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1.
Surg Endosc ; 37(6): 4754-4765, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-36897405

RESUMO

BACKGROUND: We previously developed grading metrics for quantitative performance measurement for simulated endoscopic sleeve gastroplasty (ESG) to create a scalar reference to classify subjects into experts and novices. In this work, we used synthetic data generation and expanded our skill level analysis using machine learning techniques. METHODS: We used the synthetic data generation algorithm SMOTE to expand and balance our dataset of seven actual simulated ESG procedures using synthetic data. We performed optimization to seek optimum metrics to classify experts and novices by identifying the most critical and distinctive sub-tasks. We used support vector machine (SVM), AdaBoost, K-nearest neighbors (KNN) Kernel Fisher discriminant analysis (KFDA), random forest, and decision tree classifiers to classify surgeons as experts or novices after grading. Furthermore, we used an optimization model to create weights for each task and separate the clusters by maximizing the distance between the expert and novice scores. RESULTS: We split our dataset into a training set of 15 samples and a testing dataset of five samples. We put this dataset through six classifiers, SVM, KFDA, AdaBoost, KNN, random forest, and decision tree, resulting in 0.94, 0.94, 1.00, 1.00, 1.00, and 1.00 accuracy, respectively, for training and 1.00 accuracy for the testing results for SVM and AdaBoost. Our optimization model maximized the distance between the expert and novice groups from 2 to 53.72. CONCLUSION: This paper shows that feature reduction, in combination with classification algorithms such as SVM and KNN, can be used in tandem to classify endoscopists as experts or novices based on their results recorded using our grading metrics. Furthermore, this work introduces a non-linear constraint optimization to separate the two clusters and find the most important tasks using weights.


Assuntos
Gastroplastia , Humanos , Algoritmos , Aprendizado de Máquina , Algoritmo Florestas Aleatórias , Máquina de Vetores de Suporte
2.
Surg Endosc ; 37(2): 1282-1292, 2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-36180753

RESUMO

BACKGROUND: Assessing performance automatically in a virtual reality trainer or from recorded videos is advantageous but needs validated objective metrics. The purpose of this study is to obtain expert consensus and validate task-specific metrics developed for assessing performance in double-layered end-to-end anastomosis. MATERIALS AND METHODS: Subjects were recruited into expert (PGY 4-5, colorectal surgery residents, and attendings) and novice (PGY 1-3) groups. Weighted average scores of experts for each metric item, completion time, and the total scores computed using global and task-specific metrics were computed for assessment. RESULTS: A total of 43 expert surgeons rated our task-specific metric items with weighted averages ranging from 3.33 to 4.5 on a 5-point Likert scale. A total of 20 subjects (10 novices and 10 experts) participated in validation study. The novice group completed the task significantly more slowly than the experienced group (37.67 ± 7.09 vs 25.47 ± 7.82 min, p = 0.001). In addition, both the global rating scale (23.47 ± 4.28 vs 28.3 ± 3.85, p = 0.016) and the task-specific metrics showed a significant difference in performance between the two groups (38.77 ± 2.83 vs 42.58 ± 4.56 p = 0.027) following partial least-squares (PLS) regression. Furthermore, PLS regression showed that only two metric items (Stay suture tension and Tool handling) could reliably differentiate the performance between the groups (20.41 ± 2.42 vs 24.28 ± 4.09 vs, p = 0.037). CONCLUSIONS: Our study shows that our task-specific metrics have significant discriminant validity and can be used to evaluate the technical skills for this procedure.


Assuntos
Cirurgiões , Realidade Virtual , Humanos , Benchmarking , Anastomose Cirúrgica , Intestinos , Competência Clínica
3.
J Surg Res ; 252: 247-254, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32304931

RESUMO

BACKGROUND: Discriminating performance of learners with varying experience is essential to developing and validating a surgical simulator. For rare and emergent procedures such as cricothyrotomy (CCT), the criteria to establish such groups are unclear. This study is to investigate the impact of surgeons' actual CCT experience on their virtual reality simulator performance and to determine the minimum number of actual CCTs that significantly discriminates simulator scores. Our hypothesis is that surgeons who performed more actual CCT cases would perform better on a virtual reality CCT simulator. METHODS: 47 clinicians were recruited to participate in this study at the 2018 annual conference of the Society of American Gastrointestinal and Endoscopic Surgeons. We established groups based on three different experience thresholds, that is, the minimal number of CCT cases performed (1, 5, and 10), and compared simulator performance between these groups. RESULTS: Participants who had performed more clinical cases manifested higher mean scores in completing CCT simulation tasks, and those reporting at least 5 actual CCTs had significantly higher (P = 0.014) simulator scores than those who had performed fewer cases. Another interesting finding was that classifying participants based on experience level, that is, attendings, fellows, and residents, did not yield statistically significant differences in skills related to CCT. CONCLUSIONS: The simulator was sensitive to prior experience at a threshold of 5 actual CCTs performed.


Assuntos
Obstrução das Vias Respiratórias/cirurgia , Competência Clínica/estatística & dados numéricos , Tratamento de Emergência/métodos , Treinamento com Simulação de Alta Fidelidade/estatística & dados numéricos , Músculos Laríngeos/cirurgia , Adulto , Idoso , Idoso de 80 Anos ou mais , Tratamento de Emergência/estatística & dados numéricos , Feminino , Treinamento com Simulação de Alta Fidelidade/métodos , Humanos , Masculino , Pessoa de Meia-Idade , Cirurgiões/educação , Cirurgiões/estatística & dados numéricos , Realidade Virtual , Adulto Jovem
4.
BMC Pediatr ; 20(1): 557, 2020 12 14.
Artigo em Inglês | MEDLINE | ID: mdl-33317469

RESUMO

BACKGROUND: Previous research studies have demonstrated abnormalities in the metabolism of mothers of young children with autism. METHODS: Metabolic analysis was performed on blood samples from 30 mothers of young children with Autism Spectrum Disorder (ASD-M) and from 29 mothers of young typically-developing children (TD-M). Targeted metabolic analysis focusing on the folate one-carbon metabolism (FOCM) and the transsulfuration pathway (TS) as well as broad metabolic analysis were performed. Statistical analysis of the data involved both univariate and multivariate statistical methods. RESULTS: Univariate analysis revealed significant differences in 5 metabolites from the folate one-carbon metabolism and the transsulfuration pathway and differences in an additional 48 metabolites identified by broad metabolic analysis, including lower levels of many carnitine-conjugated molecules. Multivariate analysis with leave-one-out cross-validation allowed classification of samples as belonging to one of the two groups of mothers with 93% sensitivity and 97% specificity with five metabolites. Furthermore, each of these five metabolites correlated with 8-15 other metabolites indicating that there are five clusters of correlated metabolites. In fact, all but 5 of the 50 metabolites with the highest area under the receiver operating characteristic curve were associated with the five identified groups. Many of the abnormalities appear linked to low levels of folate, vitamin B12, and carnitine-conjugated molecules. CONCLUSIONS: Mothers of children with ASD have many significantly different metabolite levels compared to mothers of typically developing children at 2-5 years after birth.


Assuntos
Transtorno do Espectro Autista , Biomarcadores , Estudos de Casos e Controles , Criança , Pré-Escolar , Feminino , Ácido Fólico , Humanos , Mães
5.
Surg Endosc ; 33(8): 2485-2494, 2019 08.
Artigo em Inglês | MEDLINE | ID: mdl-30334166

RESUMO

BACKGROUND: Physical and virtual surgical simulators are increasingly being used in training technical surgical skills. However, metrics such as completion time or subjective performance checklists often show poor correlation to transfer of skills into clinical settings. We hypothesize that non-invasive brain imaging can objectively differentiate and classify surgical skill transfer, with higher accuracy than established metrics, for subjects based on motor skill levels. STUDY DESIGN: 18 medical students at University at Buffalo were randomly assigned into control, physical surgical trainer, or virtual trainer groups. Training groups practiced a surgical technical task on respective simulators for 12 consecutive days. To measure skill transfer post-training, all subjects performed the technical task in an ex-vivo environment. Cortical activation was measured using functional near-infrared spectroscopy (fNIRS) in the prefrontal cortex, primary motor cortex, and supplementary motor area, due to their direct impact on motor skill learning. RESULTS: Classification between simulator trained and untrained subjects based on traditional metrics is poor, where misclassification errors range from 20 to 41%. Conversely, fNIRS metrics can successfully classify physical or virtual trained subjects from untrained subjects with misclassification errors of 2.2% and 8.9%, respectively. More importantly, untrained subjects are successfully classified from physical or virtual simulator trained subjects with misclassification errors of 2.7% and 9.1%, respectively. CONCLUSION: fNIRS metrics are significantly more accurate than current established metrics in classifying different levels of surgical motor skill transfer. Our approach brings robustness, objectivity, and accuracy in validating the effectiveness of future surgical trainers in translating surgical skills to clinically relevant environments.


Assuntos
Encéfalo/diagnóstico por imagem , Competência Clínica , Simulação por Computador , Educação Médica/métodos , Neuroimagem/métodos , Neurocirurgia/educação , Estudantes de Medicina , Adulto , Feminino , Humanos , Aprendizagem , Masculino , Interface Usuário-Computador
6.
J Biomech Eng ; 141(10)2019 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-30901383

RESUMO

This paper presents in vivo mechanical characterization of the muscularis, submucosa, and mucosa of the porcine stomach wall under large deformation loading. This is particularly important for the development of gastrointestinal pathology-specific surgical intervention techniques. The study is based on testing the cardiac and fundic glandular stomach regions using a custom-developed compression ultrasound elastography system. Particular attention has been paid to elucidate the heterogeneity and anisotropy of tissue response. A Fung hyperelastic material model has been used to model the mechanical response of each tissue layer. A univariate analysis comparing the initial shear moduli of the three layers indicates that the muscularis (5.69 ± 4.06 kPa) is the stiffest followed by the submucosa (3.04 ± 3.32 kPa) and the mucosa (0.56 ± 0.28 kPa). The muscularis is found to be strongly distinguishable from the mucosa tissue in the cardiac and fundic regions based on a multivariate discriminant analysis. The cardiac muscularis is observed to be stiffer than the fundic muscularis tissue (shear moduli of 7.96 ± 3.82 kPa versus 3.42 ± 2.96 kPa), more anisotropic (anisotropic parameter of 2.21 ± 0.77 versus 1.41 ± 0.38), and strongly distinguishable from its fundic counterpart. The results are consistent with the tissue morphology and are in accordance with our previous ex vivo tissue study. Finally, a univariate comparison of the in vivo and ex vivo initial shear moduli for each layer shows that the muscularis and submucosa tissues are softer while in vivo, but the mucosa tissue is stiffer while in vivo. The results concerning the mechanical properties highlight the inhomogeneity and anisotropy of multilayer stomach tissue.

7.
PLoS Comput Biol ; 13(3): e1005385, 2017 03.
Artigo em Inglês | MEDLINE | ID: mdl-28301476

RESUMO

The number of diagnosed cases of Autism Spectrum Disorders (ASD) has increased dramatically over the last four decades; however, there is still considerable debate regarding the underlying pathophysiology of ASD. This lack of biological knowledge restricts diagnoses to be made based on behavioral observations and psychometric tools. However, physiological measurements should support these behavioral diagnoses in the future in order to enable earlier and more accurate diagnoses. Stepping towards this goal of incorporating biochemical data into ASD diagnosis, this paper analyzes measurements of metabolite concentrations of the folate-dependent one-carbon metabolism and transulfuration pathways taken from blood samples of 83 participants with ASD and 76 age-matched neurotypical peers. Fisher Discriminant Analysis enables multivariate classification of the participants as on the spectrum or neurotypical which results in 96.1% of all neurotypical participants being correctly identified as such while still correctly identifying 97.6% of the ASD cohort. Furthermore, kernel partial least squares is used to predict adaptive behavior, as measured by the Vineland Adaptive Behavior Composite score, where measurement of five metabolites of the pathways was sufficient to predict the Vineland score with an R2 of 0.45 after cross-validation. This level of accuracy for classification as well as severity prediction far exceeds any other approach in this field and is a strong indicator that the metabolites under consideration are strongly correlated with an ASD diagnosis but also that the statistical analysis used here offers tremendous potential for extracting important information from complex biochemical data sets.


Assuntos
Transtorno do Espectro Autista/sangue , Transtorno do Espectro Autista/diagnóstico , Metilação de DNA/imunologia , Ácido Fólico/sangue , Análise Multivariada , Estresse Oxidativo/imunologia , Transtorno do Espectro Autista/imunologia , Biomarcadores/sangue , Criança , Pré-Escolar , Interpretação Estatística de Dados , Feminino , Humanos , Masculino , Reprodutibilidade dos Testes , Fatores de Risco , Sensibilidade e Especificidade
8.
J Xray Sci Technol ; 26(5): 707-726, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-29991154

RESUMO

BACKGROUND: X-ray CT/micro-CT methods with photon-counting detectors (PCDs) and high Z materials are a hot research topic. One method using PCDs allows for spectral imaging in 5 energy windows while conventional X-ray detectors only collect energy-integrating data. OBJECTIVE: To demonstrate the enhanced separation of contrast materials by using PCDs, multivariate analysis, and linear discriminant methods. METHODS: Phantoms containing iodine and aqueous nanomaterials were scanned on a MARS spectral micro-CT. Image volumes were segmented into separate material-specific populations. Contrast comparisons were made by calculating T2 test statistics in the univariate, pseudo-conventional and multivariate, spectral CT data sets. Separability after Fisher discriminant analysis (FDA) was also assessed. RESULTS: The T2 values calculated for material comparisons increased as a result of the spectral expansion. The majority of the tested contrast agents showed increased T2 values by a factor of ∼2 -3. The total significant T2 statistics in the pure and mixed lanthanide image sets increased in the spectral data set. CONCLUSION: This work consolidates the groundwork for photon-counting-based material decomposition with micro-CT, facilitating future development of novel nanomaterials and their preclinical applications.


Assuntos
Nanopartículas/química , Microtomografia por Raio-X/instrumentação , Microtomografia por Raio-X/métodos , Algoritmos , Meios de Contraste , Desenho de Equipamento , Iodo , Imagens de Fantasmas , Fótons
9.
Int J Cancer ; 135(4): 843-61, 2014 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-24458546

RESUMO

Pancreatic ductal adenocarcinoma (PDAC) still ranking 4th in the order of fatal tumor diseases is characterized by a profound tumor stroma with high numbers of tumor-associated macrophages (TAMs). Driven by environmental factors, monocytes differentiate into M1- or M2-macrophages, the latter commonly regarded as being protumorigenic. Because a detailed analysis of TAMs in human PDAC development is still lacking, freshly isolated PDAC-derived TAMs were analyzed for their phenotype and impact on epithelial-mesenchymal-transition (EMT) of benign (H6c7) and malignant (Colo357) pancreatic ductal epithelial cells. TAMs exhibited characteristics of M1-macrophages (expression of HLA-DR, IL-1ß, or TNF-α) and M2-macrophages (expression of CD163 and IL-10). In the presence of TAMs, H6c7, and Colo357 cells showed an elongated cell shape along with an increased expression of mesenchymal markers such as vimentin and reduced expression of epithelial E-cadherin. Similar to TAMs, in vitro generated M1- and M2-macrophages both mediated EMT in H6c7 and Colo357 cells. M1-macrophages acquired M2-characteristics during coculture that could be prevented by GM-CSF treatment. However, M1-macrophages still potently induced EMT in H6c7 and Colo357 cells although lacking M2-characteristics. Overall, these data demonstrate that TAMs exhibit anti- as well as proinflammatory properties that equally contribute to EMT induction in PDAC initiation and development.


Assuntos
Carcinoma Ductal Pancreático/metabolismo , Regulação Neoplásica da Expressão Gênica , Macrófagos/patologia , Neoplasias Pancreáticas/metabolismo , Adulto , Idoso , Antígenos CD/metabolismo , Antígenos de Diferenciação Mielomonocítica/metabolismo , Caderinas/metabolismo , Carcinogênese , Carcinoma Ductal Pancreático/patologia , Linhagem Celular Tumoral , Forma Celular , Transformação Celular Neoplásica/patologia , Técnicas de Cocultura , Neoplasias do Colo/metabolismo , Transição Epitelial-Mesenquimal , Feminino , Fator Estimulador de Colônias de Granulócitos e Macrófagos/metabolismo , Humanos , Inflamação , Interleucina-10/metabolismo , Interleucina-1beta/metabolismo , Macrófagos/citologia , Macrófagos/metabolismo , Masculino , Pessoa de Meia-Idade , Metástase Neoplásica , Neoplasias Pancreáticas/patologia , Fenótipo , Receptores de Superfície Celular/metabolismo , Células Estromais/citologia , Fator de Necrose Tumoral alfa/metabolismo
10.
Sci Rep ; 14(1): 11096, 2024 05 15.
Artigo em Inglês | MEDLINE | ID: mdl-38750077

RESUMO

Skin tissue is recognized to exhibit rate-dependent mechanical behavior under various loading conditions. Here, we report that the full-thickness burn human skin exhibits rate-independent behavior under uniaxial tensile loading conditions. Mechanical properties, namely, ultimate tensile stress, ultimate tensile strain, and toughness, and parameters of Veronda-Westmann hyperelastic material law were assessed via uniaxial tensile tests. Univariate hypothesis testing yielded no significant difference (p > 0.01) in the distributions of these properties for skin samples loaded at three different rates of 0.3 mm/s, 2 mm/s, and 8 mm/s. Multivariate multiclass classification, employing a logistic regression model, failed to effectively discriminate samples loaded at the aforementioned rates, with a classification accuracy of only 40%. The median values for ultimate tensile stress, ultimate tensile strain, and toughness are computed as 1.73 MPa, 1.69, and 1.38 MPa, respectively. The findings of this study hold considerable significance for the refinement of burn care training protocols and treatment planning, shedding new light on the unique, rate-independent behavior of burn skin.


Assuntos
Queimaduras , Pele , Estresse Mecânico , Resistência à Tração , Humanos , Fenômenos Biomecânicos , Masculino , Feminino , Pessoa de Meia-Idade , Adulto , Elasticidade , Fenômenos Fisiológicos da Pele
11.
Sci Rep ; 13(1): 1038, 2023 01 19.
Artigo em Inglês | MEDLINE | ID: mdl-36658186

RESUMO

To ensure satisfactory clinical outcomes, surgical skill assessment must be objective, time-efficient, and preferentially automated-none of which is currently achievable. Video-based assessment (VBA) is being deployed in intraoperative and simulation settings to evaluate technical skill execution. However, VBA is manual, time-intensive, and prone to subjective interpretation and poor inter-rater reliability. Herein, we propose a deep learning (DL) model that can automatically and objectively provide a high-stakes summative assessment of surgical skill execution based on video feeds and low-stakes formative assessment to guide surgical skill acquisition. Formative assessment is generated using heatmaps of visual features that correlate with surgical performance. Hence, the DL model paves the way for the quantitative and reproducible evaluation of surgical tasks from videos with the potential for broad dissemination in surgical training, certification, and credentialing.


Assuntos
Aprendizado Profundo , Reprodutibilidade dos Testes , Simulação por Computador , Certificação , Competência Clínica
12.
J Pers Med ; 13(10)2023 Oct 21.
Artigo em Inglês | MEDLINE | ID: mdl-37888124

RESUMO

Autism spectrum disorder (ASD), characterized by social, communication, and behavioral abnormalities, affects 1 in 36 children according to the CDC. Several co-occurring conditions are often associated with ASD, including sleep and immune disorders and gastrointestinal (GI) problems. ASD is also associated with sensory sensitivities. Some individuals with ASD exhibit episodes of challenging behaviors that can endanger themselves or others, including aggression and self-injurious behavior (SIB). In this work, we explored the use of artificial intelligence models to predict behavior episodes based on past data of co-occurring conditions and environmental factors for 80 individuals in a residential setting. We found that our models predict occurrences of behavior and non-behavior with accuracies as high as 90% for some individuals, and that environmental, as well as gastrointestinal, factors are notable predictors across the population examined. While more work is needed to examine the underlying connections between the factors and the behaviors, having reasonably accurate predictions for behaviors has the potential to improve the quality of life of some individuals with ASD.

13.
J Mech Behav Biomed Mater ; 141: 105778, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-36965215

RESUMO

This article develops statistical machine learning models to predict the mechanical properties of skin tissue subjected to thermal injury based on the Raman spectra associated with conformational changes of the molecules in the burned tissue. Ex vivo porcine skin tissue samples were exposed to controlled burn conditions at 200 °F for five different durations: (i) 10s, (ii) 20s, (iii) 30s, (iv) 40s, and (v) 50s. For each burn condition, Raman spectra of wavenumbers 500-2000 cm-1 were measured from the tissue samples, and tensile testing on the same samples yielded their material properties, including, ultimate tensile strain, ultimate tensile stress, and toughness. Partial least squares regression models were established such that the Raman spectra, describing conformational changes in the tissue, could accurately predict ultimate tensile stress, toughness, and ultimate tensile strain of the burned skin tissues with R2 values of 0.8, 0.8, and 0.7, respectively, using leave-two-out cross validation scheme. An independent assessment of the resultant models showed that amino acids, proteins & lipids, and amide III components of skin tissue significantly influence the prediction of the properties of the burned skin tissue. In contrast, amide I has a lesser but still noticeable effect. These results are consistent with similar observations found in the literature on the mechanical characterization of burned skin tissue.


Assuntos
Amidas , Pele , Animais , Suínos , Análise dos Mínimos Quadrados , Aprendizado de Máquina
14.
iScience ; 26(7): 107229, 2023 Jul 21.
Artigo em Inglês | MEDLINE | ID: mdl-37519903

RESUMO

Genomics and proteomics have been central to identify tumor cell populations, but more accurate approaches to classify cell subtypes are still lacking. We propose a new methodology to accurately classify cancer cells based on their organelle spatial topology. Herein, we developed an organelle topology-based cell classification pipeline (OTCCP), which integrates artificial intelligence (AI) and imaging quantification to analyze organelle spatial distribution and inter-organelle topology. OTCCP was used to classify a panel of human breast cancer cells, grown as 2D monolayer or 3D tumor spheroids using early endosomes, mitochondria, and their inter-organelle contacts. Organelle topology allows for a highly precise differentiation between cell lines of different subtypes and aggressiveness. These findings lay the groundwork for using organelle topological profiling as a fast and efficient method for phenotyping breast cancer function as well as a discovery tool to advance our understanding of cancer cell biology at the subcellular level.

15.
J Pers Med ; 12(8)2022 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-36013263

RESUMO

There has been a rapid increase in the number of artificial intelligence (AI)/machine learning (ML)-based biomarker diagnostic classifiers in recent years. However, relatively little work has focused on assessing the robustness of these biomarkers, i.e., investigating the uncertainty of the AI/ML models that these biomarkers are based upon. This paper addresses this issue by proposing a framework to evaluate the already-developed classifiers with regard to their robustness by focusing on the variability of the classifiers' performance and changes in the classifiers' parameter values using factor analysis and Monte Carlo simulations. Specifically, this work evaluates (1) the importance of a classifier's input features and (2) the variability of a classifier's output and model parameter values in response to data perturbations. Additionally, it was found that one can estimate a priori how much replacement noise a classifier can tolerate while still meeting accuracy goals. To illustrate the evaluation framework, six different AI/ML-based biomarkers are developed using commonly used techniques (linear discriminant analysis, support vector machines, random forest, partial-least squares discriminant analysis, logistic regression, and multilayer perceptron) for a metabolomics dataset involving 24 measured metabolites taken from 159 study participants. The framework was able to correctly predict which of the classifiers should be less robust than others without recomputing the classifiers itself, and this prediction was then validated in a detailed analysis.

16.
J Neural Eng ; 19(3)2022 06 06.
Artigo em Inglês | MEDLINE | ID: mdl-35580576

RESUMO

Objective.Nerve guidance scaffolds containing anisotropic architectures provide topographical cues to direct regenerating axons through an injury site to reconnect the proximal and distal end of an injured nerve or spinal cord. Previousin vitrocultures of individual neurons revealed that fiber characteristics such as fiber diameter and inter-fiber spacing alter neurite morphological features, such as total neurite length, the longest single neurite, branching density, and the number of primary neurites. However, the relationships amongst these four neurite morphological features have never been studied on fibrous topographies using multivariate analysis.Approach.In this study, we cultured dissociated dorsal root ganglia on aligned, fibrous scaffolds and flat, isotropic films and evaluated the univariate and multivariate differences amongst these four neurite morphological features.Main results.Univariate analysis showed that fibrous scaffolds increase the length of the longest neurite and decrease branching density compared to film controls. Further, multivariate analysis revealed that, regardless of scaffold type, overall neurite length increases due to a compromise between the longest extending neurite, branching density, and the number of primary neurites. Additionally, multivariate analysis indicated that neurite branching is more independent of the other neurite features when neurons were cultured on films but that branching is strongly related to the other neurite features when cultured on fibers.Significance.These findings are significant as they are the first evidence that aligned topographies affect the relationships between neurite morphological features. This study provides a foundation for analyzing how individual neurite morphology may relate to neural regeneration on a macroscopic scale and provide information that may be used to optimize nerve guidance scaffolds.


Assuntos
Gânglios Espinais , Neuritos , Células Cultivadas , Gânglios Espinais/fisiologia , Análise Multivariada , Regeneração Nervosa/fisiologia , Neuritos/fisiologia , Neurônios/fisiologia , Poliésteres , Alicerces Teciduais
17.
Neurophotonics ; 9(4): 041406, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-35475257

RESUMO

Significance: Functional near-infrared spectroscopy (fNIRS), a well-established neuroimaging technique, enables monitoring cortical activation while subjects are unconstrained. However, motion artifact is a common type of noise that can hamper the interpretation of fNIRS data. Current methods that have been proposed to mitigate motion artifacts in fNIRS data are still dependent on expert-based knowledge and the post hoc tuning of parameters. Aim: Here, we report a deep learning method that aims at motion artifact removal from fNIRS data while being assumption free. To the best of our knowledge, this is the first investigation to report on the use of a denoising autoencoder (DAE) architecture for motion artifact removal. Approach: To facilitate the training of this deep learning architecture, we (i) designed a specific loss function and (ii) generated data to mimic the properties of recorded fNIRS sequences. Results: The DAE model outperformed conventional methods in lowering residual motion artifacts, decreasing mean squared error, and increasing computational efficiency. Conclusion: Overall, this work demonstrates the potential of deep learning models for accurate and fast motion artifact removal in fNIRS data.

18.
Sci Rep ; 12(1): 4565, 2022 03 16.
Artigo em Inglês | MEDLINE | ID: mdl-35296755

RESUMO

Porcine skin is considered a de facto surrogate for human skin. However, this study shows that the mechanical characteristics of full thickness burned human skin are different from those of porcine skin. The study relies on five mechanical properties obtained from uniaxial tensile tests at loading rates relevant to surgery: two parameters of the Veronda-Westmann hyperelastic material model, ultimate tensile stress, ultimate tensile strain, and toughness of the skin samples. Univariate statistical analyses show that human and porcine skin properties are dissimilar (p < 0.01) for each loading rate. Multivariate classification involving the five mechanical properties using logistic regression can successfully separate the two skin types with a classification accuracy exceeding 95% for each loading rate individually as well as combined. The findings of this study are expected to guide the development of effective training protocols and high-fidelity simulators to train burn care providers.


Assuntos
Pele , Animais , Fenômenos Biomecânicos , Humanos , Estresse Mecânico , Suínos , Resistência à Tração
19.
Sci Rep ; 12(1): 21398, 2022 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-36496535

RESUMO

This work compares the mechanical response of synthetic tissues used in burn care simulators from ten different manufacturers with that of ex vivo full thickness burned porcine skin as a surrogate for human skin tissues. This is of high practical importance since incorrect mechanical properties of synthetic tissues may introduce a negative bias during training due to the inaccurate haptic feedback from burn care simulator. A negative training may result in inadequately performed procedures, such as in escharotomy, which may lead to muscle necrosis endangering life and limb. Accurate haptic feedback in physical simulators is necessary to improve the practical training of non-expert providers for pre-deployment/pre-hospital burn care. With the U.S. Army's emerging doctrine of prolonged field care, non-expert providers must be trained to perform even invasive burn care surgical procedures when indicated. The comparison reported in this article is based on the ultimate tensile stress, ultimate tensile strain, and toughness that are measured at strain rates relevant to skin surgery. A multivariate analysis using logistic regression reveals significant differences in the mechanical properties of the synthetic and the porcine skin tissues. The synthetic and porcine skin tissues show a similar rate dependent behavior. The findings of this study are expected to guide the development of high-fidelity burn care simulators for the pre-deployment/pre-hospital burn care provider education.


Assuntos
Retroalimentação , Humanos , Suínos , Animais
20.
Burns ; 47(4): 812-820, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-32928613

RESUMO

Accurate classification of burn severities is of vital importance for proper burn treatments. A recent article reported that using the combination of Raman spectroscopy and optical coherence tomography (OCT) classifies different degrees of burns with an overall accuracy of 85% [1]. In this study, we demonstrate the feasibility of using Raman spectroscopy alone to classify burn severities on ex vivo porcine skin tissues. To create different levels of burns, four burn conditions were designed: (i) 200°F for 10s, (ii) 200°F for 30s, (iii) 450°F for 10s and (iv) 450°F for 30s. Raman spectra from 500-2000cm-1 were collected from samples of the four burn conditions as well as the unburnt condition. Classifications were performed using kernel support vector machine (KSVM) with features extracted from the spectra by principal component analysis (PCA), and partial least-square (PLS). Both techniques yielded an average accuracy of approximately 92%, which was independently evaluated by leave-one-out cross-validation (LOOCV). By comparison, PCA+KSVM provides higher accuracy in classifying severe burns, while PLS performs better in classifying mild burns. Variable importance in the projection (VIP) scores from the PLS models reveal that proteins and lipids, amide III, and amino acids are important indicators in separating unburnt or mild burns (200°F), while amide I has a more pronounced impact in separating severe burns (450°F).


Assuntos
Queimaduras/diagnóstico por imagem , Análise Espectral Raman/normas , Queimaduras/complicações , Humanos , Análise de Componente Principal , Índice de Gravidade de Doença , Análise Espectral Raman/métodos , Máquina de Vetores de Suporte/normas , Máquina de Vetores de Suporte/estatística & dados numéricos
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