium can effectively treat phenol concentrations up to 1800 mg/L. The study can be implemented for bioremediation processes in phenolic wastewater-contaminated sites.

Synergistic sustainability: Future potential of integrating produced water and CO2 for enhanced carbon capture, utilization, and storage (CCUS).

Produced water (PW) and carbon dioxide (CO2) are traditionally considered waste streams the oil and gas industry and other sectors generate. However, these waste products are examples of "waste to wealth" products with a dual nature of being valuable products or disposable byproducts. PW contains various elements and compounds that can be extracted and used in the manufacturing or chemical processing industry. Concentrated brine is generated from PW and can be used as feedstock in chemical processes. On the other hand, excess CO2 produced in various industrial processes needs to be sequestered either through non-conversion processes, such as enhanced oil recovery and storage in geological formations, or through CO2 conversion processes into fuels, polymers, and chemicals. While there is growing interest in reusing these products individually, no studies have explored the opportunities for producing additional chemicals or valuable products by combining CO2 and PW waste streams (CO2-PW). This study identifies the potential resources that can be generated by combining the beneficial reuse of PW and CO2 conversion processes. CO2-PW chemical conversion presents an opportunity to expand the carbon capture, utilization, and storage (CCUS) mix while reducing the environmental impact of disposing of these byproducts. The advantages of utilizing these waste streams for diverse applications are linked with the sustainable management of PW and decarbonization, contributing positively to a more responsible approach to resource management and climate change mitigation.

Emerging pollutant in surface water bodies: a review on monitoring, analysis, mitigation measures and removal technologies of micro-plastics.

Water bodies play a crucial role in supporting life, maintaining the environment, and preserving the ecology for the people of India. However, in recent decades, human activities have led to various alterations in aquatic environments, resulting in environmental degradation through pollution. The safety of utilizing surface water sources for drinking and other purposes has come under intense scrutiny due to rapid population growth and industrial expansion. Surface water pollution due to micro-plastics (MPs) (plastics < 5 mm in size) is one of the emerging pollutants in metropolitan cities of developing countries because of its utmost resilience and synthetic nature. Recent studies on the surface water bodies (river, pond, Lake etc.) portrait the correlation between the MPs level with different parameters of pollution such as specific conductivity, total phosphate, and biological oxygen demand. Fibers represent the predominant form of MPs discovered in surface water bodies, exhibiting fluctuations across seasons. Consequently, present study prioritizes understanding the adaptation, prevalence, attributes, fluctuations, and spatial dispersion of MPs in both sediment and surface water environments. Furthermore, the study aims to identify existing gaps in the current understanding and underscore opportunities for future investigation. From the present study, it has been reported that, the concentration of MPs in the range of 0.2-45.2 items/L at the Xisha Islands in the south China sea, whereas in India it was found in the range of 96 items/L in water samples and 259 items/kg in sediment samples. This would certainly assist the urban planners in achieving sustainable development goals to mitigate the increasing amount of emergent pollutant load.

Anaerobic digestion of herbal waste: a waste to energy option.

Herbal waste produced during the manufacturing of herbal products is a potential feedstock for anaerobic digestion due to high amount of organic matter that can be transformed into biogas as an energy resource. Therefore, the present study was undertaken to convert herbal waste produced during the manufacturing of common of Ayurveda products into biogas through anaerobic digestion process using batch test study under controlled mesophilic temperature conditions of 35 °C with food to inoculum ratio of 0.75. The maximum biomethane potential (BMP) of 0.90 (gCH4COD/g CODfed) and sludge activity of 0.70 (gCH4-CD/gVSS) was exhibited by WS herbal waste owing to its high chemical oxygen demand (COD) of 4 g/g and better solubilization potential of the organic matter showing change in volatile suspended solids (ΔVSS) of 79%. On the other hand, the waste derived from the TA herb, exhibited the least biogas yield of 0.55 (gCH4COD/g CODfed) and sludge activity of 0.40 (gCH4-CD/gVSS), albeit with higher organic matter present. This was due to the possible hindrance of waste solubilization by the presence of lignin. The waste derived from VVL and PE showed intermediate BMP and sludge activity. The methane generation rate constant (k), a key indicator of the biodegradation potential, was also evaluated. The k values showed similar trend as of BMP values ranging from 0.081 to 0.15 d-1 thus indicating the influence of presence of lignin and the change in ΔVSS. The present study proves anaerobic digestion to be an alternative treatment method to be a milestone for management of herbal wastes and can be successfully implemented on real-scale systems.

ATP-binding cassette transporters expression profiling revealed its role in the development and regulating stress response in Solanum tuberosum.

The ATP-binding cassette (ABC) transporter gene family plays a vital role in substance transportation, including secondary metabolites, and phytohormones across membranous structures. It is still uncovered in potato (Solanum tuberosum), grown worldwide as a 3rd important food crop. The current study identified a total of 54 Stabc genes in potato genome. The accumulative phylogenetic tree of Stabc with arabidopsis, divided into eight groups (ABCA to ABCH). ABCG was the most prominent group covering 90% of Stabc genes, followed by ABCB group. The number and architecture of exon-intron varied from gene to gene. In addition, the presence of stress-responsive elements in the regulatory regions depicted their role in environmental stress. Furthermore, the tissue-specific and stress-specific expression profiling of Stabc genes and their validation through real-time-qPCR analysis revealed their role in development and stress. The presented results provided useful information for further functional analysis of Stabc genes and can also use as a reference study for other important crops.

Life-cycle assessment approach for municipal solid waste management system of Delhi city.

The life-cycle assessment (LCA) approach with route optimization technique was adopted in the present study to evaluate environmental and economic aspects associated with the prevalent waste management system in Delhi city. With an objective of cost minimization and abating environmental hazards from waste transportation systems, ArcGIS was used to identify the most appropriate route for waste transportation. The study was conducted considering four landfills located at Bawana, Bhalswa, Ghazipur and Okhla present in Delhi city. Landfilling, composting, anaerobic digestion, and recycling methods were analyzed for global warming potential (GWP), eutrophication potential (EP), acidification potential, abiotic resource depletion potential and photochemical oxidation potential parameters using LCA software GaBiPro. The results from the LCA studies for the municipal solid waste management system of Delhi city revealed that transportation emissions and landfilling negatively impact the environment. The effect of recycling rate on the landfilling, composting, anaerobic digestion was also studied using sensitivity analysis. Results of sensitivity analysis depicted that recycling of waste is inversely related to the impact categories. Overall, the results exhibited a detrimental effect of landfilling on the environment in terms of GWP and EP. Further, considering the geospatial analysis, two waste recycling stations are proposed in the vicinity of existing waste management plants to reduce the time and cost of waste transport from the landfills to the waste management plants.

Expression profiling of pathogenesis-related Protein-1 (PR-1) genes from Solanum tuberosum reveals its critical role in phytophthora infestans infection.

Pathogen-related (PR) proteins are an integral part of plants' defense mechanisms against various types of biotic and abiotic stresses. A little is known about the importance of these PR proteins in potato defense mechanisms. In the current study, a total of 22 pathogenesis-related 1 genes were identified in the potato genome. All identified proteins possessed the CAP superfamily domain with some other motifs. The cis-acting elements analysis identified several stress-responsive elements, including MYB, ABRE, and MeJRE. The gene duplication events demonstrated purifying and positive selection pressure. Expression profiling showed high transcripts level in root compared to other tissues; however, some genes have tissue-specific expression. Furthermore, the PR-1-5 gene is transcriptionally induced under Phytophthora infestans stress and hormonal (ABA and IAA) treatments. The Real-Time qPCR analysis also validated the RNA-seq data results of genes with maximum expression in roots compared to leaves and stems. The current study results provided basic data for functional characterization and can also use as a reference study for other important crops.

Comparative phylogenetic analysis of aquaporins provides insight into the gene family expansion and evolution in plants and their role in drought tolerant and susceptible chickpea cultivars.

Aquaporins (AQPs) are water channel proteins that play a significant role in drought stress. Although the AQPs identified in multiple plant species, there is no detailed evolutionary and comparative study of AQPs regarding chickpea plant. The current study involved evolutionary analyses coupled with promoter and expression analyses of chickpea AQPs (CaAQPs). A total of 924 non-redundant AQPs were studied in 24 plant species including algae, mosses, lycophytes, monocots and dicots. Phylogenetic analysis demonstrated a clear divergence of eight AQP subfamilies (LIPs, SIPs, GIPs, NIPs, XIPs, PIPs, HIPs and TIPs). The comparative phylogenetic trees of AQP subfamilies among Arabidopsis, soybean, common bean, maize and chickpea demonstrated that the AQPs were highly species-specific. Interestingly, the dual NPA motif was conserved in all species. However, the ar/R selectivity filter signatures [W/T/S/N/G/A]-[V/S/L/I/A]-[S/G/A]-R (in NIPs), F-H-T-R (in PIPs), [H/N/Q/S]-[A/I/L/S/V]-[A/G]-[A/C/L/M/R/V] (in TIPs) and [V/I/L/M]-[V/I/A/F/M]-[A/S/F/C]-[N/F/L/I/A/S (in SIPs) were found in five species. Moreover, the Froger's positions (P1-P5) were found as [F/L/Y]-[S/T]-A-Y-[L/I/M/V/F] (in NIPs), [Q/E/M]-S-A-F-W (in PIPs), [A/L/S/T/V]-[A/C/N/S/T/V]-[P/R/S]-[Y/N/F]-[W/Q] (in TIPs) and [I/M/F]-[A/V]-[A/V]-Y-W (in SIPs). The MEME motif analyses showed that most of the motifs were specific to subfamily and subgroups. Tissue-specific expression profiling of CaAQPs revealed that CaTIPs and CaPIPs are highly expressed in most of the tissues, while CaNIPs and CaSIPs have low expression. In promoter analysis of CaAQPs, multiple stress-related cis-acting elements e.g. MYB, MYC, ABRE, etc. were found. Semi-quantitative RT-PCR analysis showed that CaPIP2;3 and CaNIP3;1 are positive regulator, while CaSIP1;1 and CaPIP2;1 have a negative role in drought tolerance. The findings and implications of this study are discussed in detail.

Rapid composting techniques in Indian context and utilization of black soldier fly for enhanced decomposition of biodegradable wastes - A comprehensive review.

In the present scenario, solid waste management (SWM) has become one of the main concerns for urban waste managers in the developing world. This article reviews the recent trends and technologies associated with the process of composting. Utilization of black soldier fly (BSF) larvae can be one of the rapid methods for treatment of biodegradable wastes. A detailed review of the literature indicated that more importance is to be given on the pre-processing of Municipal Solid Waste (MSW) which includes segregation of biodegradables, inerts, metals for preparing the requisite substrate for application of the suitable technology. In developing countries, major emphasis should be given on curtailing the environmental and health impacts caused due to improper management of MSW and for developing some innovative as well as economically feasible systems for proper handling of MSW. BSF can transform the biodegradable wastes into biofuels and byproducts at a minimal cost. The utilization of BSF for treating various organic waste (OW) has been thoroughly studied and discussed in detail. The salient observations on the factors affecting the growth of BSF larvae as well as comprehensive analysis of patents on breeding and utilization of BSF are also presented in this paper. The present review also assesses the potential of various rapid composting techniques and advocates about the planning and development of real-scale treatment systems by the researchers, environmental planners and policy makers to eradicate the problem of solid wastes.

Dominance of Cotton leaf curl Multan virus-Rajasthan strain associated with third epidemic of cotton leaf curl disease in Pakistan.

Cotton (Gossypium hirsutum) is an economically potent crop in many countries including Pakistan, India, and China. For the last three decades, cotton production is under the constant stress of cotton leaf curl disease (CLCuD) caused by begomoviruses/satellites complex that is transmitted through the insect pest, whitefly (Bemisia tabaci). In 2018, we identified a highly recombinant strain; Cotton leaf curl Multan virus-Rajasthan (CLCuMuV-Raj), associated with the Cotton leaf curl Multan betasatellite-Vehari (CLCuMuBVeh). This strain is dominant in cotton-growing hub areas of central Punjab, Pakistan, causing the third epidemic of CLCuD. In the present study, we have explored the CLCuD diversity from central to southern districts of Punjab (Faisalabad, Lodhran, Bahawalpur, Rahimyar Khan) and the major cotton-growing region of Sindh (Tandojam), Pakistan for 2 years (2020-2021). Interestingly, we found same virus (CLCuMuV-Raj) and associated betasatellite (CLCuMuBVeh) strain that was previously reported with the third epidemic in the central Punjab region. Furthermore, we found minor mutations in two genes of CLCuMuV-Raj C4 and C1 in 2020 and 2021 respectively as compared to its isolates in 2018, which exhibited virus evolution. Surprisingly, we did not find these mutations in CLCuMuV-Raj isolates identified from Sindh province. The findings of the current study represent the stability of CLCuMuV-Raj and its spread toward the Sindh province where previously Cotton leaf curl Kokhran virus (CLCuKoV) and Cotton leaf curl Shahdadpur virus (CLCuShV) have been reported. The findings of the current study demand future research on CLCuD complex to explore the possible reasons for prevalence in the field and how the virus-host-vector compatible interaction can be broken to develop resistant cultivars.

Comparative analysis, diversification, and functional validation of plant nucleotide-binding site domain genes.

Nucleotide-binding site (NBS) domain genes are one of the superfamily of resistance genes involved in plant responses to pathogens. The current study identified 12,820 NBS-domain-containing genes across 34 species covering from mosses to monocots and dicots. These identified genes are classified into 168 classes with several novel domain architecture patterns encompassing significant diversity among plant species. Several classical (NBS, NBS-LRR, TIR-NBS, TIR-NBS-LRR, etc.) and species-specific structural patterns (TIR-NBS-TIR-Cupin_1-Cupin_1, TIR-NBS-Prenyltransf, Sugar_tr-NBS etc.) were discovered. We observed 603 orthogroups (OGs) with some core (most common orthogroups; OG0, OG1, OG2, etc.) and unique (highly specific to species; OG80, OG82, etc.) OGs with tandem duplications. The expression profiling presented the putative upregulation of OG2, OG6, and OG15 in different tissues under various biotic and abiotic stresses in susceptible and tolerant plants to cotton leaf curl disease (CLCuD). The genetic variation between susceptible (Coker 312) and tolerant (Mac7) Gossypium hirsutum accessions identified several unique variants in NBS genes of Mac7 (6583 variants) and Coker312 (5173 variants). The protein-ligand and proteins-protein interaction showed a strong interaction of some putative NBS proteins with ADP/ATP and different core proteins of the cotton leaf curl disease virus. The silencing of GaNBS (OG2) in resistant cotton through virus-induced gene silencing (VIGS) demonstrated its putative role in virus tittering. The presented study will be further helpful in understanding the plant adaptation mechanism.

Evaluation of corrosion and scaling tendency of polyester textile dyeing effluent, Haridwar, Uttarakhand, India.

Textile dyeing industries are regarded as one of the most polluting by virtue of the chemicals used and wastewater released. A great deal of chemicals, fasteners, dispersing agents is employed in the stages of dyeing and finishing. The aim of the study was to evaluate scaling and corrosion tendency of polyester textile dyeing effluent using Langelier saturation index (LSI), Ryznar stability index (RSI), and aggressiveness index (AI). The estimation of water stability indices helps in assessing the scaling and corrosive nature of wastewater which in turn facilitates evaluating the condition of the pipelines and valves. Wastewater released from textile dyeing units contains high levels of color (892 ± 20Pt-Co), chemical oxygen demand (2461 ± 48.45 mg/L), electrical conductivity (2906 ± 5.77 µS/cm), and sulfate (6620 ± 7.22 mg/L). The LSI ranged from 2.12 to 3.45, RSI varied from 2.84 to 5.62, and AI varied from 13.67 to 14.99. It was found from the results that the polyester textile dyeing effluent was scaling and non-aggressive. Also, the pipes containing this effluent have to undergo regular maintenance so that they are not blocked by scales which can render financial losses to the industry.

A comparative study on compost preparation using lab prepared eco-enzyme and its effect on growth of plant species Phaseolus vulgaris.

The augmented rise in population in the last few decades has resulted in gigantic increase in the solid waste production in India and around the globe. The conventional composting methods are slow and sluggish process that has resulted in the advancement techniques for the emergence in new rapid composting processes. Use of eco-enzyme is such a rapid technique that helps to degrade the solid waste in a very accelerative manner. The present study has been carried out by preparing eco-enzyme using the kitchen waste and with the objective to utilize it for degradation of agricultural wastes and preparing compost for its utilization for different plant species as soil conditioner and fertilizer. The prepared eco-enzyme was added during the composting process in each batch with concentration variations of 10%, 15%, and 20% (V/V) once every week. The pH value of the final prepared compost was found to be within the neutral range of 6.51 ± 0.03-7.88 ± 0.50 in all the samples. Overall compost prepared using 10% eco-enzyme has the highest growth promoting effects for Phaseolus vulgaris. The present study will be having twofold advantage as the environment will get rid of such wastes as the same can be utilized as resource and it will also be helpful for the farmers from economical point of view.

Kinetic Study for Startup of Aerobic Moving Bed Biofilm Reactor in Treatment of Textile Dye Wastewater.

Due to high augmentation in population and low availability of land, the quantum of wastewater production has surged resulting in advancements in wastewater treatment systems. To cope under such stressful circumstances, moving bed biofilm reactor (MBBR) proves to be an upgraded treatment technology for industrial and municipal wastewater treatment. The present startup study has been carried out using a laboratory-scale aerobic MBBR with working volume of 25L for textile dye wastewater treatment having AnoxKaldnes K3 media at filling percentage of 50%. In order to acclimatize the microorganisms on textile dye wastewater, the startup of the reactor was carried out using lactose as readily degradable co-substrate with textile dye wastewater in different ratios at hydraulic retention time (HRT) of 24 h. The biofilm on the media was developed in 63 days duration and the reactor attained pseudo-steady state (PSS) in 185 days period. During PSS condition of the MBBR, the maximum chemical oxygen demand (COD) removal efficiency of 92% with mixed liquor suspended solids (MLSS) concentration of 4224 ± 22 mg/L has been achieved. The kinetic study for biodegradation of textile dye wastewater has also been carried out using the Monod growth kinetics. The values of bio-kinetic coefficients of yield of heterotrophic biomass (Y) and endogenous decay coefficient for heterotrophic biomass (Kd) recorded are 0.394 mgVSS/mgCOD.d and 0.087 day-1, respectively. The values of specific substrate removal rate (k), Monod half saturation constant (Ks), and maximum specific growth rate for heterotrophic biomass (µmax) are 0.024 mgCOD/mgVSS.d, 53.203 mg/L, and 0.0095 day-1, respectively, demonstrating the suitability and healthy performance of MBBR for textile dye wastewater treatment.

Groundwater quality index development using the ANN model of Delhi Metropolitan City, India.

Groundwater is widely recognized as a vital source of fresh drinking water worldwide. However, the rapid, unregulated population growth and increased industrialization, coupled with a rise in human activities, have significantly harmed the quality of groundwater. Changes in the local topography and drainage systems in an area have negative impacts on both the quality and quantity of groundwater. This underscores the critical need to assess the susceptibility of groundwater to pollution and implement measures to mitigate these risks. The water quality index (WQI) is an approach that simulates the water quality at peculiar locations for a particular period of time. The artificial neural network (ANN) model approach is such an idealistic methodology that can be utilized for WQI development and provides better results for specific locations in optimum time. Therefore, the goal of the current study is to provide a unique way for using artificial neural networks (ANN) to characterize the groundwater quality of Delhi Metropolitan City, India. In order to make the water fit for residential and drinking use, the research also pinpoints the geographical variability and spots where the contaminated region has to be sufficiently cleaned. A minimum WQI of 41.51 was obtained at the Jagatpur location while a maximum value of 779.01 was at the Peeragarhi location. During the training phase, the results obtained using the ANN model were highly favorable, demonstrating a strong association with an R-value of 98.10%, thus highlighting the program's exceptional efficiency. However, in accordance with the correlation regression findings, the prediction outcomes of the ANN model in testing are observed to be an R-value of 99.99-100%. This study confirms the promise and advantages of employing advanced artificial intelligence in managing groundwater quality in the studied area.

Water Quality Index Assessment of River Ganga at Haridwar Stretch Using Multivariate Statistical Technique.

The Ganges (Ganga) river contributes significant water resources for the ecology and economy, but it frequently encounters severe deterioration due to cumulative impact from upstream natural and anthropogenic variables. Knowledge and understanding of the dynamic behavior of such networks remain a significant challenge, particularly in the context of rising environmental pressures, such as climate change and industrialization, as well as constraints in both process and data understanding across geographies. An interdisciplinary approach is required to be developed to investigate the hydrogeochemical dynamics and anthropogenic sources influencing water quality in major river systems. The present study has been carried out to evaluate the characterization of river water quality in terms of the physico-chemical & bacteriological parameters. Also, the development of a water quality index (WQI) for Domestic (drinking) and Spiritual (bathing) usage is a part of the study. The water quality index has been developed using the Canadian Council of Ministers of the Environmental Water Quality Index (CCME WQI). The river's water quality index score in the present study lies in the range of 38.32 to 79.82, indicating the quality of water from fair to poor for drinking purposes. The highest water quality index value of 79.82 has been observed at Guru Kashnik Ghat, while the lowest WQI value of 38.32 has been observed at Har ki Pauri for drinking purposes. However, the water quality score for bathing purposes ranged from 71.04 to 91.22 thus signifying the quality of the water from fair to good for bathing purposes. The highest water quality index value of 91.22 has been assessed at Guru Kashnik Ghat, while the lowest WQI value of 71.04 has been assessed at Bhimgoda Barrage. The developed water indices assessment in the present study will be beneficial for society to provide a benchmark for the control of water pollution in River Ganga. These findings will support policymakers and stakeholders in addressing water quality issues in a more efficient and effective manner. The study also emphasizes the requirement for ongoing water quality monitoring and evaluation in order to guarantee the long-term well-being of the river and its ecosystems.

Cotton Mi-1.2-like Gene: A potential source of whitefly resistance.

Whitefly (Bemisia tabaci) inflicts tremendous yield losses to cotton crops in many parts of the world by sap-sucking and transmitting viral diseases. The tomato-associated Mi-1.2 gene has been successfully deployed in tomato cultivars to attain whitefly resistance. In the current study, putative Mi-1.2-like orthologs were identified in five whitefly hosts and functionally validated through virus-inducing gene silencing (VIGS) in cotton plants. The expression profiling and qPCR results depicted differential regulation of the Mi-1.2-like gene in various tissue types and under different biotic and abiotic stresses, especially in whitefly susceptible and resistant cotton plants. The upregulation of the Mi-1.2-like gene (Gadrp RPP-13 Like gene) was observed at 24 h and 48 h post-whitefly exposure (PWFE) in whitefly resistant (FDH-228) and tolerant (Mac7) cotton plants as compared to susceptible plants of Coker-312. However, delayed expression was recorded at 72 h of PWFE in Coker-312 plants. In TRV based gene silencing experiment, silencing of the Mi-1.2-like gene, significantly enhanced the whitefly infestation on both whitefly-resistant and susceptible cotton genotypes. Based on these results, we conducted the evolutionary analysis of Mi-1.2-like orthologs among cotton, cassava, tomato, papaya, and cucumber hosts. This indicated that cotton associated Mi-1.2 like gene has a close relation with cassava and tomato. These results suggested that Mi-1.2-like R genes could be the potential candidate for deriving whitefly resistance response in cotton plants.

Whole-Genome Resequencing Deciphers New Insight Into Genetic Diversity and Signatures of Resistance in Cultivated Cotton Gossypium hirsutum.

Cotton is an important crop that produces fiber and cottonseed oil for the textile and oil industry. However, cotton leaf curl virus disease (CLCuD) stress is limiting its yield in several Asian countries. In this study, we have sequenced Mac7 accession, a Gossypium hirsutum resistance source against several biotic stresses. By aligning with the Gossypium hirsutum (AD1) 'TM-1' genome, a total of 4.7 and 1.2 million SNPs and InDels were identified in the Mac7 genome. The gene ontology and metabolic pathway enrichment indicated SNPs and InDels role in nucleotide bindings, secondary metabolite synthesis, and plant-pathogen interaction pathways. Furthermore, the RNA-seq data in different tissues and qPCR expression profiling under CLCuD provided individual gene roles in resistant and susceptible accessions. Interestingly, the differential NLR genes demonstrated higher expression in resistant plants rather than in susceptible plants expression. The current resequencing results may provide primary data to identify DNA resistance markers which will be helpful in marker-assisted breeding for development of Mac7-derived resistance lines.