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1.
PLoS Biol ; 21(8): e3002251, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37607211

RESUMO

Modern advances in DNA sequencing hold the promise of facilitating descriptions of new organisms at ever finer precision but have come with challenges as the major Codes of bionomenclature contain poorly defined requirements for species and subspecies diagnoses (henceforth, species diagnoses), which is particularly problematic for DNA-based taxonomy. We, the commissioners of the International Commission on Zoological Nomenclature, advocate a tightening of the definition of "species diagnosis" in future editions of Codes of bionomenclature, for example, through the introduction of requirements for specific information on the character states of differentiating traits in comparison with similar species. Such new provisions would enhance taxonomic standards and ensure that all diagnoses, including DNA-based ones, contain adequate taxonomic context. Our recommendations are intended to spur discussion among biologists, as broad community consensus is critical ahead of the implementation of new editions of the International Code of Zoological Nomenclature and other Codes of bionomenclature.


Assuntos
DNA , DNA/genética , Fenótipo , Análise de Sequência de DNA
2.
Mol Phylogenet Evol ; 161: 107139, 2021 08.
Artigo em Inglês | MEDLINE | ID: mdl-33711445

RESUMO

Southeast Asia is one of the world's biodiversity hotspots, and the high level of diversity and endemism was reached by colonisation events as well as internal diversification. We investigate the phylogenetic relationships and biogeographic history of the loach genus Nemacheilus, which is widely distributed and common across freshwaters of Southeast Asia. In addition we present the ancestral range reconstruction of the related loach genus Pangio that commonly occurs in the same region as Nemacheilus. Our results reveal that the species currently classified as Nemacheilus in fact are a polyphyletic assemblage; most species are now retaining in a monophyletic Nemacheilus sensu stricto and five species belong to different lineages. We further indicate the existence of hidden diversity within Nemacheilus in the form of several undescribed species. Three major clades (Selangoricus, Masyae and Ornatus) are found within the genus Nemacheilus sensu stricto. These clades generally correspond to the species groups formerly defined on the basis of their pigmentation pattern. The biogeographic analyses show that Nemacheilus most likely originated in mainland Southeast Asia and subsequently expanded in a southward direction to Borneo, Sumatra and Java and the southern Malay Peninsula. In contrast, the genus Pangio originated in Sundaland, from where it extended several times northwards into Indochina and to northern India. Our results demonstrate that small freshwater fishes with restricted dispersal ability are very helpful for the reconstruction of biogeographic history. The contrasting biogeographic history of these two groups of small, benthic and related fish show how complex and case-specific the processes that lead to the biodiversity richness of Southeast Asia are.


Assuntos
Cipriniformes/classificação , Cipriniformes/genética , Água Doce , Filogenia , Filogeografia , Animais , Sudeste Asiático
3.
Zootaxa ; 3681: 281-5, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-25232609

RESUMO

The publication dates of the 36 livraisons of Bleeker's Atlas ichthyologique des Indes orientales néêrlandaises (1862-1878) are here compiled from reports of the books received by the Royal Academy of Sciences in Amsterdam that were published as supplements to the Verslagen en Mededeelingen der Koninklijke Akademie van Wetenschappen, Afdeeling Natuurkunde. While the dates of livraisons 1-18 were already known with some accuracy, only the publication year was known for livraisons 19-36. The dates are now narrowed to within a month. This source also shows that Poissons de Madagascar was published in December 1874 at the latest.


Assuntos
Livros/história , Peixes/classificação , Editoração/história , Animais , História do Século XIX , Tempo
4.
Zootaxa ; 3640: 479-82, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-26000430

RESUMO

Cyclocheilichthys is the valid name for the genus that includes Barbus apogon Valenciennes. Cyclocheilichthys has precedence over Anematichthys, which is a simultaneous objective synonym. If C. enoplos is considered not to be congeneric with C. apogon, the valid name for a genus that includes it is Cyclocheilos.


Assuntos
Cyprinidae/classificação , Animais , Filogenia
5.
Zootaxa ; 3637: 308-24, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-26046199

RESUMO

Two new species of Squalius are described from the Seyhan River drainage in Turkey: S. adanaensis from the lower part of the drainage and S. seyhanensis from the upper part. Squalius adanaensis is distinguished from the other species of the genus in Anatolia, among other characters, by having the flank scales with a dark spot on each scale pocket but covered by the posterior margin of the previous scale, and very few melanophores along the posterior margin; 38-42 + 1-2 lateral line scales; and a maximum known size of 157 mm SL. Squalius seyhanensis is distinguished from other species of the genus in Anatolia, among other characters, by having the flank scales with a dark spot on each scale pocket, exposed, and densely-set melanophores along the posterior margin, forming a conspicuous reticulate pattern; 42-44 + 1-2 lateral line scales; and a maximum know size of 240 mm SL.


Assuntos
Cyprinidae/classificação , Distribuição Animal , Estruturas Animais/anatomia & histologia , Estruturas Animais/crescimento & desenvolvimento , Animais , Tamanho Corporal , Cyprinidae/anatomia & histologia , Cyprinidae/crescimento & desenvolvimento , Ecossistema , Feminino , Masculino , Turquia
6.
Zootaxa ; 3635: 62-70, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-26097931

RESUMO

Rasbora dusonensis, R. tornieri and R. myersi are valid species. Rasbora dusonensis sensu Brittan (1954) is R. tornieri and R. dusonensis sensu Kottelat (1991) is R. myersi. Both R. dusonensis and R. tornieri are members of the R. argyrotaenia group and can be distinguished from congeners in having a broad, dark, sharply-defined midlateral stripe on body extending from opercle to caudal-fin base and separated from the dark dorsum by a highly contrasting light longitudinal area; 12-14 predorsal scales; the dorsohypural distance equal to or slightly less than the distance between the dorsal-fin origin and the posterior orbital margin and 14 circumpeduncular scale rows. The two species differ from each other by the color and color pattern on the caudal fin, and caudal peduncle depth.


Assuntos
Cyprinidae/anatomia & histologia , Cyprinidae/classificação , Animais , Cyprinidae/fisiologia , Especificidade da Espécie
7.
Zootaxa ; 3630: 308-16, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-26131513

RESUMO

We resolve the identity of the glass catfish, a species of Asian freshwater fish commonly encountered as an ornamental fish and an experimental subject that has long been misidentified as either Kryptopterus bicirrhis or K. minor. Our study indicates that the glass catfish is an unnamed species distinct from either, which we describe here as Kryptopterus vitreolus. Kryptopterus vitreolus is known from river drainages in peninsular and southeastern Thailand, and is distinguished from congeners in having a combination of: transparent body in life, maxillary barbels reaching beyond the base of the first anal-fin, dorsal profile with a pronounced nuchal concavity, snout length 29-35% head length (HL), eye diameter 28-34% HL, slender body (depth at anus 16-20% standard length (SL)) and caudal peduncle (depth 4-7% SL), 14-18 rakers on the first gill arch, and 48-55 anal-fin rays.


Assuntos
Peixes-Gato/classificação , Distribuição Animal , Estruturas Animais/anatomia & histologia , Estruturas Animais/crescimento & desenvolvimento , Animais , Tamanho Corporal , Peixes-Gato/anatomia & histologia , Peixes-Gato/crescimento & desenvolvimento , Feminino , Masculino , Tamanho do Órgão , Tailândia
8.
Sci Rep ; 13(1): 16996, 2023 10 09.
Artigo em Inglês | MEDLINE | ID: mdl-37813885

RESUMO

To approach the taxonomy of large and complex animal groups it is of advantage to focus on species groups with shared derived character state. We investigate the composition, morphological characteristics and relationships of and within the Schistura cincticauda species group, whose members are small freshwater fishes that inhabit streams and rivers in eastern Myanmar and western and southern Thailand. A phylogenetic analysis using molecular genetic markers demonstrated the monophyly of this group; a combined genetic and morphological analysis revealed the inclusion of at least twelve species. They share the presence of a pair of black marks on the lower lip, one on each side of the median interruption (these marks may be reduced to few melanophores or even missing in some individuals). Additionally, all species share a small body size (max. 60 mm SL), an incomplete lateral line reaching at most to vertical through anal-fin base, and the absence of sexual dimorphism. Each of the 12 species is diagnosed by a unique combination of character states in fin ray numbers, anus position, presence/absence of an axillary pelvic lobe, and colour pattern. The distribution areas of several species overlap and five cases of syntopic occurrence are known. Five unnamed species are described herein.


Assuntos
Cipriniformes , Humanos , Animais , Filogenia , Rios , Tamanho Corporal , Caracteres Sexuais
9.
Zootaxa ; 5129(1): 92-104, 2022 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-36101148

RESUMO

Nemacheilus pezidion, new species, is described from the Xe Kong watershed, Mekong drainage, in Attapeu province, southern Laos. It is distinguished from all other Nemacheilidae in Southeast Asia by its unique colour pattern consisting of a black midlateral stripe and a middorsal row of 1115 narrow saddles. Besides, the male has a globulous suborbital flap with tubercles along its posterior edge, and the pectoral fin with thickened anterior rays, and branched rays 14 and unculiferous pads behind them covered by small tubercles. It was found in habitats with moderate flow, on mud to gravel bottom. Nemacheilus pezidion was earlier misidentified as N. longistriatus.


Assuntos
Cipriniformes/classificação , Nadadeiras de Animais/anatomia & histologia , Animais , Cipriniformes/anatomia & histologia , Ecossistema , Laos , Masculino , Rios , Movimentos da Água
10.
Zootaxa ; 5138(2): 185-190, 2022 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-36101027

RESUMO

Silurichthys exortivus, a new species of silurid catfish, is described from the Mahakam River drainage in eastern Borneo. The new species can be distinguished from congeners in lacking a dorsal fin, having 4 (vs. 67) principal rays on the upper caudal-fin lobe and a combination of: body depth at anus 14.0% SL, caudal peduncle depth 5.1% SL, pelvic fins absent, 54 anal-fin rays, caudal fin with asymmetrical lobes (upper lobe 1.1 times longer than lower), 48 vertebrae, 1 gill raker on the first branchial arch, and a mottled brown body. Based on the reduced number of principal caudal-fin rays, S. exortivus, S. ligneolus and S. sanguineus are hypothesized to form an exclusively Bornean clade.


Assuntos
Peixes-Gato , Distribuição Animal , Animais , Bornéu , Indonésia , Rios
11.
Zootaxa ; 5150(1): 43-64, 2022 Jun 03.
Artigo em Inglês | MEDLINE | ID: mdl-36095761

RESUMO

The taxonomic status of the resident and anadromous trout species native to the Kura and Aras river drainages is evaluated, and three resident species are recognised in the upper reaches of Kura and Aras drainages in Turkey. Salmo murathani, new species, is described from slow flowing tributaries of the Aras River. It is distinguished by the general body color dark greyish in life; the numerous black spots on body, present on the back and on the middle and upper parts of the flank, and on the anterior part of the lower flank in males and females larger than about 230 mm SL; the number of black spots increases with size, in both males and females; and various meristic and morphometric characters. Salmo araxensis, new species, is described from fast flowing tributaries of the Aras River. It is distinguished by the general body color greyish to brownish in life; only few black spots on the body, restricted to the back and the upper part of the flank, their number not increasing with size in both sexes; and various meristic and morphometric characters. Salmo ardahanensis, new species, is described from head waters of the Kura River. It is distinguished by the general body color dark brownish in life; the roundish black spots on the body, scattered on the back, and the middle and upper parts of the flank in most specimens, rarely restricted to the back and the upper part of the flank; in females, the black spots are few, restricted to the back and the upper part of the flank; the number of black spots increases slightly with size in males; the adipose fin is large, almost reaching to caudal-fin base in males larger than about 170 mm SL; and various meristic and morphometric characters.


Assuntos
Rios , Salmonidae , Animais , Feminino , Masculino , Truta , Turquia
12.
Zootaxa ; 4933(2): zootaxa.4933.2.6, 2021 Feb 19.
Artigo em Inglês | MEDLINE | ID: mdl-33756799

RESUMO

'Nemacheilus' argyrogaster, new species, is described from the Xe Kong, Mekong drainage, in Attapeu and Xe Kong provinces, southern Laos. It is distinguished from all other Nemacheilidae in Southeast Asia by its unique colour pattern made of a bold black midlateral stripe separating the yellowish brown dorsal part of the body from the silvery whitish ventral part and a middorsal row of 14-19 thin saddles. Besides, the male has a globulous suborbital flap with tubercles along its free, posterior edge, and the pectoral fin with thickened anterior ray and branched rays 1-4 and unculiferous pads behind them covered by small tubercles; lips thin, lower lip continuous with a narrow median notch. It was found in moderate to fast flowing water, over pebble to stone bottom. 'Nemacheilus' argyrogaster, was earlier misidentified as N. longistriatus; it is provisionally placed in the genus Nemacheilus.


Assuntos
Cipriniformes , Animais , Cor , Laos , Masculino , Rios
13.
Zootaxa ; 4926(1): zootaxa.4926.1.9, 2021 Feb 04.
Artigo em Inglês | MEDLINE | ID: mdl-33756764

RESUMO

Bagarius vegrandis, new species, is described from the Chao Phraya and Mekong river drainages. It differs from congeners in having a small maximum body size (to 220 mm SL vs. 520-1400 mm SL) and the adipose-fin origin markedly posterior to (vs. at vertical through or very slightly posterior to) the anal-fin origin. It further differs from congeners in having the following unique combination of characters: ovoid unculiferous plaques on dorsal surface of head, lateral margin of frontal not significantly deflected dorsally, eye diameter 11-15% HL, interorbital distance 23-28% HL, head width 18.3-22.3% SL, head depth 11.1-14.1% SL, filamentous extensions to first pectoral-fin element reaching to anus, dorsal spine width 10.6-13.9 times in its length, body depth at anus 8.7-12.0% SL, neural spines of the 4-6 vertebrae immediately anterior to adipose fin distally flattened but not forming series of prominent bumps along dorsal midline, length of adipose-fin base 10.8-13.0% SL, caudal-peduncle length 19.0-22.4% SL, caudal-peduncle depth 3.2-4.2% SL, 19-20 preanal vertebrae, and 39-40 total vertebrae. Bagarius bagarius (Hamilton, 1822) is demonstrated to be a species restricted to the Indian subcontinent (with Bagrus yarrelli Sykes, 1839, Pimelodus platespogon Valenciennes, in Jacquemont, 1839 and Pimelodus carnaticus Jerdon, 1849 as junior subjective synonyms) and Bagarius lica Volz, 1903 resurrected from synonymy with B. yarrelli as a valid species from Southeast Asia.


Assuntos
Peixes-Gato , Distribuição Animal , Animais , Tamanho Corporal , Indochina , Rios
14.
Zootaxa ; 4996(2): 322-330, 2021 Jul 05.
Artigo em Inglês | MEDLINE | ID: mdl-34810528

RESUMO

Pseudobagarius eustictus, new species, is described from the Nam Heung drainage (a tributary of the Mekong River) in northern Laos. It is distinguished from congeners in having a unique combination of the following characters: a weakly-produced snout in which the upper jaw extends only slightly beyond the margin of the lower jaw when viewed ventrally, 3 tubercles on the posterior margin of the pectoral spine, eye diameter 8% HL, head width 24.1% SL, dark yellow dorsal and lateral surfaces of the head, pectoral spine lacking elongate extensions, pectoral fin reaching the pelvic-fin base when adpressed against the body, dorsolateral surfaces of body without longitudinal series of prominent tubercles, body depth at anus 13.7% SL, length of adipose-fin base 17.7% SL, caudal-peduncle depth 7.0% SL, and 33 vertebrae.


Assuntos
Peixes-Gato , Distribuição Animal , Animais , Laos , Rios
15.
Zootaxa ; 4949(2): zootaxa.4949.2.12, 2021 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-33903352

RESUMO

Originally described as Muraena alba by the Russian ichthyologist Basilius Zuiew (1793) [Vasilij Fyodorovich Zuev'], the name Monopterus albus has long been used for a species of swamp eel (Synbranchidae) with a reportedly widespread occurrence in Asia (Rosen Greenwood 1976, Kottelat 2013). In recent years molecular studies have shown that Monopterus albus of authors is a species complex and several authors have recommended that up to three (Collins et al. 2002, Matsumoto et al. 2010, Kottelat 2013, Nico et al. 2019) or even five (Arisuryanti 2016) different species can be recognized. Kottelat (2013) referred to the eastern Asian clade of Matsumoto et al. (2010) as Monopterus albus and the Southeast Asian clade as Monopterus javanensis La Cepède, 1800, noting that no name is available for the clade on the Ryukyu Islands.


Assuntos
Smegmamorpha , Animais , Enguias , Smegmamorpha/classificação , Smegmamorpha/fisiologia
16.
Zootaxa ; 4763(2): zootaxa.4763.2.12, 2020 Apr 09.
Artigo em Inglês | MEDLINE | ID: mdl-33056874

RESUMO

Richardson (1848) described Aperioptus pictorius based on two syntypes from "Borneo". The description is based partly on a drawing of the whole fish and a close-up of its mouth parts (Fig. 1b). Richardson explained that at the time of writing the description, he no longer had access to the specimens: he had given them to the artist, after having examined them cursorily. After having made the first sketch, the artist placed them in water to have the fins expanded, then forgot about them when he threw out the water, and they were lost. The whole description reads: "The general aspect of the fish is that of a slender Galaxias, but there are no teeth on the jaws. The orifice of the mouth is a narrow vertical oval, which is restricted on the sides by membranous processes. The figure is of the natural size [about 65 mm SL]. Hab. Borneo". He also indicated:.


Assuntos
Cipriniformes , Osmeriformes , Nadadeiras de Animais , Animais , Masculino
17.
Zootaxa ; 4612(2): zootaxa.4612.2.1, 2019 May 29.
Artigo em Inglês | MEDLINE | ID: mdl-31717063

RESUMO

Rhyacoschistura, new genus, belongs to a group of genera (Physoschistura, Mustura, Pteronemacheilus, Petruichthys) characterised by the modified branched pectoral-fin rays of males, with a very thick first ray, usually without membranes between some of the branches and/or rays, and anterior rays and/or membranes covered by small tubercles at maturity. Rhyacoschistura is distinguished from them by the combination of: presence of a suborbital flap; emarginate caudal fin; lower lip with a wide median interruption and connected to isthmus by a frenum; body depth about equal from behind head to caudal-fin base. Rhyacoschistura larreci, new species, is described from the Mekong drainage in Xayaburi Province, Laos. It is distinguished by details of the morphology of the pelvic fin, and its colour pattern (flank with numerous narrow slanted bars, very irregularly organised and shaped, more or less connected, or sometimes covering the whole flank). Schistura suber, from Nam Ngum watershed, is redescribed on the basis of adults and placed in Rhyacoschistura.


Assuntos
Cipriniformes , Animais , Cor , , Laos , Masculino
19.
BMC Evol Biol ; 7: 38, 2007 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-17355618

RESUMO

BACKGROUND: Paedocypris, a highly developmentally truncated fish from peat swamp forests in Southeast Asia, comprises the world's smallest vertebrate. Although clearly a cyprinid fish, a hypothesis about its phylogenetic position among the subfamilies of this largest teleost family, with over 2400 species, does not exist. Here we present a phylogenetic analyses of 227 cypriniform taxa, including 213 cyprinids, based upon complete mitochondrial DNA cytochrome b nucleotide sequences in order to determine the phylogenetic position of Paedocypris and to study the evolution of miniaturization among cyprinids. RESULTS: Our analyses reveal a strongly supported sister group relationship (clade C) between Paedocypris and Sundadanio, another developmentally truncated miniature cyprinid. Clade C was resolved as sister group of a larger clade characterized by small rasborine taxa (clade D). We found that miniaturised taxa are more numerous in the rasborine clade A, formed by clades C and D, than in any other cyprinid clade. The consensus cytb in cyprinids includes 380 amino acids and an incomplete T-- stop codon. We noted that a few cyprinids mostly rasborine taxa placed within clade A had either a TAA or TAG stop codon, 376, 378, or 381 amino acids, and up to 10 base pairs (bp) of noncoding region before the 5' end of the tRNA-Thr. Our relaxed molecular clock estimates revealed high divergence times for the Sundadanio and Paedocypris clades and provide a first temporal framework for the evolution of miniaturization among cyprinids. CONCLUSION: Paedocypris belongs to a clade (Rasborinae clade A) that shows recurrent miniaturization, including both taxa characterized by developmental truncation and by proportioned dwarfism. Its closest relative is another miniaturized taxon, the genus Sundadanio. We conclude that the miniaturized cyprinids with remarkable morphological novelties, like Paedocypris and Danionella, are at the same time the most developmentally truncated taxa. The miniaturized cyprinids with no or few developmental truncations like Boraras, Microrasbora, and Horadandia show no such evolutionary novelties.


Assuntos
Cyprinidae/genética , Evolução Molecular , Filogenia , Animais , Sequência de Bases , Tamanho Corporal , Cyprinidae/anatomia & histologia , Cyprinidae/classificação , Citocromos b/genética , Primers do DNA , Variação Genética , Dados de Sequência Molecular , Alinhamento de Sequência
20.
Zootaxa ; 4254(4): 493-499, 2017 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-28609956

RESUMO

Speolabeo, new genus, is established for Bangana musaei, a fish from caves in the Khammouan Karst in Laos. It was originally tentatively placed in the genus Bangana s.l. Besides characters related to hypogean life (absence of eyes, absence of pigment resulting in a whitish body), it is distinguished from all species of Bangana s.l. in having only 7-8½ branched dorsal-fin rays, the pelvic-fin at the vertical between the first unbranched and first branched dorsal-fin rays, and details of mouth morphology.


Assuntos
Cyprinidae , Estruturas Animais , Animais , Cavernas , Trato Gastrointestinal , Laos
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