RESUMO
A Gram-stain-negative and strictly aerobic bacterium, designated DMHB-2T, was isolated from a sample of seawater collected off the Yellow Sea coast of the Republic of Korea. Cells were short rods and motile by means of a single polar flagellum. Catalase and oxidase activities were positive. Growth occurred at pH 5.5-10.0 (optimum, pH 6.0), 15-45 °C (optimum, 25 °C) and with 1-9â% NaCl (optimum, 3â%). The respiratory quinone was ubiquinone-8 and the major fatty acids were C16â:â0 (17.9â%), summed feature 3 (C16â:â1ω7c and/or C16â:â1ω6c; 26.1â%) and summed feature 8 (C18â:â1ω7c and/or C18â:â1ω6c; 37.4â%). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain DMHB-2T belong to the genus Marinobacterium, with the highest 16S rRNA gene sequence similarity of 95.2â% to Marinobacterium zhoushanense KCTC 42782T. The genomic DNA G+C content of strain DMHB-2T was 60.8 mol%. On the basis of the phenotypic, chemotaxonomic and genotypic characteristics presented in this study, strain DMHB-2T is suggested to represent a novel species of the genus Marinobacterium, for which the name Marinobacteriumboryeongense sp. nov. is proposed. The type strain is DMHB-2T (=KACC 19225T=JCM 31902T).
Assuntos
Oceanospirillaceae/classificação , Filogenia , Água do Mar/microbiologia , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Oceanospirillaceae/isolamento & purificação , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Ubiquinona/químicaRESUMO
A Gram-stain-negative, non-motile and facultative anaerobic bacterium, designated CAM-8T, was isolated from an artificial fountain at Chonbuk National University, South Korea. The novel strain grew at 20-37 °C (optimum 25 °C), pH 5.5-7.0 (optimum 6.0) and with 0-2â% NaCl (optimum 0â%). Oxidase and catalase activities were positive. The cell morphology of strain CAM-8T was atypical rods 0.6-0.8 µm in width and 4.5-6.5 µm in length, with a peaked tip and sometimes a bulb shape. CAM-8T existed as single cells, and as pairs or chains of cells. The phylogenetic analysis of 16S rRNA gene sequences indicated that strain CAM-8T clustered with Gemmobacter nectariphilus JCM 11959T and Gemmobactermegaterium JCM 18498T within the genus Gemmobacter. The DNA G+C content of strain CAM-8T was 65.9 mol%. The respiratory quinone was ubiquinone Q-10. The major fatty acids were C18â:â1ω7c and/or C18â:â1ω6c. The polar lipids of strain CAM-8T consisted of phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, two uncharacterized phospholipids, an uncharacterized aminolipid, an uncharacterized glycolipid, an uncharacterized aminophospholipid and four uncharacterized lipids. On the basis of phenotypic, phylogenetic and chemotaxonomic data, strain CAM-8T (=KACC 19224T=JCM 31905T) is considered to represent a novel species of the genus Gemmobacter, for which the name Gemmobacter straminiformis sp. nov. is proposed.
Assuntos
Filogenia , Rhodobacteraceae/classificação , Microbiologia da Água , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , República da Coreia , Rhodobacteraceae/genética , Rhodobacteraceae/isolamento & purificação , Análise de Sequência de DNA , Ubiquinona/químicaRESUMO
A novel bacterial strain, designated GCR0105(T), was isolated from a water sample of the Mangyung estuary enclosed by the Saemangeum Embankment, located in JEOLlabuk-do, South Korea. Cells of strain GCR0105(T) were Gram-stain-negative, non-motile and rod-shaped. Colonies of strain GCR0105(T) were pale yellow-pigmented on R2A agar and nutrient agar media, and were able to grow at 15-30 °C (optimum 25 °C) and pH 6.5-8.5 (optimum pH 7.5). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain GCR0105(T) was related most closely to Flavisolibacter ginsengisoli Gsoil 643(T) (93.14% similarity). The polar lipid profile of strain GCR0105(T) comprised phosphatidylethanolamine, two unknown aminolipids, an unknown aminophospholipid and four unknown lipids. The DNA G+C content of strain GCR0105(T) was 42.9 mol% and the respiratory quinone was MK-7.On the basis of phenotypic, chemotaxonomic and phylogenetic properties, strain GCR0105(T) represents a novel species in a new genus within the family Chitinophagaceae, for which the name Flaviaesturariibacter amylovorans gen. nov., sp. nov. is proposed. The type strain of Flaviaesturariibacter amylovorans is GCR0105(T) ( = KACC 16454(T) = JCM 17919(T)).
Assuntos
Bacteroidetes/classificação , Estuários , Filogenia , Microbiologia da Água , Técnicas de Tipagem Bacteriana , Bacteroidetes/genética , Bacteroidetes/isolamento & purificação , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Dados de Sequência Molecular , Fosfatidiletanolaminas/química , Pigmentação , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Espermidina/análogos & derivados , Espermidina/química , Amido/metabolismo , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMO
A taxonomic study was carried out on a novel bacterial strain, designated MIC2002(T), which was isolated from Wibong falls in Korea. Cells were Gram-stain-negative, aerobic, non-motile and rods, 0.3-0.5 µm wide and 4.0-5.0 µm long. The optimum temperature and pH range for growth were 25 °C and pH 6.5-7.0, respectively. Catalase and oxidase activities were positive. Flexirubin pigments were not produced. Comparison of the 16S rRNA gene sequences indicated that the isolate belonged to the genus Pedobacter, with Pedobacter daechungensis as its closest relative, with a similarity of 94.4%. It contained iso-C(15:0), anteiso-C(15:0), C(16:0), summed feature 3 (C(16:1)ω6c and/or C(16:1)ω7c) and iso-C(17:0) 3-OH as the major fatty acids and menaquinone MK-7 as isoprenoid quinone. The polar lipid profile of strain MIC2002(T) revealed the presence of phosphatidylethanolamine and an unknown lipid. The DNA G+C content of the strain was 34.7 mol%. On the basis of the evidences presented, it was concluded that strain MIC2002(T) represents a novel species of the genus Pedobacter within the family Sphingobacteriaceae, for which the name Pedobacter pituitosus sp. nov. is proposed. The type strain is MIC2002(T) (â=KACC 17064(T)â=JCM 18729(T)).
Assuntos
Pedobacter/classificação , Filogenia , Microbiologia da Água , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Água Doce/microbiologia , Dados de Sequência Molecular , Pedobacter/genética , Pedobacter/isolamento & purificação , Fosfatidiletanolaminas/química , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMO
A taxonomic study was carried out on a novel bacterial strain, designated MIC1008(T), which was isolated from the Gomso salt pan, located in Buan County, Korea. Cells were Gram-stain-negative, aerobic, non-motile and moderately halophilic rods, 0.2-0.4 µm wide and 0.7-1.2 µm long. The optimum temperature and pH for growth were 25 °C and pH 6.5-8.5, respectively. Catalase and oxidase activities were positive. Carotenoid pigments were produced. Comparison of 16S rRNA gene sequences indicated that the isolate belonged to the genus Psychroflexus, with Psychroflexus halocasei WCC 4520(T) as its closest relative, with a 16S rRNA gene sequence similarity of 95.4%. The isolate contained iso-C15:0, iso-C15:1 G, iso-C17:0 3-OH, anteiso-C15:0 and iso-C15:0 3-OH as the major fatty acids and menaquinone MK-6 as the isoprenoid quinone. The major polar lipid profile of strain MIC1008(T) revealed the presence of phosphatidylethanolamine, an unidentified aminolipid and two unidentified lipids. The DNA G+C content of the isolate was 32.9 mol%. On the basis of the evidences presented, it is concluded that strain MIC1008(T) represents a novel species of the genus Psychroflexus within the family Flavobacteriaceae, for which the name Psychroflexus http://dx.doi.org/10.1601/nm.8182 salarius sp. nov. is proposed. The type strain is MIC1008(T) ( = KACC 17063(T) = DSM 25661(T)).
Assuntos
Flavobacteriaceae/classificação , Filogenia , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Flavobacteriaceae/genética , Flavobacteriaceae/isolamento & purificação , Dados de Sequência Molecular , Fosfatidiletanolaminas/química , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMO
The mpkB gene of Aspergillus nidulans encodes a MAP kinase homologous to Fus3p of Saccharomyces cerevisiae which is involved in conjugation process. MpkB is required for completing the sexual development at the anastomosis and post-karyogamy stages. The mpkB deletion strain could produce conidia under the repression condition of conidiation such as sealing and even in the submerged culture concomitant with persistent brlA expression, implying that MpkB might have a role in timely regulation of brlA expression. The submerged culture of the deletion strain showed typical autolytic phenotypes including decrease in dry cell mass (DCM), disorganization of mycelial balls, and fragmentation of hyphae. The chiB, engA and pepJ genes which are encoding cell wall hydrolytic enzymes were transcribed highly in the submerged culture. Also, we observed that the enzyme activity of chitinase and glucanase in the submerged culture of mpkB deletion strain was much higher than that of wild type. The deletion of mpkB also caused a precocious germination of conidia and reduction of spore viability. The expression of the vosA gene, a member of velvet gene family, was not observed in the mpkB deletion strain. These results suggest that MpkB should have multiple roles in germination and viability of conidia, conidiation and autolysis through regulating the expression of vosA and brlA.
Assuntos
Aspergillus nidulans/enzimologia , Aspergillus nidulans/crescimento & desenvolvimento , Autólise , Quinases de Proteína Quinase Ativadas por Mitógeno/metabolismo , Esporos Fúngicos/crescimento & desenvolvimento , Aspergillus nidulans/citologia , Aspergillus nidulans/genética , Deleção de Genes , Regulação Fúngica da Expressão Gênica , Hifas/citologia , Hifas/crescimento & desenvolvimento , Viabilidade Microbiana , Quinases de Proteína Quinase Ativadas por Mitógeno/genética , Esporos Fúngicos/citologiaRESUMO
A Gram-reaction-negative, rod-shaped, non-motile, red-pigmented bacterium, designated strain GSR3061(T), was isolated from a water sample of the Mangyung estuary enclosed by the Saemangeum Embankment in JEOLlabuk-do of South Korea, and characterized using a polyphasic approach. 16S rRNA gene sequence analysis of strain GSR3061(T) indicated that the isolate belonged to the phylum Bacteroidetes and exhibited similarity levels of 94.7â% to Rufibacter tibetensis NRRL B-51285(T), 92.4â% to Adhaeribacter terreus KACC 14257(T) and 91.9â% to Pontibacter korlensis KACC 15371(T). Growth was observed at 15-40 °C and pH 6.5-9.5. The major cellular fatty acids of the novel strain were summed feature 4 (comprising iso-C17â:â1 I and/or anteiso-C17â:â1 B), iso-C15â:â0, C17â:â1ω6c and iso-C16â:â1 H. Flexirubin-type pigments were absent. The DNA G+C content of strain GSR3061(T) was 44.9 mol% and the major quinone was MK-7. The polar lipid profile consisted mainly of phosphatidylethanolamine; three unidentified lipids, two unknown aminolipids, two unknown phospholipids, an unknown aminophospholipid and an unknown glycolipid were also present. On the basis of the evidence presented, it is concluded that strain GSR3061(T) represents a novel species of a new genus, for which the name Nibribacter koreensis gen. nov., sp. nov. is proposed. The type strain of Nibribacter koreensis is GSR3061(T) (â=âKACC 16450(T)â=âJCM 17917(T)).
Assuntos
Cytophagaceae/classificação , Estuários , Filogenia , Microbiologia da Água , Técnicas de Tipagem Bacteriana , Composição de Bases , Cytophagaceae/genética , Cytophagaceae/isolamento & purificação , DNA Bacteriano/genética , Ácidos Graxos/química , Dados de Sequência Molecular , Fosfolipídeos/química , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMO
A taxonomic study was carried out on a novel bacterial strain, designated MIC3010(T), which was isolated from a freshwater pond in Jeonju, Republic of Korea. Cells of the isolate were Gram-stain-negative, rod-shaped and non-motile. Comparison of the 16S rRNA gene sequences indicated that the isolate belonged to the family Flavobacteriaceae, with Flavobacterium haoranii LQY-7(T) as its closest relative, with a similarity of 94.2â%. The predominant fatty acids of strain MIC3010(T) were iso-C15â:â1 G, iso-C15â:â0 and iso-C17â:â0 3-OH. The polar lipid profile of strain MIC3010(T) revealed the presence of phosphatidylethanolamine (PE) and one unidentified lipid (L1) as major components. In addition, two aminolipids (AL1, AL2) and one glycolipid were present in small amounts. The DNA G+C content of the strain was 41.0 mol%. The strain contained MK-6 as the major quinone and sym-homospermidine as the predominant polyamine. On the basis of the evidence presented, it is concluded that strain MIC3010(T) represents a novel species of the genus Flavobacterium, for which the name Flavobacterium fontis sp. nov. is proposed. The type strain is MIC3010(T) (â=âKACC 16593(T)â=âJCM 18212(T)).
Assuntos
Flavobacterium/classificação , Água Doce/microbiologia , Filogenia , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/análise , Flavobacterium/genética , Flavobacterium/isolamento & purificação , Dados de Sequência Molecular , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Espermidina/análogos & derivados , Espermidina/análise , Vitamina K 2/análogos & derivados , Vitamina K 2/análiseRESUMO
A Gram-stain-negative, rod-shaped, non-motile and yellow-pigmented bacterial strain, designated strain JJ013(T), was isolated from an artificial lake in Jeollabuk-do, South Korea, and characterized using a polyphasic approach. The 16S rRNA gene sequence of strain JJ013(T) indicated that the isolate belonged to the family Flavobacteriaceae and exhibited similarity levels of 96.6â% to the type strains of Flavobacterium cheonanense and Flavobacterium koreense and 96.5â% to the type strain of Flavobacterium chungnamense. Growth was observed at 20-30 °C and pH 5.0-7.0. The major cellular fatty acids of the novel strain were iso-C15â:â0 (27.5â%), iso-C15â:â1 G (17.8â%), iso-C17â:â0 3-OH (9.4â%) and iso-C15â:â0 3-OH (9.2â%). Flexirubin-type pigments were present. The DNA G+C content of strain JJ013(T) was 33.9 mol%, the major respiratory quinone was menaquinone-6 (MK-6) and the major polyamine was sym-homospermidine. The polar lipid profile of the strain JJ013(T) consisted of a phosphatidylethanolamine (PE), two unknown aminolipids (AL1-2), three unidentified lipid (L1-3) and an unknown glycolipid (GL). On the basis of the morphological and physiological properties and biochemical evidence presented, it is concluded that strain JJ013(T) represents a novel species of the genus Flavobacterium, for which the name Flavobacterium aciduliphilum sp. nov. is proposed; the type strain is JJ013(T) (â=âKACC 16594(T)â=âJCM 18211(T)). Since C15â:â0, which is known as a predominant fatty acid of the genus Flavobacterium was not detected in the novel strain and other reference strains, we propose an emended description of the genus Flavobacterium.
Assuntos
Flavobacterium/classificação , Água Doce/microbiologia , Filogenia , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/análise , Flavobacterium/genética , Flavobacterium/isolamento & purificação , Glicolipídeos/análise , Dados de Sequência Molecular , Polienos/análise , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Espermidina/análogos & derivados , Espermidina/análise , Vitamina K 2/análogos & derivados , Vitamina K 2/análiseRESUMO
Two strains, designated GCR0103(T) and GYR3121(T), were isolated from seawater of the Saemangeum Embankment in Jeollabuk-do, Korea. The cells of the two strains were Gram-reaction-negative and non-motile, and formed multicellular filaments. The colonies of the two strains were pink-pigmented and able to grow at 15-37 °C (optimum 25 °C) on R2A and NA medium. Strains GCR0103(T) and GYR3121(T) grew at pH 6.5-10 (optimum pH 7.5) and pH 5.5-9.5 (optimum pH 7.5), and within NaCl ranges of 0-0.4% and 0-1%, respectively. The polar lipid profiles of the two strains contained phosphatidylethanolamine, five unknown aminolipids, an unknown phospholipid and four or five unknown lipids. The DNA G+C contents of strains GCR0103(T) and GYR3121(T) were 56.0 and 54.5 mol%, respectively. The respiratory quinone detected in both strains was MK-7. The 16S rRNA gene sequence similarity between GCR0103(T) and GYR3121(T) was 95.5â%. The 16S rRNA gene sequence similarities of the two strains to closely related reference strains were less than 89â%. Phylogenetic analysis based on 16S rRNA genes showed that GCR0103(T) and GYR3121(T) formed a distinct phyletic line in the family Cytophagaceae. On the basis of the phenotypic, chemotaxonomic and phylogenetic properties, strains GCR0103(T) and GYR3121(T) represent two novel species in a new genus within the family Cytophagaceae, for which the names Nibrella saemangeumensis gen. nov., sp. nov. and Nibrella viscosa sp. nov. are proposed. The type strain of Nibrella saemangeumensis is GCR0103(T) (â=âKACC 16453(T)â=âJCM 17927(T)) and the type strain of Nibrella viscosa is GYR3121(T) (â=âKACC 16447(T)â=âJCM 17925(T)).
Assuntos
Cytophagaceae/classificação , Filogenia , Água do Mar/microbiologia , Técnicas de Tipagem Bacteriana , Composição de Bases , Cytophagaceae/genética , Cytophagaceae/isolamento & purificação , DNA Bacteriano/genética , Ácidos Graxos/química , Dados de Sequência Molecular , Fosfatidiletanolaminas/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Espermidina/química , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMO
Two Gram-reaction-negative, rod-shaped, non-motile and red-pink-pigmented bacterial strains, designated GYR3077(T) and GSR0100(T), were isolated from a water sample of the Mangyung estuary enclosed by the Saemangeum Embankment in JEOLlabuk-do, South Korea, and were characterized using a polyphasic approach. 16S rRNA genes of strains GYR3077(T) and GSR0100(T) exhibited sequence similarities of 95.9â% to Hymenobacter deserti ZLB-3(T) and 96.6â% to Hymenobacter soli PB17(T), respectively, and indicated that these isolates belonged to the phylum Bacteroidetes. The major cellular fatty acids present in the two isolates were iso-C15â:â0, C16â:â1ω5c, summed feature 4 (iso-C17â:â1 I and/or anteiso-C17â:â1 B) and summed feature 3 (C16â:â1ω7c and/or C16â:â1ω6c). The major respiratory quinone and polyamine patterns were menaquinone-7 and sym-homospermidine, characteristic of the genus Hymenobacter. Flexirubin-type pigments were absent in both strains. The DNA G+C contents of strains GYR3077(T) and GSR0100(T) were 60.2 mol% and 61.9 mol%, respectively. The major polar lipid of strains GYR3077(T) and GSR0100(T) was phosphatidylethanolamine. Based on the morphological and physiological properties, strains GYR3077(T) and GSR0100(T) were considered to represent two novel species of the genus Hymenobacter, for which the names Hymenobacter koreensis sp. nov. (type strain GYR3077(T)â=âKACC 16451(T)â=âJCM 17924(T)) and Hymenobacter saemangeumensis sp. nov. (type strain GSR0100(T)â=âKACC 16452(T)â=âJCM 17923(T)) are proposed.
Assuntos
Cytophagaceae/classificação , Estuários , Filogenia , Água do Mar/microbiologia , Técnicas de Tipagem Bacteriana , Composição de Bases , Cytophagaceae/genética , Cytophagaceae/isolamento & purificação , DNA Bacteriano/genética , Ácidos Graxos/química , Dados de Sequência Molecular , Fosfatidiletanolaminas/química , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Espermidina/análogos & derivados , Espermidina/química , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMO
A taxonomic study was carried out on a novel bacterial strain, designated AM1R11(T), which was isolated from seawater of Jeju Island in Korea. Cells of the isolate were found to be Gram-negative, rod-shaped and non-motile. Comparison of the 16S rRNA gene sequences indicated that the isolate belonged to the family Cytophagaceae, with Dyadobacter ginsengisoli Gsoil 043(T) as its closest relative, with a similarity of 96.6â%. It contained summed feature 3 (comprising C16â:â1ω7c and/or C16â:â1ω6c, 36.9â%), iso-C15â:â0 (16.5â%) and C16â:â1ω5c (16.3â%) as the major fatty acids and MK-7 as the predominant menaquinone. The polar lipid profile of strain AM1R11(T) revealed the presence of phosphatidylethanolamine, one aminolipid and four unidentified lipids (L1, L2, L3 and L4). The DNA G+C content of strain AM1R11(T) was 45.1 mol%. On the basis of the evidence presented, it is concluded that strain AM1R11(T) represents a novel species of the genus Dyadobacter, for which the name Dyadobacter jejuensis sp. nov. is proposed. The type strain is AM1R11(T) (â=âKACC 16446(T)â=âJCM 17918(T)).
Assuntos
Flavobacteriaceae/classificação , Filogenia , Água do Mar/microbiologia , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/análise , Flavobacteriaceae/genética , Flavobacteriaceae/isolamento & purificação , Dados de Sequência Molecular , Fosfatidiletanolaminas/análise , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Vitamina K 2/análogos & derivados , Vitamina K 2/análiseRESUMO
A gram-negative, rod-shaped, non-motile and pink bacterial strain, designated strain GCM0142(T), was isolated from the confined seawater in the Saemangeum Tide Embankment of South Korea, and characterized using a polyphasic approach. 16S rRNA gene sequence analysis of strain GCM0142(T) indicated that the isolate belonged to the phylum Bacteroidetes and exhibited similarity levels of 94.0-96.4â% to the type strains of recognized Pontibacter species. Strain GCM0142(T) was oxidase- and catalase-positive. The major cellular fatty acids of the novel strain were summed feature 4 (comprising iso-C(17â:â1)I and/or anteiso-C(17â:â1)B, 36.8â%), iso-C(15â:â0) (22.3â%) and summed feature 3 (comprising C(16â:â1)ω7c and/or C(16â:â1)ω6c, 6.2â%). The DNA G+C content of strain GCM0142(T) was 48.9 mol% and the major quinone was MK-7. The polar lipid profile consisted of phosphatidylethanolamine, two unknown aminolipids (AL1-2), an unknown aminophospholipid, five unknown lipids (L1-5) and an unknown glycolipid. On the basis of the evidence presented, strain GCM0142(T) is considered to represent a novel species of the genus Pontibacter, for which the name Pontibacter saemangeumensis sp. nov. is proposed. The type strain is GCM0142(T) (â=âKACC 16448(T)â=âJCM 17926(T)).
Assuntos
Bacteroidetes/classificação , Filogenia , Água do Mar/microbiologia , Técnicas de Tipagem Bacteriana , Bacteroidetes/genética , Bacteroidetes/isolamento & purificação , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/análise , Dados de Sequência Molecular , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Vitamina K 2/análogos & derivados , Vitamina K 2/análiseRESUMO
The veA gene is one of the key genes in regulating sexual development of Aspergillus nidulans. During the study on the veA gene, it was observed that the veA expression level is slightly higher in a veA1 mutant than in a wild type at 37 degrees C, suggesting that the wild type veA gene is necessary for the negative regulation of the veA expression. In the veA1 mutant, the veA expression was higher than in a wild type grown at 42 degrees C but equal at 30 degrees C. Furthermore, in a veA deletion mutant having its own promoter and the N-terminus of the VeA ORF, expression of the N-terminus by the veA promoter was highly up-regulated, supporting the possibility that the veA gene is important for the negative regulation of the veA expression. Analyses of the lacZ transcript and the beta-galactosidase activity from the reporter strains in the veA1 background, which were constructed by transformation of the lacZ reporter plasmids containing the lacZ gene under the control of the intact or the truncated veA promoters from the -943 to +262 bp region, showed that the truncated promoters produced more veA transcript and higher beta-galactosidase activity than the intact one at 30 degrees C, but equal at 42 degrees C. In addition, the serial-deletion analysis of the veA promoter identified a crucial region in the promoter from -943 to -740 bp for this derepression of the veA expression. Taken together, these results indicated that the veA gene is necessary for the negative regulation of the veA expression. Moreover, the veA expression was derepressed in the light-illuminated condition, where the VeA protein is hardly transported into the nucleus.
Assuntos
Aspergillus nidulans/genética , Aspergillus nidulans/metabolismo , Regulação Fúngica da Expressão Gênica , Genes Fúngicos , Sequência de Bases , Deleção de Genes , Genes Reporter , Óperon Lac/genética , Luz , Dados de Sequência Molecular , Mutação , Fases de Leitura Aberta , Plasmídeos , Regiões Promotoras Genéticas , Transcrição Gênica , beta-Galactosidase/análise , beta-Galactosidase/metabolismoRESUMO
The esdC (early sexual development) gene was isolated by using an expressed sequence tag (EST) as a probe from a genomic library of the early sexual developmental stage mycelia of Aspergillus nidulans. The sequence analysis revealed that the esdC gene contains a 59bp intron and encodes a 266 amino acid polypeptide with a calculated molecular weight of 29.4kDa. The EsdC protein is conserved among filamentous fungi and has a domain with similarity to a glycogen binding domain conserved in the beta subunit of the AMP-activated protein kinase (AMPK) complex. Although the esdD gene was expressed during asexual development, the expression reached its maximum at 10h and decreased thereafter up to 50h after the end of the induction of sexual development. In an esdC-null mutant under a veA(+) background, no sexual structures were formed at any condition examined. However, esdC overexpression did not lead to an induction of sexual development. In addition, to the effect of the esdC mutation on the sexual development, more conidiophores were formed in the esdC-null mutant than in a wild type. These results indicate that the esdC gene is necessary for sexual structure formation but its overexpression is not sufficient to enhance this process. Expression of the esdC gene throughout development was positively regulated by the veA gene. In addition, very little and no esdC transcript, respectively, was observed in an flbA-null mutant and in a fadA(G42R) mutant, and the esdC transcript level was higher in a fadA-null mutant and in a sfaD-null mutant than in a wild type, indicating that inactivation of FadA is necessary for positive regulation of esdC expression.
Assuntos
Aspergillus nidulans/genética , Proteínas Fúngicas/genética , Proteínas Heterotriméricas de Ligação ao GTP/genética , Sequência de Aminoácidos , Aspergillus nidulans/crescimento & desenvolvimento , Sítios de Ligação/genética , Proteínas Fúngicas/fisiologia , Regulação da Expressão Gênica no Desenvolvimento , Regulação Fúngica da Expressão Gênica , Proteínas Heterotriméricas de Ligação ao GTP/fisiologia , Íntrons/genética , Dados de Sequência Molecular , Mutação , Homologia de Sequência de AminoácidosRESUMO
A Gram-negative, facultative anaerobic, rod-shaped, motile by means of a polar flagellum, greenish-yellow-pigmented bacterial strain (designated strain JJ3220T) was isolated from an artificial lake in South Korea and characterized using a polyphasic approach. The 16S rRNA gene sequence of strain JJ3220T indicated that the isolate belongs to the family Rhodocyclaceae, and that it exhibits 96.4% similarity to Uliginosibacterium paludis KBP-13T. The major cellular fatty acids of the novel strain were C14:0, C16:0, and summed feature 3 (C16:1 ω6c and/or C16:1 ω7c). Strain JJ3220T had flexirubin-type pigments. The DNA G+C content of the strain was 62.8%. The major respiratory quinone and major polar lipid of strain JJ3220T were ubiquinone-8 and phosphatidylethanolamine, respectively. Based on the morphological and physiological properties and biochemical evidence presented, it can be concluded that strain JJ3220T represents a novel species of the genus Uliginosibacterium. The type strain Uliginosibacterium flavum is JJ3220T (=KACC 17644T =JCM 19465T).
Assuntos
Betaproteobacteria/classificação , Betaproteobacteria/isolamento & purificação , Lagos/microbiologia , Anaerobiose , Técnicas de Tipagem Bacteriana , Composição de Bases , Betaproteobacteria/genética , Betaproteobacteria/fisiologia , Análise por Conglomerados , Citosol/química , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Ácidos Graxos/análise , Locomoção , Fosfolipídeos/análise , Filogenia , Pigmentos Biológicos/análise , Quinonas/análise , RNA Ribossômico 16S/genética , Análise de Sequência de DNARESUMO
A Gram stain-negative, yellowish green-pigmented, facultatively anaerobic, motile, curved rod-shaped bacterium designated as strain JJ016T was isolated from an artificial lake in South Korea, and characterized using a polyphasic approach. The 16S rRNA gene sequence of strain JJ016T indicated that the isolate belonged to the family Rhodocyclaceae and exhibited 95.0% identity to Uliginosibacterium gangwonense 5YN10-9T. The major cellular fatty acids of the novel strain were summed feature 3 (C16:1 ω6c and/or C16:1 ω7c), C16:0, C14:0, and summed feature 8 (C18:1 ω7c and/or C18:1 ω6c). The DNA G+C content of strain JJ016T was 61.9 mol%. The major respiratory quinone and major polar lipid of strain JJ016T were ubiquinone-8 and phosphatidylethanolamine, respectively. Based on the morphological and physiological properties and the biochemical evidence presented, we concluded that strain JJ016T represents a novel species of a new genus in the family Rhodocyclaceae, for which the name Viridibacterium curvum gen. nov., sp. nov. is proposed. The type strain is JJ016T (=KACC 16899T =JCM 18715T).
Assuntos
Água Doce/microbiologia , Filogenia , Rhodocyclaceae/classificação , Rhodocyclaceae/isolamento & purificação , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/análise , DNA Bacteriano/genética , Ácidos Graxos/análise , Fosfolipídeos/análise , RNA Ribossômico 16S/genética , República da Coreia , Rhodocyclaceae/genética , Rhodocyclaceae/fisiologia , Análise de Sequência de DNARESUMO
The wettability of electrospun poly(epsilon-caprolactone) (PCL) mats was improved by co-electrospinning with poly(vinyl alcohol) (PVA), by double-spinneret electrospinning method. The improved hydrophilicity of the hybrid PCL/PVA mats was confirmed by water contact angle measurement. The in vitro cell attachment on the hydrophobic PCL and hydrophilically modified PCL/PVA mats was compared by culture studies using human prostate epithelial cells (HPECs). The stability of water-soluble PVA component in the electrospun PCL/PVA mats was checked by thermogravimetric analysis and intensity of fluorescence material after immersion in water for 7 days. The images from scanning electron microscopy, field emission scanning electron microscopy, and optical microscopy showed that the attachment and proliferation rate of HPECs were improved by introducing PVA into the electrospun PCL mats.
Assuntos
Materiais Revestidos Biocompatíveis , Células Epiteliais , Teste de Materiais , Poliésteres , Álcool de Polivinil , Próstata , Adesão Celular , Proliferação de Células , Células Cultivadas , Materiais Revestidos Biocompatíveis/química , Células Epiteliais/ultraestrutura , Humanos , Masculino , Microscopia Eletrônica de Varredura , Poliésteres/química , Álcool de Polivinil/química , Próstata/ultraestrutura , MolhabilidadeRESUMO
We isolated the ganB gene encoding the Galpha-protein homolog from Aspergillus nidulans. To investigate the cellular function of GanB, various mutant strains were isolated. Deletion of constitutively inactive ganB mutants showed conidiation and derepressed brlA expression in a submerged culture. Constitutive activation of GanB caused a reduction in hyphal growth and a severe defect in asexual sporulation. We therefore propose that GanB may negatively regulate asexual sporulation through the BrlA pathway. In addition, deletion or constitutive inactivation of GanB reduced germination rate while constitutive activation led to precocious germination. Furthermore, conidia of a constitutively active mutant could germinate even without carbon source. Taken together, these results indicated that GanB plays a positive role during germination, possibly through carbon source sensing, and negatively regulates asexual conidiation in A. nidulans.
Assuntos
Aspergillus nidulans/genética , Subunidades alfa de Proteínas de Ligação ao GTP/genética , Expressão Gênica , Reprodução Assexuada/genética , Esporos/fisiologia , Sequência de Aminoácidos , Aspergillus nidulans/crescimento & desenvolvimento , Sequência de Bases , Primers do DNA , Subunidades alfa de Proteínas de Ligação ao GTP/metabolismo , Genótipo , Dados de Sequência Molecular , Mutação/genética , Análise de Sequência de DNA , Transdução de Sinais/genética , Especificidade da Espécie , Esporos/genética , Transformação GenéticaRESUMO
The antimicrobial killing activity toward methicillin-resistant Staphylococcus aureus (MRSA) has been a serious emerging global issue. In a continuing search for compounds with antibacterial activity against several microorganisms including S. aureus and MRSA, an n-hexane extract of Magnolia officinalis was found to contain magnolol. This compound exhibited potent activity against S. aureus, standard methicillin-susceptible S. aureus (MSSA), and MRSA as well as clinical MRSA isolates. When combined with oxacillin, the antibacterial activities of magnolol and honokiol against the MRSA strain were increased compared to single treatment without antibiotics at 10 µg/mL and 25 µg/mL, respectively. These activities of magnolol and honokiol were dose dependent. Also, magnolol showed synergistic effects with oxacillin against 13 clinical isolates of MRSA. It was determined that magnolol and honokiol had a synergistic effect with oxacillin against MRSA strain. Furthermore, the magnolol inhibited the expression of the resistant genes, mecA, mecI, femA, and femB, in mRNA. We concluded that the antibacterial activity of magnolol against MRSA strain is more related to the mecI's pathway and components of the cell wall than mecR1. Therefore, the results obtained in this study suggest that the combination of magnolol and antibiotics could lead to the development of new combination antibiotics against MRSA infection.