Detalhe da pesquisa
1.
Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer.
Cell
; 186(2): 363-381.e19, 2023 01 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-36669472
2.
Molecular cartography uncovers evolutionary and microenvironmental dynamics in sporadic colorectal tumors.
Cell
; 186(25): 5620-5637.e16, 2023 12 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-38065082
3.
Deciphering the cancer microenvironment from bulk data with EcoTyper.
Cell
; 184(21): 5306-5308, 2021 10 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-34653367
4.
The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution.
Cell
; 181(2): 236-249, 2020 04 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-32302568
5.
Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities.
Cell
; 177(4): 1035-1049.e19, 2019 05 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-31031003
6.
Oncogenic K-Ras suppresses global miRNA function.
Mol Cell
; 83(14): 2509-2523.e13, 2023 07 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-37402366
7.
Intestinal Tuft Cells: Morphology, Function, and Implications for Human Health.
Annu Rev Physiol
; 86: 479-504, 2024 Feb 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-37863104
8.
Automated quality control and cell identification of droplet-based single-cell data using dropkick.
Genome Res
; 31(10): 1742-1752, 2021 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-33837131
9.
Dysplastic Stem Cell Plasticity Functions as a Driving Force for Neoplastic Transformation of Precancerous Gastric Mucosa.
Gastroenterology
; 163(4): 875-890, 2022 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35700772
10.
Single-Cell Transcriptomics Reveals a Conserved Metaplasia Program in Pancreatic Injury.
Gastroenterology
; 162(2): 604-620.e20, 2022 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-34695382
11.
Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images.
Bioinformatics
; 38(6): 1700-1707, 2022 03 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-34983062
12.
Combinatorial Transcriptional Profiling of Mouse and Human Enteric Neurons Identifies Shared and Disparate Subtypes In Situ.
Gastroenterology
; 160(3): 755-770.e26, 2021 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33010250
13.
MIRIAM: A machine and deep learning single-cell segmentation and quantification pipeline for multi-dimensional tissue images.
Cytometry A
; 101(6): 521-528, 2022 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-35084791
14.
DSS-induced damage to basement membranes is repaired by matrix replacement and crosslinking.
J Cell Sci
; 132(7)2019 04 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-30837285
15.
Use of Single-Cell -Omic Technologies to Study the Gastrointestinal Tract and Diseases, From Single Cell Identities to Patient Features.
Gastroenterology
; 159(2): 453-466.e1, 2020 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-32417404
16.
Succinate Produced by Intestinal Microbes Promotes Specification of Tuft Cells to Suppress Ileal Inflammation.
Gastroenterology
; 159(6): 2101-2115.e5, 2020 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-32828819
17.
Quantitative assessment of cell population diversity in single-cell landscapes.
PLoS Biol
; 16(10): e2006687, 2018 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-30346945
18.
Dual indexed library design enables compatibility of in-Drop single-cell RNA-sequencing with exAMP chemistry sequencing platforms.
BMC Genomics
; 21(1): 456, 2020 Jul 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-32616006
19.
pyNVR: investigating factors affecting feature selection from scRNA-seq data for lineage reconstruction.
Bioinformatics
; 35(13): 2335-2337, 2019 07 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30445607
20.
scRNABatchQC: multi-samples quality control for single cell RNA-seq data.
Bioinformatics
; 35(24): 5306-5308, 2019 12 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-31373345